FC875325
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875325 vs. ExPASy Swiss-Prot
Match: CBWD2_HUMAN (COBW domain-containing protein 2 OS=Homo sapiens GN=CBWD2 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.969e-17 Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 1 Query: 412 RIPATIITGFLGSGKTTLLNHILTAEHGKRIAVIENEYGEVDIDGSLVAAKTTGA--EDIVLLNNGCLCCTVRGDLVRMISELVSKK 666 +IP TIITG+LG+GKTTLLN+ILT +H KR+AVI NE+GE +A G E+ + L NGCLCC+V+ + +R I L+ KK Sbjct: 41 KIPVTIITGYLGAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDNGLRAIENLMQKK 127 HSP 2 Score: 21.1718 bits (43), Expect = 4.969e-17 Identity = 7/11 (63.64%), Postives = 11/11 (100.00%), Query Frame = 3 Query: 663 KEGKFDHIVIE 695 K+GKFD+I++E Sbjct: 126 KKGKFDYILLE 136
BLAST of FC875325 vs. ExPASy Swiss-Prot
Match: COBW_PSEAE (Protein cobW OS=Pseudomonas aeruginosa GN=cobW PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.065e-17 Identity = 44/98 (44.90%), Postives = 64/98 (65.31%), Query Frame = 1 Query: 412 RIPATIITGFLGSGKTTLLNHILTAEHGKRIAVIENEYGEVDIDGSLVAAKTTGAED------IVLLNNGCLCCTVRGDLVRMISELVSKKKGNSTIL 687 ++P TI+TGFLG+GKTTLL H+L G+RIAVI NE+GE+ IDG ++ + G + + L NGCLCCTV+ + ++ ELV+++ IL Sbjct: 31 KLPVTIVTGFLGAGKTTLLRHMLDNAEGRRIAVIVNEFGELGIDGEILKQCSIGCSEEEAQGRVFELANGCLCCTVQEEFFPVMRELVARRGDLDQIL 128
BLAST of FC875325 vs. ExPASy Swiss-Prot
Match: CBWD1_HUMAN (COBW domain-containing protein 1 OS=Homo sapiens GN=CBWD1 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 6.460e-17 Identity = 45/87 (51.72%), Postives = 59/87 (67.82%), Query Frame = 1 Query: 412 RIPATIITGFLGSGKTTLLNHILTAEHGKRIAVIENEYGEVDIDGSLVAAKTTGA--EDIVLLNNGCLCCTVRGDLVRMISELVSKK 666 +IP TIITG+LG+GKTTLLN+ILT +H KR+AVI NE+GE +A G E+ + L NGCLCC+V+ +R I L+ KK Sbjct: 41 KIPVTIITGYLGAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDSGLRAIENLMQKK 127 HSP 2 Score: 21.1718 bits (43), Expect = 6.460e-17 Identity = 7/11 (63.64%), Postives = 11/11 (100.00%), Query Frame = 3 Query: 663 KEGKFDHIVIE 695 K+GKFD+I++E Sbjct: 126 KKGKFDYILLE 136
BLAST of FC875325 vs. ExPASy Swiss-Prot
Match: YJIA_ECOLI (Uncharacterized GTP-binding protein yjiA OS=Escherichia coli (strain K12) GN=yjiA PE=1 SV=3) HSP 1 Score: 87.4261 bits (215), Expect = 8.640e-17 Identity = 44/90 (48.89%), Postives = 59/90 (65.56%), Query Frame = 1 Query: 409 NRIPATIITGFLGSGKTTLLNHILTAEHGKRIAVIENEYGEVDIDGSLVAAKTTGAEDIVLLNNGCLCCTVRGDLVRMISELVSK-KKGN 675 N I T++TGFLG+GKTTLL HIL +HG +IAVIENE+GEV +D L+ + T I L NGC+CC+ +L + +L+ KGN Sbjct: 2 NPIAVTLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVSVDDQLIGDRAT---QIKTLTNGCICCSRSNELEDALLDLLDNLDKGN 88
BLAST of FC875325 vs. ExPASy Swiss-Prot
Match: CBWD1_MOUSE (COBW domain-containing protein 1 OS=Mus musculus GN=Cbwd1 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.092e-16 Identity = 47/100 (47.00%), Postives = 64/100 (64.00%), Query Frame = 1 Query: 373 EDSDLLTKIPPDNRIPATIITGFLGSGKTTLLNHILTAEHGKRIAVIENEYGEVDIDGSLVAAKTTGA--EDIVLLNNGCLCCTVRGDLVRMISELVSKK 666 E+ D +TKIP TI+TG+LG+GKTTLLN+ILT +H ++IAVI NE+GE +A G E+ + L NGCLCC+V+ +R I L+ KK Sbjct: 32 ENLDFITKIP------VTIVTGYLGAGKTTLLNYILTEQHNRKIAVILNEFGEGSAVEKSLAVSQGGELYEEWLELRNGCLCCSVKDSGLRAIENLMQKK 125 HSP 2 Score: 21.1718 bits (43), Expect = 1.092e-16 Identity = 7/11 (63.64%), Postives = 11/11 (100.00%), Query Frame = 3 Query: 663 KEGKFDHIVIE 695 K+GKFD+I++E Sbjct: 124 KKGKFDYILLE 134
