FC875367

Overview
NameFC875367
Unique NameFC875367
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length670
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9375 contig Ccv1_Contig9375:21..690. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875367 vs. ExPASy Swiss-Prot
Match: BZW2_CHICK (Basic leucine zipper and W2 domain-containing protein 2 OS=Gallus gallus GN=BZW2 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.648e-21
Identity = 60/189 (31.75%), Postives = 98/189 (51.85%), Query Frame = 3
Query:  105 MSSKEKPTLGGTRIKPRKRNIAAPLDPAAFSDAVVQIYLDNAGDLELIAKCIES--SDLNFSRYGDTFFEVVFTGGRTQPGTTKPDEGERHS---YSIIDCEPQREAILPSVIYIQKILRRRPFLIKNLENVTRRFMQSLELFEENERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVGKGLVLSF 656
            M+  +KP L G R K RKR+     +P  F D +VQ   +   DLE IAK ++S  S L++ RY DT F+++  G    PG T+ D+ ++     + +   E   +AI        K++RR  +L K  E+  ++ +  L+ F E E+ KLA+ + +  +   +G  P T+   L  DN+V +G+  SF
Sbjct:    1 MNKNQKPVLTGQRFKTRKRDEKEKFEPTVFRDTIVQGLNEAGSDLEAIAKFLDSAGSRLDYRRYADTLFDILVAGSMLAPGGTRIDDNDKTKMTRHCVFFAEEDHDAIRNYAQVFNKLIRRYKYLEKAFEDEIKKLLLFLKAFSETEQTKLAMLSGILLA---NGTLPATILTSLFTDNIVKEGIAASF 186          
BLAST of FC875367 vs. ExPASy Swiss-Prot
Match: BZW2_MACFA (Basic leucine zipper and W2 domain-containing protein 2 OS=Macaca fascicularis GN=BZW2 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.262e-21
Identity = 59/189 (31.22%), Postives = 97/189 (51.32%), Query Frame = 3
Query:  105 MSSKEKPTLGGTRIKPRKRNIAAPLDPAAFSDAVVQIYLDNAGDLELIAKCIES--SDLNFSRYGDTFFEVVFTGGRTQPGTTKPDEGER---HSYSIIDCEPQREAILPSVIYIQKILRRRPFLIKNLENVTRRFMQSLELFEENERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVGKGLVLSF 656
            M+  +KP L G R K RKR+     +P  F D +VQ   +   DLE +AK ++S  S L++ RY DT F+++  G    PG T+ D+G++    ++ +       E I        K++RR  +L K  E+  ++ +  L+ F E E+ KLA+ + +      +G  P T+   L  D+LV +G+  SF
Sbjct:    1 MNKHQKPVLTGQRFKTRKRDEKEKFEPTVFRDTLVQGLNEAGDDLEAVAKFLDSTGSRLDYRRYADTLFDILVAGSMLAPGGTRIDDGDKTKMTNHCVFSANEDHETIRNYAQVFNKLIRRYKYLEKAFEDEMKKLLLFLKAFSETEQTKLAMLSGILLG---NGTLPATILTSLFTDSLVKEGIAASF 186          
BLAST of FC875367 vs. ExPASy Swiss-Prot
Match: BZW2_HUMAN (Basic leucine zipper and W2 domain-containing protein 2 OS=Homo sapiens GN=BZW2 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.262e-21
Identity = 59/189 (31.22%), Postives = 97/189 (51.32%), Query Frame = 3
Query:  105 MSSKEKPTLGGTRIKPRKRNIAAPLDPAAFSDAVVQIYLDNAGDLELIAKCIES--SDLNFSRYGDTFFEVVFTGGRTQPGTTKPDEGER---HSYSIIDCEPQREAILPSVIYIQKILRRRPFLIKNLENVTRRFMQSLELFEENERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVGKGLVLSF 656
            M+  +KP L G R K RKR+     +P  F D +VQ   +   DLE +AK ++S  S L++ RY DT F+++  G    PG T+ D+G++    ++ +       E I        K++RR  +L K  E+  ++ +  L+ F E E+ KLA+ + +      +G  P T+   L  D+LV +G+  SF
