FC875331
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875331 vs. ExPASy Swiss-Prot
Match: IF4E3_ARATH (Eukaryotic translation initiation factor 4E type 3 OS=Arabidopsis thaliana GN=At5g18110 PE=2 SV=1) HSP 1 Score: 318.931 bits (816), Expect = 1.544e-86 Identity = 152/205 (74.15%), Postives = 175/205 (85.37%), Query Frame = 2 Query: 44 MEITDKKESDINNTQTVADSVDNN---NKDAEERQARELKANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYSP 649 ME+ D+++ +I ++ + DS+ ++ + +EER++RELK HPL+ KF WYTRRTPGVR Q SYEDNIKK+V+FSTVEGFW CYCHLAR SLLPSPTDLH FK+GIRPLWED ANCNGGKWIIRF KVVS RFWEDL+LALVGDQLD DNICGAVLS+RFNEDI+SVWNRNASDHQAVM LRDSIKRHLKLPH+YVMEY P Sbjct: 1 MEVLDRRDDEIRDSGNM-DSIKSHYVTDSVSEERRSRELKDGDHPLRYKFSIWYTRRTPGVRNQ-SYEDNIKKMVEFSTVEGFWACYCHLARSSLLPSPTDLHFFKDGIRPLWEDGANCNGGKWIIRFSKVVSARFWEDLLLALVGDQLDDADNICGAVLSVRFNEDIISVWNRNASDHQAVMGLRDSIKRHLKLPHAYVMEYKP 203
BLAST of FC875331 vs. ExPASy Swiss-Prot
Match: IF4E2_HUMAN (Eukaryotic translation initiation factor 4E type 2 OS=Homo sapiens GN=EIF4E2 PE=1 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 6.773e-50 Identity = 94/200 (47.00%), Postives = 135/200 (67.50%), Query Frame = 2 Query: 56 DKKESDINNTQTVADSVD---NNNKDAEERQARELKANLHPLKNKFVFWYTRRTPGVRTQT-SYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEY 643 D +++ N+TQ + + N+ + +R+A HPL+ + FWY+RRTPG T + SYE NIK+I F++VE FW Y H+ RP L +D HLFKEGI+P+WED AN NGGKWIIR +K ++ R WE+L+LA++G+Q G+ ICGAV+S+RF EDI+S+WN+ ASD +RD+++R L LP + +MEY Sbjct: 15 DHDQNEENSTQKDGEKEKTERDKNQSSSKRKAVVPGPAEHPLQYNYTFWYSRRTPGRPTSSQSYEQNIKQIGTFASVEQFWRFYSHMVRPGDLTGHSDFHLFKEGIKPMWEDDANKNGGKWIIRLRKGLASRCWENLILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLNLPPNTIMEY 214
BLAST of FC875331 vs. ExPASy Swiss-Prot
Match: IF4E2_MOUSE (Eukaryotic translation initiation factor 4E type 2 OS=Mus musculus GN=Eif4e2 PE=1 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.362e-49 Identity = 93/200 (46.50%), Postives = 134/200 (67.00%), Query Frame = 2 Query: 56 DKKESDINNTQTVADSVDNNNKDAE---ERQARELKANLHPLKNKFVFWYTRRTPGVRTQT-SYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEY 643 D +++ N+TQ + + ++ +R+A HPL+ + FWY+RRTPG T + SYE NIK+I F++VE FW Y H+ RP L +D HLFKEGI+P+WED AN NGGKWIIR +K ++ R WE+L+LA++G+Q G+ ICGAV+S+RF EDI+S+WN+ ASD +RD+++R L LP + +MEY Sbjct: 15 DHDQNEENSTQKDGEKEKTDRDKSQSSGKRKAVVPGPAEHPLQYNYTFWYSRRTPGRPTSSQSYEQNIKQIGTFASVEQFWKFYSHMVRPGDLTGHSDFHLFKEGIKPMWEDDANKNGGKWIIRLRKGLASRCWENLILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLNLPPNTIMEY 214
BLAST of FC875331 vs. ExPASy Swiss-Prot
Match: IF4E4_CAEEL (Eukaryotic translation initiation factor 4E-4 OS=Caenorhabditis elegans GN=ife-4 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.465e-36 Identity = 69/160 (43.12%), Postives = 99/160 (61.88%), Query Frame = 2 Query: 164 HPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEY 643 H L+ + F Y R G Y ++ + +VE FW H RP+ + D+H FK G++P+WED ANC GGKWIIR KK +S R WE+L++A++G+Q GD +CGAV SIR EDI+S+WNRNA D +R++++ L+LP + V+EY Sbjct: 31 HQLQYSYTFSYFMRPTGKFDPEDYASYVQPVGIMKSVEQFWSIMVHFKRPTEMCDKADIHFFKTGVKPVWEDPANCKGGKWIIRLKKGLSTRIWENLLMAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRSVLQLPQNTVLEY 190
BLAST of FC875331 vs. ExPASy Swiss-Prot
Match: IF4E1_ARATH (Eukaryotic translation initiation factor 4E-1 OS=Arabidopsis thaliana GN=EIF4E1 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.468e-28 Identity = 62/156 (39.74%), Postives = 94/156 (60.26%), Query Frame = 2 Query: 164 HPLKNKFVFWYTRRTPGVRT-QTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHS 628 HPL++ + FW+ P V++ QTS+ +++ + FSTVE FW Y ++ PS L D + FK I P WED NGGKW + F K S + W +LAL+G+Q D+GD ICGAV++IR ++ +S+W +NAS+ A +++ K L +S Sbjct: 60 HPLEHSWTFWFDN--PAVKSKQTSWGSSLRPVFTFSTVEEFWSLYNNMKHPSKLAHGADFYCFKHIIEPKWEDPICANGGKWTMTFPKEKSDKSWLYTLLALIGEQFDHGDEICGAVVNIRGKQERISIWTKNASNEAAQVSIGKQWKEFLDYNNS 213
BLAST of FC875331 vs. ExPASy Swiss-Prot