BLAST of FC875325 vs. ExPASy Swiss-Prot
Match: Y4527_DICDI (COBW domain-containing protein DDB_G0274527 OS=Dictyostelium discoideum GN=DDB_G0274527 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.128e-16 Identity = 43/108 (39.81%), Postives = 69/108 (63.89%), Query Frame = 1 Query: 394 KIPPDNRIPATIITGFLGSGKTTLLNHILTAEHGKRIAVIENEYGEVDIDGSLV----------AAKTTGAEDIVLLNNGCLCCTVRGDLVRMISELVSKKKGNSTIL 687 K+ ++P ++++GFLGSGKTTLLN+IL + HG +IAVI N+ EV+ID L+ A E +V ++NGC+CCT+R DL+ +++L +K+ + I+ Sbjct: 36 KVRGFEKLPVSVLSGFLGSGKTTLLNYILNSNHGLKIAVIVNDMSEVNIDSKLILENEFKITRTKATEKQVEAVVEMSNGCICCTMREDLLVEVTKLAKEKRFDYLII 143
BLAST of FC875325 vs. ExPASy Swiss-Prot
Match: P47K_PSECL (47 kDa protein OS=Pseudomonas chlororaphis PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.474e-16 Identity = 39/89 (43.82%), Postives = 62/89 (69.66%), Query Frame = 1 Query: 412 RIPATIITGFLGSGKTTLLNHILTAEHGKRIAVIENEYGEVDIDGSLVAAKTT---GAEDIVLLNNGCLCCTVRGDLVRMISELVSKKK 669 R+P T+++GFLG+GKTTLLN IL G R+AVI N+ EV++D V + G ++++ ++NGC+CCT+R DL+ IS+L +++ Sbjct: 9 RLPVTVLSGFLGAGKTTLLNAILRNRQGLRVAVIVNDMSEVNLDAESVQRDVSLHRGRDELIEMSNGCICCTLRADLLEQISDLARQQR 97
BLAST of FC875325 vs. ExPASy Swiss-Prot
Match: COBW_PSEDE (Protein cobW OS=Pseudomonas denitrificans GN=cobW PE=3 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 1.474e-16 Identity = 38/88 (43.18%), Postives = 63/88 (71.59%), Query Frame = 1 Query: 412 RIPATIITGFLGSGKTTLLNHILTAEHGKRIAVIENEYGEVDIDGSLV---AAKTTGAEDIVLLNNGCLCCTVRGDLVRMISELVSKK 666 +IPAT+ITGFLG+GKTT++ ++L GKRI +I NE+G++ +DG ++ A+ +DI+ L NGC+CCTV D + +++L+ ++ Sbjct: 10 KIPATVITGFLGAGKTTMIRNLLQNADGKRIGLIINEFGDLGVDGDVLKGCGAEACTEDDIIELTNGCICCTVADDFIPTMTKLLERE 97
BLAST of FC875325 vs. ExPASy Swiss-Prot
Match: CBWD6_HUMAN (COBW domain-containing protein 6 OS=Homo sapiens GN=CBWD6 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.283e-16 Identity = 45/87 (51.72%), Postives = 59/87 (67.82%), Query Frame = 1 Query: 412 RIPATIITGFLGSGKTTLLNHILTAEHGKRIAVIENEYGEVDIDGSLVAAKTTGA--EDIVLLNNGCLCCTVRGDLVRMISELVSKK 666 +IP TIITG+LG+GKTTLLN+ILT +H KR+AVI NE GE +A G E+ + L NGCLCC+V+ + +R I L+ KK Sbjct: 41 KIPVTIITGYLGAGKTTLLNYILTEQHSKRVAVILNESGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDNGLRAIENLMQKK 127
BLAST of FC875325 vs. ExPASy Swiss-Prot
Match: CBWD5_HUMAN (COBW domain-containing protein 5 OS=Homo sapiens GN=CBWD5 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.283e-16 Identity = 45/87 (51.72%), Postives = 59/87 (67.82%), Query Frame = 1 Query: 412 RIPATIITGFLGSGKTTLLNHILTAEHGKRIAVIENEYGEVDIDGSLVAAKTTGA--EDIVLLNNGCLCCTVRGDLVRMISELVSKK 666 +IP TIITG+LG+GKTTLLN+ILT +H KR+AVI NE GE +A G E+ + L NGCLCC+V+ + +R I L+ KK Sbjct: 41 KIPVTIITGYLGAGKTTLLNYILTEQHSKRVAVILNESGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDNGLRAIENLMQKK 127 The following BLAST results are available for this feature:
BLAST of FC875325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875325 ID=FC875325; Name=FC875325; organism=Citrus clementina; type=EST; length=738bpback to top |