Sbjct:    1 MNKHQKPVLTGQRFKTRKRDEKEKFEPTVFRDTLVQGLNEAGDDLEAVAKFLDSTGSRLDYRRYADTLFDILVAGSMLAPGGTRIDDGDKTKMTNHCVFSANEDHETIRNYAQVFNKLIRRYKYLEKAFEDEMKKLLLFLKAFSETEQTKLAMLSGILLG---NGTLPATILTSLFTDSLVKEGIAASF 186          
BLAST of FC875367 vs. ExPASy Swiss-Prot
Match: BZW1_XENTR (Basic leucine zipper and W2 domain-containing protein 1 OS=Xenopus tropicalis GN=bzw1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.262e-21
Identity = 57/183 (31.15%), Postives = 94/183 (51.37%), Query Frame = 3
Query:  114 KEKPTLGGTRIKPRKRNIAAPLDPAAFSDAVVQIYLDNAGDLELIAKCIESSD--LNFSRYGDTFFEVVFTGGRTQPGTTKPDEGERHSYSIIDCEPQREAILPSVIYIQKILRRRPFLIKNLENVTRRFMQSLELFEENERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVGKGLVLSF 656
            ++KPTL G R K RKR+     DP  F D ++Q   +   DLE +AK +++S   L++ RY +T F+++  GG   PG T  DE  R    +   +   E +        K++RR  +L K  E   ++ +  L+ F E+ER KLA+ T +  +   +G    ++   L  +NLV +G+  +F
Sbjct:    6 QQKPTLSGQRFKTRKRDEKERFDPTQFQDCIIQGLNETGNDLEAVAKFLDASGAKLDYRRYAETLFDILVAGGMLAPGGTLADEVIRTDVCVFSAQEDLETMQAFAQVFNKLIRRYKYLEKGFEEEVKKLLLFLKGFSESERNKLAMLTGILLA---NGNLSASILNSLYNENLVKEGVSAAF 185          
BLAST of FC875367 vs. ExPASy Swiss-Prot
Match: BZW1_XENLA (Basic leucine zipper and W2 domain-containing protein 1 OS=Xenopus laevis GN=bzw1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.262e-21
Identity = 57/183 (31.15%), Postives = 94/183 (51.37%), Query Frame = 3
Query:  114 KEKPTLGGTRIKPRKRNIAAPLDPAAFSDAVVQIYLDNAGDLELIAKCIESSD--LNFSRYGDTFFEVVFTGGRTQPGTTKPDEGERHSYSIIDCEPQREAILPSVIYIQKILRRRPFLIKNLENVTRRFMQSLELFEENERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVGKGLVLSF 656
            ++KPTL G R K RKR+     DP  F D ++Q   +   DLE +AK +++S   L++ RY +T F+++  GG   PG T  DE  R    +   +   E +        K++RR  +L K  E   ++ +  L+ F E+ER KLA+ T +  +   +G    ++   L  +NLV +G+  +F
Sbjct:    6 QQKPTLSGQRFKTRKRDEKERFDPTQFQDCIIQGLNETGNDLEAVAKFLDASGAKLDYRRYAETLFDILVAGGMLAPGGTLADEVIRTDVCVFSAQEDLETMQAFAQVFNKLIRRYKYLEKGFEEEVKKLLLFLKGFSESERNKLAMLTGILLA---NGNLSASILNSLYNENLVKEGVSAAF 185          
BLAST of FC875367 vs. ExPASy Swiss-Prot
Match: BZW1_CHICK (Basic leucine zipper and W2 domain-containing protein 1 OS=Gallus gallus GN=BZW1 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.178e-21
Identity = 56/183 (30.60%), Postives = 95/183 (51.91%), Query Frame = 3
Query:  114 KEKPTLGGTRIKPRKRNIAAPLDPAAFSDAVVQIYLDNAGDLELIAKCIESSD--LNFSRYGDTFFEVVFTGGRTQPGTTKPDEGERHSYSIIDCEPQREAILPSVIYIQKILRRRPFLIKNLENVTRRFMQSLELFEENERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVGKGLVLSF 656
            ++KPTL G R K RKR+     DP  F D ++Q   +   DLE +AK +++S   L++ RY +T F+++  GG   PG T  D+  R    +   +   E +        K++RR  +L K  E+  ++ +  L+ F E+ER KLA+ T +  +   +G    ++   L  +NLV +G+  +F
Sbjct:    5 QQKPTLSGQRFKTRKRDEKERFDPTQFQDCIIQGLTETGTDLEAVAKFLDASGAKLDYRRYAETLFDILVAGGMLAPGGTLADDMTRTDVCVFAAQEDLETMQAFAQVFNKLIRRYKYLEKGFEDEVKKLLLFLKGFSESERNKLAMLTGILLA---NGTLNASILNSLYNENLVKEGVSAAF 184          
