FC875345

Overview
NameFC875345
Unique NameFC875345
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC875345_ssr41 microsatellite FC875345_ssr41:41..56. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig12758 contig Ccv1_Contig12758:108..822. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875345 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica GN=SAP8 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.611e-43
Identity = 85/138 (61.59%), Postives = 98/138 (71.01%), Query Frame = 1
Query:  310 HDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAAXXXXXXXXXXXXXXXKEPIIAGSVDLQVGPVEIKKFSMEPS--SGSSFGF-AGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRY 714
            H ETGCQ PEGPILC+NNCGFFGSAATMNMCSKCHK MI+ QEQA+LAA               KEPIIAG  ++ V  VE+K    +P+  +G S G     K +EGP RC+TC KRVGLTGFNCRCGNL+CA+HRY
Sbjct:    3 HKETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAA--SSIDSIVNGGDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRY 138          
BLAST of FC875345 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica GN=SAP8 PE=2 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 8.611e-43
Identity = 85/138 (61.59%), Postives = 98/138 (71.01%), Query Frame = 1
Query:  310 HDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAAXXXXXXXXXXXXXXXKEPIIAGSVDLQVGPVEIKKFSMEPS--SGSSFGF-AGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRY 714
            H ETGCQ PEGPILC+NNCGFFGSAATMNMCSKCHK MI+ QEQA+LAA               KEPIIAG  ++ V  VE+K    +P+  +G S G     K +EGP RC+TC KRVGLTGFNCRCGNL+CA+HRY
Sbjct:    3 HKETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAA--SSIDSIVNGGDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRY 138          
BLAST of FC875345 vs. ExPASy Swiss-Prot
Match: SAP4_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica GN=SAP4 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.386e-39
Identity = 83/140 (59.29%), Postives = 97/140 (69.29%), Query Frame = 1
Query:  310 HDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAAXXXXXXXXXXXXXXXKEPIIA--GSVDLQVGPVEIKKFSMEPS--SGSSFGFAGV-KAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRY 714
            H E GCQ PEGPILC+NNCGFFGSAATMNMCSKCHK MI+ +EQA+LAA               KE I+A  GS  + V  VE K   ++P+  +G+S   A V K KEGP RC TC KRVGLTGFNCRCGN++CA+HRY
Sbjct:    3 HKEAGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAA--SSIDSIVNGCDGGKEHIVAASGSTAVAVAQVEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKRVGLTGFNCRCGNMYCALHRY 140          
BLAST of FC875345 vs. ExPASy Swiss-Prot
Match: SAP2_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana GN=SAP2 PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 9.543e-34
Identity = 78/142 (54.93%), Postives = 86/142 (60.56%), Query Frame = 1
Query:  310 HDETGCQAP-EGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAAXXXXXXXXXXXXXXXKEPIIAGSVDLQVGPVEIKKFSMEPSSGSSFGFAGVKAKE------GPKRCTTCNKRVGLTGFNCRCGNLFCAVHRY 714
            HD+TGCQ+P EGP LC NNCGFFGSAATMNMCSKCHK M+  QEQ   A                KE   A  VD++   VE    S++PSS      A V A E      GP RCTTCNKRVGLTGF CRCG+LFC  HRY
Sbjct:    3 HDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQG--AKFASAVSGTSSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQV--VAEVVAPEEAAKPKGPSRCTTCNKRVGLTGFKCRCGSLFCGTHRY 140          
BLAST of FC875345 vs. ExPASy Swiss-Prot
Match: SAP6_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana GN=SAP6 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.429e-21
Identity = 55/136 (40.44%), Postives = 69/136 (50.74%), Query Frame = 1
Query:  313 DETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAAXXXXXXXXXXXXXXXKEPIIAGSV--DLQVGPVEIKKFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRY 714
            +E  CQ PE   LCVNNCGF GS+ATMN+CS C+  + L Q+Q   +                    I+  +   L   P  +K    E  +  S        ++ P RCTTC KRVGLTGF CRCG +FC VHRY
Sbjct:    3 EEHRCQTPESNRLCVNNCGFLGSSATMNLCSNCYGDLCLKQQQQSSSIKSTVESSLSVSPPSSSSSEISSPIIPPLLKNP-SVKLEVPEKKAVISLPTTEQNQQQRPNRCTTCRKRVGLTGFKCRCGTMFCGVHRY 137          
BLAST of FC875345 vs. ExPASy Swiss-Prot
Match: SAP4_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana GN=SAP4 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.264e-21
Identity = 54/135 (40.00%), Postives = 66/135 (48.89%), Query Frame = 1
Query:  313 DETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAAXXXXXXXXXXXXXXXKEPIIAGSVDLQVGPVEIKKFSM-EPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRY 714
            +E  C+ PEG  LCVNNCGFFGS+ATMN+CS C+  + L Q+Q                      P+IA  ++     +EI      E               + P RCT C KRVGLTGF CRCG  FC  HRY
Sbjct:    3 EEHRCETPEGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASMKSTVESSL---------SPVIAPVLENYAAELEIPTTKKTEEKKPIQIPTEQPSPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRY 128          
BLAST of FC875345 vs. ExPASy Swiss-Prot
