FC875371
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875371 vs. ExPASy Swiss-Prot
Match: RL10_EUPES (60S ribosomal protein L10 OS=Euphorbia esula GN=RPL10 PE=2 SV=1) HSP 1 Score: 335.495 bits (859), Expect = 1.649e-91 Identity = 162/176 (92.05%), Postives = 167/176 (94.89%), Query Frame = 3
Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKNHCQQKVGFHQV 575
MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQG CARVAIGQVLLSVRCKD+NS +AQEALRRAKFKFPGRQK +K GF ++
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDNNSHNAQEALRRAKFKFPGRQKIIVSRKWGFTKI 176 HSP 2 Score: 83.5741 bits (205), Expect = 1.129e-15 Identity = 38/48 (79.17%), Postives = 44/48 (91.67%), Query Frame = 1
Query: 535 KKIIVSRKWGFTKFSRSDYLRFKSENRIVPDGVNAKLLGCHGPLASRQ 678
+KIIVSRKWGFTK +R+DY R KSENRI+PDGVNAKLLGCHG LA+R+
Sbjct: 163 QKIIVSRKWGFTKINRADYPRLKSENRILPDGVNAKLLGCHGRLANRK 210
BLAST of FC875371 vs. ExPASy Swiss-Prot
Match: RL10_VITRI (60S ribosomal protein L10 OS=Vitis riparia GN=RPL10 PE=2 SV=1) HSP 1 Score: 333.183 bits (853), Expect = 8.184e-91 Identity = 160/173 (92.49%), Postives = 164/173 (94.80%), Query Frame = 3
Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKNHCQQKVGF 566
MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV+IGQVLLSVRCKD NS HAQEALRRAKFKFP RQK +K GF
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPARQKIIVSRKWGF 173 HSP 2 Score: 91.6633 bits (226), Expect = 4.147e-18 Identity = 40/52 (76.92%), Postives = 49/52 (94.23%), Query Frame = 1
Query: 523 FLVAKKIIVSRKWGFTKFSRSDYLRFKSENRIVPDGVNAKLLGCHGPLASRQ 678
F +KIIVSRKWGFTKF+R+DY+++KS+NRI+PDGVNAKLLGCHGPLA+RQ
Sbjct: 159 FPARQKIIVSRKWGFTKFNRTDYIKWKSQNRILPDGVNAKLLGCHGPLANRQ 210
BLAST of FC875371 vs. ExPASy Swiss-Prot
Match: RL10_SOLME (60S ribosomal protein L10 OS=Solanum melongena GN=RPL10 PE=2 SV=1) HSP 1 Score: 332.798 bits (852), Expect = 1.069e-90 Identity = 161/173 (93.06%), Postives = 163/173 (94.22%), Query Frame = 3
Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKNHCQQKVGF 566
MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQG CARVAIGQVLLSVRCKD NS HAQEALRRAKFKFPGRQK +K GF
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDGNSNHAQEALRRAKFKFPGRQKIIVSRKWGF 173 HSP 2 Score: 91.2781 bits (225), Expect = 5.417e-18 Identity = 42/48 (87.50%), Postives = 47/48 (97.92%), Query Frame = 1
Query: 535 KKIIVSRKWGFTKFSRSDYLRFKSENRIVPDGVNAKLLGCHGPLASRQ 678
+KIIVSRKWGFTKFSR+DYL++KSENRIVPDGVNAKLLG HGPLA+RQ
Sbjct: 163 QKIIVSRKWGFTKFSRTDYLKYKSENRIVPDGVNAKLLGNHGPLAARQ 210
BLAST of FC875371 vs. ExPASy Swiss-Prot
Match: RL101_ORYSJ (60S ribosomal protein L10-1 OS=Oryza sativa subsp. japonica GN=SC34 PE=2 SV=1) HSP 1 Score: 328.176 bits (840), Expect = 2.633e-89 Identity = 158/173 (91.33%), Postives = 164/173 (94.80%), Query Frame = 3
Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKNHCQQKVGF 566
MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCK+SN+ HA+EALRRAKFKFPGRQK +K GF
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGF 173 HSP 2 Score: 68.9366 bits (167), Expect = 2.879e-11 Identity = 31/47 (65.96%), Postives = 39/47 (82.98%), Query Frame = 1
Query: 535 KKIIVSRKWGFTKFSRSDYLRFKSENRIVPDGVNAKLLGCHGPLASR 675
+KII SRKWGFTKF+R +Y++ K+E RI+ DGVNA+LLG HG LA R
Sbjct: 163 QKIIHSRKWGFTKFTREEYVKLKAEGRIMSDGVNAQLLGSHGRLAKR 209
BLAST of FC875371 vs. ExPASy Swiss-Prot
Match: RL101_ORYSI (60S ribosomal protein L10-1 OS=Oryza sativa subsp. indica GN=SC34 PE=2 SV=2) HSP 1 Score: 328.176 bits (840), Expect = 2.633e-89 Identity = 158/173 (91.33%), Postives = 164/173 (94.80%), Query Frame = 3
Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKNHCQQKVGF 566
MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCK+SN+ HA+EALRRAKFKFPGRQK +K GF
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGF 173 HSP 2 Score: 68.9366 bits (167), Expect = 2.879e-11 Identity = 31/47 (65.96%), Postives = 39/47 (82.98%), Query Frame = 1
Query: 535 KKIIVSRKWGFTKFSRSDYLRFKSENRIVPDGVNAKLLGCHGPLASR 675
+KII SRKWGFTKF+R +Y++ K+E RI+ DGVNA+LLG HG LA R
Sbjct: 163 QKIIHSRKWGFTKFTREEYVKLKAEGRIMSDGVNAQLLGSHGRLAKR 209
BLAST of FC875371 vs. ExPASy Swiss-Prot
Match: RL103_ARATH (60S ribosomal protein L10-3 OS=Arabidopsis thaliana GN=RPL10C PE=2 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 6.485e-88 Identity = 155/173 (89.60%), Postives = 162/173 (93.64%), Query Frame = 3
Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKNHCQQKVGF 566
MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFGK GTCARVAIGQVLLSVRCKD++ +HAQEALRRAKFKFPGRQK +K GF
Sbjct: 1 MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKDNHGVHAQEALRRAKFKFPGRQKIIVSRKWGF 173 HSP 2 Score: 74.3294 bits (181), Expect = 6.852e-13 Identity = 33/48 (68.75%), Postives = 41/48 (85.42%), Query Frame = 1
Query: 535 KKIIVSRKWGFTKFSRSDYLRFKSENRIVPDGVNAKLLGCHGPLASRQ 678
+KIIVSRKWGFTKF+R++Y + ++ RIVPDGVNAK L HGPLA+RQ
Sbjct: 163 QKIIVSRKWGFTKFNRAEYTKLRAMKRIVPDGVNAKFLSNHGPLANRQ 210
BLAST of FC875371 vs. ExPASy Swiss-Prot
Match: RL101_ARATH (60S ribosomal protein L10-1 OS=Arabidopsis thaliana GN=RPL10A PE=2 SV=1) HSP 1 Score: 322.013 bits (824), Expect = 1.887e-87 Identity = 155/173 (89.60%), Postives = 161/173 (93.06%), Query Frame = 3
Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKNHCQQKVGF 566
MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFGK GTCARVAIGQVLLSVRCKD++ HAQEALRRAKFKFPGRQK +K GF
Sbjct: 1 MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGF 173 HSP 2 Score: 80.8777 bits (198), Expect = 7.321e-15 Identity = 34/48 (70.83%), Postives = 42/48 (87.50%), Query Frame = 1
Query: 535 KKIIVSRKWGFTKFSRSDYLRFKSENRIVPDGVNAKLLGCHGPLASRQ 678
+KIIVSRKWGFTKF+R+D+ + + E R+VPDGVNAK L CHGPLA+RQ