BLAST of FC875367 vs. ExPASy Swiss-Prot
Match: BZW2_RAT (Basic leucine zipper and W2 domain-containing protein 2 OS=Rattus norvegicus GN=Bzw2 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.068e-20
Identity = 59/189 (31.22%), Postives = 97/189 (51.32%), Query Frame = 3
Query:  105 MSSKEKPTLGGTRIKPRKRNIAAPLDPAAFSDAVVQIYLDNAGDLELIAKCIES--SDLNFSRYGDTFFEVVFTGGRTQPGTTKPDEGER---HSYSIIDCEPQREAILPSVIYIQKILRRRPFLIKNLENVTRRFMQSLELFEENERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVGKGLVLSF 656
            M+  +KP L G R K RKR+     +P  F D +VQ   +   DLE +AK ++S  S L++ RY DT F+++  G    PG T+ D+G++    ++ +       E I        K++RR  +L K  E+  ++ +  L+ F E E+ KLA+ + +      +G  P T+   L  D+LV +G+  SF
Sbjct:    1 MNKHQKPVLTGQRFKTRKRDEKEKFEPTVFRDTLVQGLNEAGDDLEAVAKFLDSTGSRLDYRRYADTLFDILVAGSMLAPGGTRIDDGDKTKMTNHCVFSANEDHETIRNYAQVFNKLIRRYKYLEKAFEDEMKKLLLFLKAFSEAEQTKLAMLSGILLG---NGTLPATILTSLFTDSLVKEGIAASF 186          
BLAST of FC875367 vs. ExPASy Swiss-Prot
Match: BZW2_MUSMM (Basic leucine zipper and W2 domain-containing protein 2 OS=Mus musculus molossinus GN=Bzw2 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.068e-20
Identity = 59/189 (31.22%), Postives = 97/189 (51.32%), Query Frame = 3
Query:  105 MSSKEKPTLGGTRIKPRKRNIAAPLDPAAFSDAVVQIYLDNAGDLELIAKCIES--SDLNFSRYGDTFFEVVFTGGRTQPGTTKPDEGER---HSYSIIDCEPQREAILPSVIYIQKILRRRPFLIKNLENVTRRFMQSLELFEENERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVGKGLVLSF 656
            M+  +KP L G R K RKR+     +P  F D +VQ   +   DLE +AK ++S  S L++ RY DT F+++  G    PG T+ D+G++    ++ +       E I        K++RR  +L K  E+  ++ +  L+ F E E+ KLA+ + +      +G  P T+   L  D+LV +G+  SF
Sbjct:    1 MNKHQKPVLTGQRFKTRKRDEKEKFEPTVFRDTLVQGLNEAGDDLEAVAKFLDSTGSRLDYRRYADTLFDILVAGSMLAPGGTRIDDGDKTKMTNHCVFSANEDHETIRNYAQVFNKLIRRYKYLEKAFEDEMKKLLLFLKAFSEAEQTKLAMLSGILLG---NGTLPATILTSLFTDSLVKEGIAASF 186          
BLAST of FC875367 vs. ExPASy Swiss-Prot
Match: BZW2_MOUSE (Basic leucine zipper and W2 domain-containing protein 2 OS=Mus musculus GN=Bzw2 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.068e-20
Identity = 59/189 (31.22%), Postives = 97/189 (51.32%), Query Frame = 3
Query:  105 MSSKEKPTLGGTRIKPRKRNIAAPLDPAAFSDAVVQIYLDNAGDLELIAKCIES--SDLNFSRYGDTFFEVVFTGGRTQPGTTKPDEGER---HSYSIIDCEPQREAILPSVIYIQKILRRRPFLIKNLENVTRRFMQSLELFEENERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVGKGLVLSF 656
            M+  +KP L G R K RKR+     +P  F D +VQ   +   DLE +AK ++S  S L++ RY DT F+++  G    PG T+ D+G++    ++ +       E I        K++RR  +L K  E+  ++ +  L+ F E E+ KLA+ + +      +G  P T+   L  D+LV +G+  SF
Sbjct:    1 MNKHQKPVLTGQRFKTRKRDEKEKFEPTVFRDTLVQGLNEAGDDLEAVAKFLDSTGSRLDYRRYADTLFDILVAGSMLAPGGTRIDDGDKTKMTNHCVFSANEDHETIRNYAQVFNKLIRRYKYLEKAFEDEMKKLLLFLKAFSEAEQTKLAMLSGILLG---NGTLPATILTSLFTDSLVKEGIAASF 186          
