FC875359

Overview
NameFC875359
Unique NameFC875359
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length742
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875359 vs. ExPASy Swiss-Prot
Match: DI194_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabidopsis thaliana GN=DI19-4 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.110e-31
Identity = 66/140 (47.14%), Postives = 88/140 (62.86%), Query Frame = 1
Query:  235 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLLARXXXXXXXXXXXXDPWL-SFIYNMPTADESESIQPALSTGEGAEDKARVR 651
            E+ CPFC+EDFD+VGLCCHIDEEHPVEAK+GVCPVC  RV +D+V HITTQH N      + +L +G  +ST  +L+KEL+ A+ QSLL              DP L SF++N P+ ++S +      T   A  K  ++
Sbjct:   46 EFICPFCAEDFDIVGLCCHIDEEHPVEAKNGVCPVCTKRVGLDIVGHITTQHANFFKVQRRRRLRRGGYSSTYLALKKELREANLQSLLGGSSSFTSSTNIDSDPLLSSFMFNSPSVNQSANKSATPVTVGNAATKVSIK 185          
BLAST of FC875359 vs. ExPASy Swiss-Prot
Match: DI197_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 7 OS=Arabidopsis thaliana GN=DI19-7 PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.212e-26
Identity = 64/153 (41.83%), Postives = 94/153 (61.44%), Query Frame = 1
Query:  235 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLLARXXXXXXXXXXXXDPWL-SFIYNMPTA---DESESIQPALSTGEGAEDKARVRNI*NNAQQSS 681
            E+ CPFC+++FD+VGLCCHID  HPVEAK+GVCPVC  +V +D+V HITTQHGN+     + +L KG  +ST  +L+KEL+ A+ QS L              DP L SF++  P+A    E +S+   +S  + ++ K +  +  N  Q+ +
Sbjct:   42 EFMCPFCADEFDIVGLCCHIDVNHPVEAKNGVCPVCTKKVGLDIVGHITTQHGNVFKVQRRRRLRKGGYSSTYLTLKKELREANLQS-LGGSSTFIPSSNIDSDPLLSSFMFKPPSAIPITEGDSV-AQVSPKDTSKSKIQQESFSNEDQEKA 192          
BLAST of FC875359 vs. ExPASy Swiss-Prot
Match: DI195_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 5 OS=Arabidopsis thaliana GN=DI19-5 PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 3.526e-26
Identity = 61/140 (43.57%), Postives = 84/140 (60.00%), Query Frame = 1
Query:  235 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLLARXXXXXXXXXXXXDPWLSFIYNMPTADESESIQPALSTGEGAEDKARVRN 654
            +YPCPFCS+D+DLV LC HIDEEH ++A +G+CPVC  RV M MVDHITTQH ++       +L+K  S S  S   ++    + QSL+              DP LSFIYN P+  +S+ +QP  S+    ED + +R+
Sbjct:   42 DYPCPFCSDDYDLVELCHHIDEEHQLDANNGICPVCSRRVKMHMVDHITTQHRDVFK-----RLYKDESYSAFSPGTRK----YLQSLIDEPLSTNHTSKSVLDPLLSFIYNPPSPKKSKLVQPDSSSEASMEDNSLIRD 172          
BLAST of FC875359 vs. ExPASy Swiss-Prot
Match: DI193_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabidopsis thaliana GN=DI19-3 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.605e-26
Identity = 53/88 (60.23%), Postives = 65/88 (73.86%), Query Frame = 1
Query:  235 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSL 498
            E+ CPFCS+ FD+V LCCHIDE+HP+EAK+GVCPVC  RV +DMV HIT QH NI     K K  +G S ST+S LR+E  + +FQSL
Sbjct:   43 EFACPFCSDYFDIVSLCCHIDEDHPMEAKNGVCPVCAVRVGVDMVAHITLQHANIFKMHRKRKPRRGGSYSTLSILRREFPDGNFQSL 130          
BLAST of FC875359 vs. ExPASy Swiss-Prot
Match: DI192_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza sativa subsp. japonica GN=DI19-2 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.340e-25
