FC875343
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875343 vs. ExPASy Swiss-Prot
Match: GH33_ARATH (Indole-3-acetic acid-amido synthetase GH3.3 OS=Arabidopsis thaliana GN=GH3.3 PE=1 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 7.290e-88 Identity = 161/213 (75.59%), Postives = 180/213 (84.51%), Query Frame = 3 Query: 3 IWPNTKYLDVIVTGAMAQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEPAHSFGLTSSDPQPVDLVDVEVGKEYQLVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIESDKTDEAKLQNAIDNASRLLREFNTNVGEYTICANTKTIPGHYVIYWELLIKDSANSPNNEVLNQCCL 641 IWPNTKYLDVIVTGAMAQYIP L+YYSGG LPMACTMYASSE YFG+NL P+C+PSEVSYTIMPNMAYFEFLP + + + V+L DVEVGKEY+LVITTYAGL RYRVGDIL+VTGF+NSAPQF FVRRKNVLLSIESDKTDEA+LQ+A++NAS LL E T V EYT A TKTIPGHYVIYWELL+KD N PN+EV+ +CCL Sbjct: 302 IWPNTKYLDVIVTGAMAQYIPMLEYYSGG-LPMACTMYASSESYFGINLKPMCKPSEVSYTIMPNMAYFEFLPHHE-----VPTEKSELVELADVEVGKEYELVITTYAGLNRYRVGDILQVTGFYNSAPQFKFVRRKNVLLSIESDKTDEAELQSAVENASLLLGEQGTRVIEYTSYAETKTIPGHYVIYWELLVKDQTNPPNDEVMARCCL 508
BLAST of FC875343 vs. ExPASy Swiss-Prot
Match: GH31_ARATH (Probable indole-3-acetic acid-amido synthetase GH3.1 OS=Arabidopsis thaliana GN=GH3.1 PE=2 SV=1) HSP 1 Score: 319.701 bits (818), Expect = 8.060e-87 Identity = 158/214 (73.83%), Postives = 181/214 (84.58%), Query Frame = 3 Query: 3 IWPNTKYLDVIVTGAMAQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEPAHSFGLTSSDPQPVDLVDVEVGKEYQLVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIESDKTDEAKLQNAIDNASRLL-REFNTNVGEYTICANTKTIPGHYVIYWELLIKDSANSPNNEVLNQCCL 641 IWPNTKYLDVIVTGAMAQYIPTL+YYSGG LPMACTMYASSECYFGLNLNP+ +PSEVSYTIMPNMAYFEF+P G T + V+LVDV +GKEY+LV+TTYAGL RYRVGDILRVTGFHNSAPQFHFVRRKNVLLSI+SDKTDE++LQ A++NAS +L E + V EYT A+T TIPGHYV+YWELL++D A P++E L +CCL Sbjct: 300 IWPNTKYLDVIVTGAMAQYIPTLEYYSGG-LPMACTMYASSECYFGLNLNPMSKPSEVSYTIMPNMAYFEFIP------LGGTKA----VELVDVNIGKEYELVVTTYAGLCRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIDSDKTDESELQKAVENASSILHEECGSRVAEYTSYADTSTIPGHYVLYWELLVRDGARQPSHETLTRCCL 502
BLAST of FC875343 vs. ExPASy Swiss-Prot
Match: GH34_ARATH (Indole-3-acetic acid-amido synthetase GH3.4 OS=Arabidopsis thaliana GN=GH3.4 PE=1 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 2.593e-85 Identity = 158/214 (73.83%), Postives = 181/214 (84.58%), Query Frame = 3 Query: 3 IWPNTKYLDVIVTGAMAQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEPAHSFGLTSSDPQPVDLVDVEVGKEYQLVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIESDKTDEAKLQNAIDNASRLLREFNTNVGEYTICANTKTIPGHYVIYWELLIKDSANS-PNNEVLNQCCL 