Sbjct: 163 QKIIVSRKWGFTKFNRADFTKLRQEKRVVPDGVNAKFLSCHGPLANRQ 210
BLAST of FC875371 vs. ExPASy Swiss-Prot
Match: RL102_ARATH (60S ribosomal protein L10-2 OS=Arabidopsis thaliana GN=RPL10B PE=2 SV=2) HSP 1 Score: 320.857 bits (821), Expect = 4.203e-87 Identity = 154/173 (89.02%), Postives = 161/173 (93.06%), Query Frame = 3
Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKNHCQQKVGF 566
MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFGK GTCARVAIGQVLLSVRCKD++ HAQEALRRAKFKFPGRQK +K GF
Sbjct: 1 MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGF 173 HSP 2 Score: 82.8037 bits (203), Expect = 1.927e-15 Identity = 36/48 (75.00%), Postives = 42/48 (87.50%), Query Frame = 1
Query: 535 KKIIVSRKWGFTKFSRSDYLRFKSENRIVPDGVNAKLLGCHGPLASRQ 678
+KIIVSRKWGFTKF+R+DY + + E RIVPDGVNAK L CHGPLA+RQ
Sbjct: 163 QKIIVSRKWGFTKFNRADYTKLRQEKRIVPDGVNAKFLSCHGPLANRQ 210
BLAST of FC875371 vs. ExPASy Swiss-Prot
Match: RL102_ORYSJ (60S ribosomal protein L10-2 OS=Oryza sativa subsp. japonica GN=SG12 PE=2 SV=1) HSP 1 Score: 320.472 bits (820), Expect = 5.490e-87 Identity = 155/173 (89.60%), Postives = 161/173 (93.06%), Query Frame = 3
Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKNHCQQKVGF 566
MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEF CVHLVSWEKENV+SEALEAARIACNKYM K AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCK +N++HA EALRRAKFKFPGRQK +K GF
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGF 173 HSP 2 Score: 80.4925 bits (197), Expect = 9.561e-15 Identity = 36/47 (76.60%), Postives = 42/47 (89.36%), Query Frame = 1
Query: 535 KKIIVSRKWGFTKFSRSDYLRFKSENRIVPDGVNAKLLGCHGPLASR 675
+KII SRKWGFTKFSR +Y+R KSE RI+PDGVNAKLLGCHG L++R
Sbjct: 163 QKIIESRKWGFTKFSRDEYVRLKSEGRIMPDGVNAKLLGCHGRLSAR 209
BLAST of FC875371 vs. ExPASy Swiss-Prot
Match: RL102_ORYSI (60S ribosomal protein L10-2 OS=Oryza sativa subsp. indica GN=SG12 PE=2 SV=2) HSP 1 Score: 320.472 bits (820), Expect = 5.490e-87 Identity = 155/173 (89.60%), Postives = 161/173 (93.06%), Query Frame = 3
Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKNHCQQKVGF 566
MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEF CVHLVSWEKENV+SEALEAARIACNKYM K AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCK +N++HA EALRRAKFKFPGRQK +K GF
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGF 173 HSP 2 Score: 80.4925 bits (197), Expect = 9.561e-15 Identity = 36/47 (76.60%), Postives = 42/47 (89.36%), Query Frame = 1
Query: 535 KKIIVSRKWGFTKFSRSDYLRFKSENRIVPDGVNAKLLGCHGPLASR 675
+KII SRKWGFTKFSR +Y+R KSE RI+PDGVNAKLLGCHG L++R
Sbjct: 163 QKIIESRKWGFTKFSRDEYVRLKSEGRIMPDGVNAKLLGCHGRLSAR 209 The following BLAST results are available for this feature:
BLAST of FC875371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875371 ID=FC875371; Name=FC875371; organism=Citrus clementina; type=EST; length=698bpback to top |