Identity = 65/172 (37.79%), Postives = 90/172 (52.33%), Query Frame = 1
Query:  226 GEYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHK--GNSNSTISSLRKELQNAHFQSLLARXXXXXXXXXXXXDPWL-SFIYNMPTADESESIQ-------------PALSTGEGAEDKARVRNI*NNAQQSSCQRG 693
            G   Y CPFC EDFD V  CCH+D+EH VEAKSGVCP+C TRV +D++ H+T QHG+      + ++ K    S+S +S LRK+L++   QS L              DP+L S I ++P A+ S+ +              P   T E AE     ++    AQ+S   RG
Sbjct:   50 GGEAYNCPFCGEDFDFVAFCCHVDDEHAVEAKSGVCPICATRVGVDLIGHLTMQHGSYFKMQRRRRVRKISSGSHSLLSLLRKDLRDGSLQSFLGGSSYVSNPPAAAPDPFLSSLICSLPVAEPSKDLHSDSSDNNFLLNKFPDDKTAERAEPSLSEKDQKERAQRSKFVRG 221          
BLAST of FC875359 vs. ExPASy Swiss-Prot
Match: DI196_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Arabidopsis thaliana GN=DI19-6 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.134e-24
Identity = 64/172 (37.21%), Postives = 93/172 (54.07%), Query Frame = 1
Query:  235 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLL--ARXXXXXXXXXXXXDPWLSFIYNMPTADESESIQPALSTGEGAEDKARVRNI--*NNAQQSSCQRGHLE--KQQEHLHGTI 732
            EY CPFCS+ FD+V LCCHIDE+HP++AK+GVCP+C  +V+ DM+ HIT QH N+     K K  +G + S +S L++E  + +FQSL                 DP LS   + P AD+    + +L     +  K   +++   N  +QS     H E  KQ E + G +
Sbjct:   43 EYACPFCSDYFDIVSLCCHIDEDHPMDAKNGVCPICAVKVSSDMIAHITLQHANMFKVTRKRKSRRGGAQSMLSILKREFPDGNFQSLFEGTSRAVSSSSASIAADPLLSSFIS-PMADDFFISESSLCADTSSAKKTLNQSLPERNVEKQSLSAEDHREKLKQSEFVQGIL 213          
BLAST of FC875359 vs. ExPASy Swiss-Prot
Match: DI191_ARATH (Protein DEHYDRATION-INDUCED 19 OS=Arabidopsis thaliana GN=DI19-1 PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 6.224e-23
Identity = 46/89 (51.69%), Postives = 63/89 (70.79%), Query Frame = 1
Query:  235 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLL 501
            E+ CPFC+E +D++GLCCHID+EH +E+K+ VCPVC  +V +D+V HIT  HG++     K K  K  +NST+S LRKEL+    Q LL
Sbjct:   34 EFACPFCAESYDIIGLCCHIDDEHTLESKNAVCPVCSLKVGVDIVAHITLHHGSLFKLQRKRKSRKSGTNSTLSLLRKELREGDLQRLL 122          
BLAST of FC875359 vs. ExPASy Swiss-Prot
Match: DI191_ORYSJ (Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa subsp. japonica GN=DI19-1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.099e-19
Identity = 49/137 (35.77%), Postives = 75/137 (54.74%), Query Frame = 1
Query:  235 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLLA----RXXXXXXXXXXXXDPWL-SFIYNMPTADESESIQPALSTGEGA 630
            E+ CP+C ED D+V LC H++EEHP E  +  CP+C  ++  DM++HIT QHG +  +  +L+      +  +S L ++L+ AH Q LL     R            DP L SF  + PT+D  E+ +P +S  + A
Sbjct:   41 EFACPYCYEDHDVVSLCAHLEEEHPFEPHAAPCPICSDKIAKDMLNHITVQHGYLFKNRRRLRRFVIPGSQALSLLSRDLREAHLQVLLGGGGHRSNNSSNTTNISADPLLSSFGLSFPTSDTEETSKPPISIPDDA 177          
BLAST of FC875359 vs. ExPASy Swiss-Prot
Match: DI192_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Arabidopsis thaliana GN=DI19-2 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.215e-18
Identity = 58/178 (32.58%), Postives = 85/178 (47.75%), Query Frame = 1
Query:  121 STSSSRNYQSTLKSQFAXXXXXXXXXXXXXXXXVKGEYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLLARXXXXXXXXXXXXDPWLSFIYNMPTADESESIQPALSTGEGAEDKARVRN 654