Match: SAP6_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica GN=SAP6 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.598e-20
Identity = 53/134 (39.55%), Postives = 66/134 (49.25%), Query Frame = 1
Query:  313 DETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAAXXXXXXXXXXXXXXXKEPIIAGSVDLQVGPVEIKKFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRY 714
            +ETG   PE PILCVNNCGFFGS  T NMCSKC++  +  +  A +                   P++    D   G V   K  ME  +           K    RC +C K+VGLTGF CRCG  FC++HRY
Sbjct:   11 EETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDTVKAKTVATVV-------EKKPLASLSSTPLVTEVTDGGSGSVADGKQVMEEDT----------PKPPSNRCLSCRKKVGLTGFKCRCGGTFCSMHRY 127          
BLAST of FC875345 vs. ExPASy Swiss-Prot
Match: SAP9_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica GN=SAP9 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.024e-19
Identity = 56/148 (37.84%), Postives = 73/148 (49.32%), Query Frame = 1
Query:  295 EKMESHDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAAXXXXXXXXXXXXXXXKEPIIAGSVDLQVGPVEIKKFSMEPSSGSSFGFAGVK----AKEGPK----RCTTCNKRVGLTGFNCRCGNLFCAVHRY 714
            E  ++  E     PE PILCVNNCGFFGS+ T NMCSKC++  +   +   +AA                 P++         P    K  +EP+       A V+    A+E PK    RC +C K+VGLTGF CRCG  FC+ HRY
Sbjct:    4 ESWKNESEETVHTPEAPILCVNNCGFFGSSMTNNMCSKCYRDFV---KVTTMAA-----------------PVVEKKA---FTPASSSKTPLEPAKPDEVPAAAVEDKQAAQEPPKPPSNRCLSCRKKVGLTGFQCRCGGTFCSTHRY 128          
BLAST of FC875345 vs. ExPASy Swiss-Prot
Match: SAP7_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Oryza sativa subsp. japonica GN=SAP7 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.635e-17
Identity = 46/134 (34.33%), Postives = 64/134 (47.76%), Query Frame = 1
Query:  313 DETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAAXXXXXXXXXXXXXXXKEPIIAGSVDLQVGPVEIKKFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRY 714
            DET C +  G  +CV  CGFFGS AT NMCS+C++    + +  + AA                   +A +   +     +   ++  SS ++      KA   P RC  C K+VGLTGF CRCG  FC  HR+
Sbjct:   11 DETACGSGAGAAMCVTGCGFFGSEATNNMCSRCYREHSADNDAVEEAAAANSDLELVG---------VAETTTKKARMSAVVPVAVASSSSAAAEQPAAKAATAPNRCAACRKKVGLTGFKCRCGGNFCGGHRH 135          
BLAST of FC875345 vs. ExPASy Swiss-Prot
Match: SAP1_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Arabidopsis thaliana GN=SAP1 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.060e-16
Identity = 48/137 (35.04%), Postives = 64/137 (46.72%), Query Frame = 1
Query:  304 ESHDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAAXXXXXXXXXXXXXXXKEPIIAGSVDLQVGPVEIKKFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRY 714
            E +D T   +P  P LCV  CGFFGS + MN+CSKC++ +   +EQ   A                 +     S ++  G +     S     G S        K    RC +CNK+VG+TGF CRCG+ FC  HRY
Sbjct:    4 EQNDSTSF-SPSEPKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSLNPNKPKTQPQQ----SQEITQGVLGSGSSSSSTRGGDSAAAPLDPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRY 135          
The following BLAST results are available for this feature:
BLAST of FC875345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
SAP8_ORYSJ8.611e-4361.59Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ORYSI8.611e-4361.59Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP4_ORYSJ3.386e-3959.29Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP2_ARATH9.543e-3454.93Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ARATH1.429e-2140.44Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP4_ARATH9.264e-2140.00Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ORYSJ4.598e-2039.55Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP9_ORYSJ1.024e-1937.84Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP7_ORYSJ1.635e-1734.33Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ARATH1.060e-1635.04Zinc finger A20 and AN1 domain-containing stress-a... [more]

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Properties
Property NameValue
Genbank descriptionC31402H07EF CTVClemen1 Citrus clementina cDNA clone C31402H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875345 ID=FC875345; Name=FC875345; organism=Citrus clementina; type=EST; length=716bp
AGAGAACTTGGAAGAAATTTTAAAAAAATAAAACGCCCCGTCTCTCTCTC
TCTCTCTGTCTCTTTTCTTTTTTATTTTTGCTTGGCCTCACTTTTTTTTT
TCTTTTTCAATATTATTACCTACGATTATCTCTTCGATTGAAGGCAAGCT
TTCACGTCCATAAAACGACGTCGATTAGTTTCAGTCTTGTCGGTTGATCA
AAACCTTGATTTTTGAAACTGATTTTTGGGGAATTTTTTTTTACAGATTA
ATTCGGTTCGATTTTGTAAATCAAGATCGGACGAATAGGAGGTAGAAAAG
ATGGAATCACATGATGAAACTGGATGCCAAGCTCCAGAAGGCCCCATTCT
TTGCGTCAACAATTGTGGCTTCTTCGGAAGTGCTGCTACCATGAATATGT
GTTCCAAGTGCCACAAGGCCATGATCCTTAATCAGGAACAGGCCCAACTA
GCAGCTTCATCTATTGGGAGCATTGTGCATGGCAGCTCCGGTGGGACTGG
CAAGGAGCCCATCATTGCTGGCAGCGTGGATCTACAAGTGGGACCAGTTG
AGATAAAGAAATTCTCCATGGAACCATCTAGTGGTTCTTCCTTTGGCTTC
GCAGGAGTGAAAGCAAAGGAAGGCCCTAAAAGGTGTACAACTTGCAATAA
ACGTGTCGGTTTGACAGGGTTCAATTGCAGATGTGGGAACCTCTTCTGTG
CAGTTCACCGATACTC
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