641 IWPNTKYLDVIVTGAMA+YIP L+YYSGG LPMA +YASSE YFG+NLNP+C+PSEVSYTI PNMAYFEFLP G+ ++ V+L DVEVGKEY+LVITTYAGLYRYRVGDILRVTGFHNSAPQF F+RR+NVLLSIESDKTDEA LQ A++NASRLL E T V EYT A+TKTIPGHYVIYWELL +D +N+ P++EV+ +CCL Sbjct: 300 IWPNTKYLDVIVTGAMAEYIPMLEYYSGG-LPMASMIYASSESYFGINLNPMCKPSEVSYTIFPNMAYFEFLPHNHDGDGGVEATSL--VELADVEVGKEYELVITTYAGLYRYRVGDILRVTGFHNSAPQFKFIRRENVLLSIESDKTDEADLQKAVENASRLLAEQGTRVIEYTSYADTKTIPGHYVIYWELLSRDQSNALPSDEVMAKCCL 510
BLAST of FC875343 vs. ExPASy Swiss-Prot
Match: GH32_ARATH (Indole-3-acetic acid-amido synthetase GH3.2 OS=Arabidopsis thaliana GN=GH3.2 PE=1 SV=2) HSP 1 Score: 314.694 bits (805), Expect = 2.593e-85 Identity = 159/216 (73.61%), Postives = 179/216 (82.87%), Query Frame = 3 Query: 3 IWPNTKYLDVIVTGAMAQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEPAHSFGLTSS--DPQPVDLVDVEVGKEYQLVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIESDKTDEAKLQNAIDNASRLLREFNTNVGEYTICANTKTIPGHYVIYWELLIKDSANS-PNNEVLNQCCL 641 IWPNTKYLDVIVTGAMAQYIPTL+YYSGG LPMACTMYASSE YFG+NL P+C+PSEVSYTIMPNMAYFEFLP +S + V+L +VEVGKEY+LVITTYAGLYRYRVGDILRVTGFHNSAPQF F+RRKNVLLS+ESDKTDEA+LQ A++NASRL E T EYT A TKTIPGHYVIYWELL +D +N+ + EV+ +CCL Sbjct: 302 IWPNTKYLDVIVTGAMAQYIPTLEYYSGG-LPMACTMYASSESYFGINLKPMCKPSEVSYTIMPNMAYFEFLPHNHDGDGAAEASLDETSLVELANVEVGKEYELVITTYAGLYRYRVGDILRVTGFHNSAPQFKFIRRKNVLLSVESDKTDEAELQKAVENASRLFAEQGTRGIEYTSYAETKTIPGHYVIYWELLGRDQSNALMSEEVMAKCCL 516
BLAST of FC875343 vs. ExPASy Swiss-Prot
Match: GH38_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.8 OS=Oryza sativa subsp. japonica GN=GH3.8 PE=2 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 2.683e-82 Identity = 157/215 (73.02%), Postives = 174/215 (80.93%), Query Frame = 3 Query: 3 IWPNTKYLDVIVTGAMAQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEPAHSFGLTSSDP-QPVDLVDVEVGKEYQLVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIESDKTDEAKLQNAIDNASRLLREFNTNVGEYTICANTKTIPGHYVIYWELLIKDS-ANSPNNEVLNQCCL 641 +WPNTKYLDVIVTGAMAQYIPTL++YSGG LPMACTMYASSECYFGLNL P+C PSEVSYTIMPNM YFEFLP + G S D Q VDL VEVG+EY+LVITTYAGL RYRVGD+LRVTGFHN+APQF FVRRKNVLLSIESDKTDEA+LQ A++ AS LLR +V EYT A TK IPGHYVIYWELL K + A + + L +CCL Sbjct: 307 VWPNTKYLDVIVTGAMAQYIPTLEFYSGG-LPMACTMYASSECYFGLNLRPMCDPSEVSYTIMPNMGYFEFLPVDET---GAASGDATQLVDLARVEVGREYELVITTYAGLNRYRVGDVLRVTGFHNAAPQFRFVRRKNVLLSIESDKTDEAELQRAVERASALLRPHGASVVEYTSQACTKRIPGHYVIYWELLTKGAGATVVDADTLGRCCL 517
BLAST of FC875343 vs. ExPASy Swiss-Prot