            S+ SSR+Y+S   +++                 +    EYPCPFC+ D+DLV LC HIDEEH  EA +G+CPVC  RV M MVDHIT+ H ++  S  K   ++ +       L  +    H   L               D +LSFI N    ++++ + P  S     EDK  +++
Sbjct:   10 SSGSSRSYRSETAAKYQSGPYQDLEEFEEVDDDIA--VEYPCPFCASDYDLVELCHHIDEEHRHEANNGICPVCSKRVKMHMVDHITSHHRDVLKSEQKEMSYRED-----PYLSDKYLQPHLDELPPSMNHHQHPSKHVSDQFLSFINNSALPNQTKLVLPDSS----VEDKNPIKD 176          
BLAST of FC875359 vs. ExPASy Swiss-Prot
Match: DI193_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Oryza sativa subsp. japonica GN=DI19-3 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.369e-16
Identity = 33/86 (38.37%), Postives = 55/86 (63.95%), Query Frame = 1
Query:  244 CPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLL 501
            CP+C ED D+  LC H++E+HP E  +  CP+C  ++T DM++HIT QHG +  S  +++      +  +S L ++L++A  Q+LL
Sbjct:   64 CPYCYEDHDIASLCAHLEEDHPYEPHTSPCPICFEKITRDMLNHITMQHGYLFKSGRRMRRFDIPESQALSLLSRDLRDAQLQALL 149          
The following BLAST results are available for this feature:
BLAST of FC875359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
DI194_ARATH8.110e-3147.14Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabid... [more]
DI197_ARATH1.212e-2641.83Protein DEHYDRATION-INDUCED 19 homolog 7 OS=Arabid... [more]
DI195_ARATH3.526e-2643.57Protein DEHYDRATION-INDUCED 19 homolog 5 OS=Arabid... [more]
DI193_ARATH4.605e-2660.23Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabid... [more]
DI192_ORYSJ1.340e-2537.79Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza ... [more]
DI196_ARATH1.134e-2437.21Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Arabid... [more]
DI191_ARATH6.224e-2351.69Protein DEHYDRATION-INDUCED 19 OS=Arabidopsis thal... [more]
DI191_ORYSJ1.099e-1935.77Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa sub... [more]
DI192_ARATH1.215e-1832.58Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Arabid... [more]
DI193_ORYSJ7.369e-1638.37Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Oryza ... [more]

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Properties
Property NameValue
Genbank descriptionC31403A10EF CTVClemen1 Citrus clementina cDNA clone C31403A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875359 ID=FC875359; Name=FC875359; organism=Citrus clementina; type=EST; length=742bp
GGAGCGCTTAAATCAAAGGGGAAGTTTACTCGCTATTTTATGCTATCATC
TGAATTGGGTTTTGTTTGTGAATTTTAATTAACAGAAGATTCAATGGATT
ACAGTAGATACTTTGGTCTTTCTACTTCATCATCAAGGAACTATCAGTCA
ACTCTCAAGTCTCAGTTTGCGGATTTTTGCATTGATTTTGAGGATATAGA
AGAAGATGATTATGAGGAAGTGAAAGGAGAGTATGAGTATCCATGCCCAT
TTTGTTCGGAGGATTTTGATTTAGTTGGATTATGCTGTCATATTGATGAG
GAACATCCTGTTGAAGCAAAGTCGGGGGTATGCCCTGTTTGCGTTACAAG
GGTAACGATGGACATGGTTGATCACATAACAACACAACATGGAAACATTT
CAAATAGTTGGCACAAATTAAAACTTCATAAAGGCAACTCTAATTCAACT
ATATCATCTTTGAGGAAAGAGTTGCAAAATGCACATTTTCAATCTCTTCT
TGCAAGGTCATCCTCTTCTGTTTCTTCCTCCAAAAAGACATCTGATCCAT
GGCTATCATTTATTTACAACATGCCTACTGCTGACGAGTCTGAAAGCATA
CAGCCTGCTTTGAGCACTGGAGAAGGAGCAGAAGATAAAGCTCGTGTGAG
AAACATTTGAAACAATGCTCAGCAATCTTCTTGTCAACGAGGACATTTGG
AGAAGCAACAGGAGCATTTGCACGGGACTATATTTCTACATC
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