BLAST of FC875367 vs. ExPASy Swiss-Prot
Match: BZW1_RAT (Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus GN=Bzw1 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.395e-20
Identity = 56/183 (30.60%), Postives = 95/183 (51.91%), Query Frame = 3
Query:  114 KEKPTLGGTRIKPRKRNIAAPLDPAAFSDAVVQIYLDNAGDLELIAKCIESSD--LNFSRYGDTFFEVVFTGGRTQPGTTKPDEGERHSYSIIDCEPQREAILPSVIYIQKILRRRPFLIKNLENVTRRFMQSLELFEENERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVGKGLVLSF 656
            ++KPTL G R K RKR+     DP  F D ++Q   +   DLE +AK +++S   L++ RY +T F+++  GG   PG T  D+  R    +   +   E +        K++RR  +L K  E+  ++ +  L+ F E+ER KLA+ T +  +   +G    ++   L  +NLV +G+  +F
Sbjct:    6 QQKPTLSGQRFKTRKRDEKERFDPTQFQDCIIQGLTETGTDLEAVAKFLDASGAKLDYRRYAETLFDILVAGGMLAPGGTLADDMMRTDVCVFAAQEDLETMQAFAQVFNKLIRRYKYLEKGFEDEVKKLLLFLKGFSESERNKLAMLTGVLLA---NGTLNASILNSLYNENLVKEGVSAAF 185          
The following BLAST results are available for this feature:
BLAST of FC875367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
BZW2_CHICK1.648e-2131.75Basic leucine zipper and W2 domain-containing prot... [more]
BZW2_MACFA6.262e-2131.22Basic leucine zipper and W2 domain-containing prot... [more]
BZW2_HUMAN6.262e-2131.22Basic leucine zipper and W2 domain-containing prot... [more]
BZW1_XENTR6.262e-2131.15Basic leucine zipper and W2 domain-containing prot... [more]
BZW1_XENLA6.262e-2131.15Basic leucine zipper and W2 domain-containing prot... [more]
BZW1_CHICK8.178e-2130.60Basic leucine zipper and W2 domain-containing prot... [more]
BZW2_RAT1.068e-2031.22Basic leucine zipper and W2 domain-containing prot... [more]
BZW2_MUSMM1.068e-2031.22Basic leucine zipper and W2 domain-containing prot... [more]
BZW2_MOUSE1.068e-2031.22Basic leucine zipper and W2 domain-containing prot... [more]
BZW1_RAT1.395e-2030.60Basic leucine zipper and W2 domain-containing prot... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31403B08EF CTVClemen1 Citrus clementina cDNA clone C31403B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875367 ID=FC875367; Name=FC875367; organism=Citrus clementina; type=EST; length=670bp
CTTTCTCTCTTTTCTCTCATTCCTTCTTTTTTTCTTAAATTCCCAAAAAG
CCCTCACTTGCACAGAGAGTCTCTCCTCTCTCCGATCCCTCTTCTATTTT
GTTTATGAGCTCGAAGGAGAAACCCACTCTTGGTGGAACGCGGATTAAGC
CCCGCAAACGGAATATTGCAGCGCCGCTGGACCCTGCAGCTTTTTCGGAT
GCAGTGGTCCAGATTTATCTGGATAATGCTGGTGATCTGGAACTTATTGC
CAAGTGCATTGAATCTTCTGACCTTAACTTCTCAAGATACGGTGACACCT
TTTTTGAGGTTGTTTTCACAGGAGGCCGTACACAACCTGGAACAACAAAA
CCTGATGAGGGGGAGCGCCACTCTTACTCCATAATAGACTGTGAGCCTCA
GCGTGAAGCCATTTTACCCTCTGTAATCTATATACAGAAGATCCTGAGGC
GGAGGCCATTTCTCATAAAGAATCTTGAAAATGTTACTCGAAGATTCATG
CAGTCATTGGAGCTTTTTGAGGAGAATGAAAGGAAGAAGCTGGCTATTTT
CACAGCACTTGCATTCTCTCAGAAGCTCTCAGGGCTTCCGCCAGAGACTG
TCTTCCAGCCACTGCTTAAGGATAATCTTGTTGGAAAGGGGCTGGTTCTT
TCATTTATACAGACTTCTTC
back to top