Match: GH38_ORYSI (Probable indole-3-acetic acid-amido synthetase GH3.8 OS=Oryza sativa subsp. indica GN=GH3.8 PE=2 SV=2) HSP 1 Score: 304.679 bits (779), Expect = 2.683e-82 Identity = 157/215 (73.02%), Postives = 174/215 (80.93%), Query Frame = 3 Query: 3 IWPNTKYLDVIVTGAMAQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEPAHSFGLTSSDP-QPVDLVDVEVGKEYQLVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIESDKTDEAKLQNAIDNASRLLREFNTNVGEYTICANTKTIPGHYVIYWELLIKDS-ANSPNNEVLNQCCL 641 +WPNTKYLDVIVTGAMAQYIPTL++YSGG LPMACTMYASSECYFGLNL P+C PSEVSYTIMPNM YFEFLP + G S D Q VDL VEVG+EY+LVITTYAGL RYRVGD+LRVTGFHN+APQF FVRRKNVLLSIESDKTDEA+LQ A++ AS LLR +V EYT A TK IPGHYVIYWELL K + A + + L +CCL Sbjct: 307 VWPNTKYLDVIVTGAMAQYIPTLEFYSGG-LPMACTMYASSECYFGLNLRPMCDPSEVSYTIMPNMGYFEFLPVDET---GAASGDATQLVDLARVEVGREYELVITTYAGLNRYRVGDVLRVTGFHNAAPQFRFVRRKNVLLSIESDKTDEAELQRAVERASALLRPHGASVVEYTSQACTKRIPGHYVIYWELLTKGAGATVVDADTLGRCCL 517
BLAST of FC875343 vs. ExPASy Swiss-Prot
Match: GH32_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.2 OS=Oryza sativa subsp. japonica GN=GH3.2 PE=2 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 3.280e-80 Identity = 147/220 (66.82%), Postives = 172/220 (78.18%), Query Frame = 3 Query: 3 IWPNTKYLDVIVTGAMAQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEP-AHSFGLTSSDPQPVDLVDVEVGKEYQLVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIESDKTDEAKLQNAIDNASRLLREFNTNVGEYTICANTKTIPGHYVIYWELLIKDS------ANSPNNEVLNQCCL 641 +WPNTKYLDVIVTGAMAQYIPTL +YSGG LPMACTMYASSECYFGLNL P+C PSEVSYTIMPNM YFE +P +P A + P+ VDL D EVG+EY+LVITTYAGL RYRVGDIL+VTGFHN+APQF FVRRKNVLLSI+SDKTDEA+LQ A++ AS LL + ++ EYT A+ TIPGHYV+YWEL++++ A V +CCL Sbjct: 311 MWPNTKYLDVIVTGAMAQYIPTLKFYSGG-LPMACTMYASSECYFGLNLRPMCDPSEVSYTIMPNMGYFELMPHDPDAPPLPRDAPPPRLVDLADAEVGREYELVITTYAGLCRYRVGDILQVTGFHNAAPQFRFVRRKNVLLSIDSDKTDEAELQAAVERASALLSPYGASIVEYTSQADATTIPGHYVVYWELMVREGGAWPPPAEEEGRGVFERCCL 529
BLAST of FC875343 vs. ExPASy Swiss-Prot
Match: GH36_ARATH (Indole-3-acetic acid-amido synthetase GH3.6 OS=Arabidopsis thaliana GN=GH3.6 PE=1 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 9.243e-75 Identity = 138/224 (61.61%), Postives = 171/224 (76.34%), Query Frame = 3 Query: 3 IWPNTKYLDVIVTGAMAQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEPAHSFGLTSSDPQP-----------VDLVDVEVGKEYQLVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIESDKTDEAKLQNAIDNASRLLREFNTNVGEYTICANTKTIPGHYVIYWELLIKDSANSPNNEVLNQCCL 641 +WPNTKY+DVIVTG M+QYIPTLDYYS G LP+ CTMYASSECYFG+NL P+C+PSEVSYT++PNMAYFEFLP + G+TSS P VDLVDV++G+EY+LV+TTYAGLYRYRVGD+L V GF N+APQF F+ RKNV+LSI+SDKTDE +LQNA+ NA L F+ ++ EYT A+T +IPGHYV++WEL + + P + V CCL Sbjct: 302 LWPNTKYVDVIVTGTMSQYIPTLDYYSNG-LPLVCTMYASSECYFGVNLRPLCKPSEVSYTLIPNMAYFEFLPVH--RNSGVTSSISLPKALTEKEQQELVDLVDVKLGQEYELVVTTYAGLYRYRVGDVLSVAGFKNNAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVTHLVPFDASLSEYTSYADTSSIPGHYVLFWELCLNGNTPIPPS-VFEDCCL 521