Match: IF4E_DICDI (Eukaryotic translation initiation factor 4E OS=Dictyostelium discoideum GN=eif4e PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.243e-27 Identity = 71/211 (33.65%), Postives = 113/211 (53.55%), Query Frame = 2 Query: 50 ITDKKESDINNTQTV-ADSVDNNNKDA-------EERQARELKANL--HPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFK-KVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYSP 649 +T + + NNTQ ++ DN NK+ EE+Q E NL HPL+N++ WY ++ + + + D++KK++ F +VE FW + +L S L + HLFK+ I P WE +N GGKW + K K W V+A VG+ D D ICG V + R N D +SVW + A D +A + + +K+ L++ + ++Y+P Sbjct: 26 VTSETTTTTNNTQNKETETTDNINKEETADKENKEEQQQEENPENLIKHPLQNRWSLWYDYQSGKINPE-HWVDSLKKVISFDSVEDFWCVFNNLPNVSNLKQGSSYHLFKDDIEPKWEHESNKRGGKWFVMVKDKSRCDNQWLQSVMACVGETFDSSDEICGIVYNSRKNGDKISVWTKTAQDEKATRDVGNCLKKILEIDQT--IQYTP 233
BLAST of FC875331 vs. ExPASy Swiss-Prot
Match: IF4E1_WHEAT (Eukaryotic translation initiation factor 4E-1 OS=Triticum aestivum PE=1 SV=3) HSP 1 Score: 122.094 bits (305), Expect = 2.769e-27 Identity = 64/174 (36.78%), Postives = 93/174 (53.45%), Query Frame = 2 Query: 92 VADSVDNNNKDAEERQARELKANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHL 613 +AD D ++ A R HPL+N + FW+ G Q ++ I I FSTVE FW Y ++ PS L D H FK I P WED NGGKW I + S FW +LA++G+Q D+GD ICGAV+S+R ++ +++W +NA++ A +++ K L Sbjct: 22 IADDGDGSSAAAAGR------ITAHPLENAWTFWFDN-PQGKSRQVAWGSTIHPIHTFSTVEDFWGLYNNIHNPSKLNVGADFHCFKNKIEPKWEDPICANGGKWTISCGRGKSDTFWLHTLLAMIGEQFDFGDEICGAVVSVRQKQERVAIWTKNAANEAAQISIGKQWKEFL 188
BLAST of FC875331 vs. ExPASy Swiss-Prot
Match: IF4E_DROME (Eukaryotic translation initiation factor 4E OS=Drosophila melanogaster GN=eIF-4E PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.617e-27 Identity = 63/198 (31.82%), Postives = 100/198 (50.51%), Query Frame = 2 Query: 59 KKESDINNTQTVADSVDNNNKDAEERQARELKANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWII---RFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEY 643 K + D T A + A + R HPL N + WY S+ED +I F TVE FW Y H+ PS + +D LFK+ IRP+WED+AN GG+W+I + K W D++L L+G+ D+ D ICGAV++IR + +S+W + ++ +A + + ++ L+L + ++Y Sbjct: 46 KPKEDPQETGEPAGNTATTTAPAGDDAVRTEHLYKHPLMNVWTLWYLEND----RSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSLFKKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVINIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQY 239
BLAST of FC875331 vs. ExPASy Swiss-Prot
Match: IF4E3_CAEEL (Eukaryotic translation initiation factor 4E-3 OS=Caenorhabditis elegans GN=ife-3 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.169e-27 Identity = 59/165 (35.76%), Postives = 96/165 (58.18%), Query Frame = 2 Query: 164 HPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKK----VVSGRFWEDLVLALVGDQLD-YGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEY 643 HPL+N++ WY + +ED +K + F TVE FW Y H+ L +D +LFKEGI+P+WED N GG+W++ K + +W +L++A+VG+Q D YGD ICGAV+++R D +S+W R+A+ + + +K+ L +P + ++ Y Sbjct: 32 HPLQNRWALWYLKAD----RNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGGLNWGSDYYLFKEGIKPMWEDVNNVQGGRWLVVVDKQRRTQLLDHYWLELLMAIVGEQFDEYGDYICGAVVNVRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRY 192
BLAST of FC875331 vs. ExPASy Swiss-Prot
Match: IF4E1_ORYSJ (Eukaryotic translation initiation factor 4E-1 OS=Oryza sativa subsp. japonica GN=Os01g0970400 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.052e-26 Identity = 63/177 (35.59%), Postives = 94/177 (53.11%), Query Frame = 2 Query: 122 DAEERQARELK-------------ANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHL 613 DA+ER+ E+ A HPL++ + FW+ G Q ++ +I+ I FSTVE FW Y ++ PS L D H FK I P WED NGGKW + S W +LA++G+Q DYGD ICGAV+S+R ++ +++W +NA++ A +++ K L Sbjct: 25 DADEREEGEIADDDSGHAPPQANPAAPHPLEHAWTFWFDN-PQGKSKQATWGSSIRPIHTFSTVEDFWSLYNNIHHPSKLVVGADFHCFKNKIEPKWEDPICANGGKWTFSCGRGKSDTMWLHTLLAMIGEQFDYGDEICGAVVSVRGKQERIAIWTKNAANEAAQISIGKQWKEFL 200 The following BLAST results are available for this feature:
BLAST of FC875331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875331 ID=FC875331; Name=FC875331; organism=Citrus clementina; type=EST; length=687bpback to top |