BLAST of FC875343 vs. ExPASy Swiss-Prot
Match: GH35_ARATH (Indole-3-acetic acid-amido synthetase GH3.5 OS=Arabidopsis thaliana GN=GH3.5 PE=1 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 5.991e-74 Identity = 138/225 (61.33%), Postives = 172/225 (76.44%), Query Frame = 3 Query: 3 IWPNTKYLDVIVTGAMAQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEPAHSFGLTSSDPQP-----------VDLVDVEVGKEYQLVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIESDKTDEAKLQNAIDNASRLLREFNTNVGEYTICANTKTIPGHYVIYWELLIKDSANSPNNEVLNQCCLA 644 +WPNTKY+DVIVTG M+QYIPTLDYYS G LP+ CTMYASSECYFG+NL P+C+PSEVSYT++P+MAYFEFLP + G+T+S P VDLVDV++G+EY+LV+TTYAGL RYRVGD+LRVTGF N APQF F+ RKNV+LSI+SDKTDE +LQNA+ NA L F+ ++ EYT A+T +IPGHYV++WEL + + P + V CCLA Sbjct: 302 LWPNTKYVDVIVTGTMSQYIPTLDYYSNG-LPLVCTMYASSECYFGVNLRPLCKPSEVSYTLIPSMAYFEFLPVH--RNNGVTNSINLPKALTEKEQQELVDLVDVKLGQEYELVVTTYAGLCRYRVGDLLRVTGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVTHLVPFDASLSEYTSYADTSSIPGHYVLFWELCLDGNTPIPPS-VFEDCCLA 522
BLAST of FC875343 vs. ExPASy Swiss-Prot
Match: GH34_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.4 OS=Oryza sativa subsp. japonica GN=GH3.4 PE=2 SV=1) HSP 1 Score: 268.855 bits (686), Expect = 1.632e-71 Identity = 135/220 (61.36%), Postives = 165/220 (75.00%), Query Frame = 3 Query: 3 IWPNTKYLDVIVTGAMAQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEPAHSFGLTSSDPQP-----VDLVDVEVGKEYQLVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIESDKTDEAKLQNAIDNASRLLREFNTNVGEYTICANT-KTIPGHYVIYWELLIKDSANSPNNEVLNQCCLA 644 +WP+TKY+DVIVTGAMAQYIPTL++Y GG LP+ACTMYASSECYFGLNLNP+C+PSEV+YT++P M YFEFLP +S + P+P VDLVDV++G EY+LV+TTY+GLYRYRVGD+LRV GF N+AP F FVRRKNV LSI+SDKTDEA+L A+ A + L F ++ EYT A+T TIPGHYV++WEL V CCLA Sbjct: 307 VWPSTKYIDVIVTGAMAQYIPTLEFYGGG-LPLACTMYASSECYFGLNLNPMCKPSEVAYTLIPTMCYFEFLP---VNSGANDVAAPEPDHRGLVDLVDVKLGHEYELVVTTYSGLYRYRVGDVLRVAGFKNAAPMFAFVRRKNVALSIDSDKTDEAELHAAVTEAVQHLAPFGASLVEYTSYADTATTIPGHYVLFWELRSPAGGTPVPASVFEDCCLA 522 The following BLAST results are available for this feature:
BLAST of FC875343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875343 ID=FC875343; Name=FC875343; organism=Citrus clementina; type=EST; length=644bpback to top |