FC875372
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875372 vs. ExPASy Swiss-Prot
Match: IN21B_ORYSJ (Protein IN2-1 homolog B OS=Oryza sativa subsp. japonica GN=GSTZ5 PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 8.984e-52 Identity = 100/164 (60.98%), Postives = 123/164 (75.00%), Query Frame = 1 Query: 1 EKVYPVNKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKFADELFSHIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKELVEFYRSR 486 EKVYP NKVP+LEHN +V GESLDL+KY+D+NFEGP+LLPDD EK++FA+EL ++ D F Y+S KGD +A A D +E AL KF+DGPFFLGQFS VDIAY+PF+ERFQIF S YDIT GRP L +IEE+NK+ AY TK DP+ L+E + R Sbjct: 77 EKVYPENKVPSLEHNNQVKGESLDLVKYIDTNFEGPALLPDDSEKQQFAEELLAYTDAFNKASYSSIVAKGDVCDEAVAALDKIEAALSKFNDGPFFLGQFSLVDIAYVPFIERFQIFFSGIKNYDITKGRPNLQKFIEEVNKIHAYTETKQDPQFLLEHTKKR 240
BLAST of FC875372 vs. ExPASy Swiss-Prot
Match: IN21B_ORYSI (Protein IN2-1 homolog B OS=Oryza sativa subsp. indica GN=GSTZ5 PE=1 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 8.984e-52 Identity = 100/164 (60.98%), Postives = 123/164 (75.00%), Query Frame = 1 Query: 1 EKVYPVNKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKFADELFSHIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKELVEFYRSR 486 EKVYP NKVP+LEHN +V GESLDL+KY+D+NFEGP+LLPDD EK++FA+EL ++ D F Y+S KGD +A A D +E AL KF+DGPFFLGQFS VDIAY+PF+ERFQIF S YDIT GRP L +IEE+NK+ AY TK DP+ L+E + R Sbjct: 77 EKVYPENKVPSLEHNNQVKGESLDLVKYIDTNFEGPALLPDDSEKQQFAEELLAYTDAFNKASYSSIVAKGDVCDEAVAALDKIEAALSKFNDGPFFLGQFSLVDIAYVPFIERFQIFFSGIKNYDITKGRPNLQKFIEEVNKIHAYTETKQDPQFLLEHTKKR 240
BLAST of FC875372 vs. ExPASy Swiss-Prot
Match: IN21A_ORYSJ (Protein IN2-1 homolog A OS=Oryza sativa subsp. japonica GN=Os03g0283200 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 3.906e-47 Identity = 91/163 (55.83%), Postives = 120/163 (73.62%), Query Frame = 1 Query: 1 EKVYPVNKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKFADELFSHIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKELVEFYRS 483 EKVY VP+LEHNGK++GESLDLIKY+DS+FEGP+LLP+DPEKR+FADEL ++ + FT +Y+ K D + + A D +E AL KF DGPFFLGQFS VDIAY+ +ER QI+ S KY+IT GRP L +IEE+N+++AY TK DP L++ ++ Sbjct: 76 EKVYEQGTVPSLEHNGKIMGESLDLIKYIDSHFEGPALLPEDPEKRQFADELIAYANAFTKALYSPLISKADLSAETVAALDKIEAALSKFGDGPFFLGQFSLVDIAYVTIIERIQIYYSHIRKYEITNGRPNLEKFIEEINRIEAYTQTKNDPLYLLDLAKT 238
BLAST of FC875372 vs. ExPASy Swiss-Prot
Match: IN21_MAIZE (Protein IN2-1 OS=Zea mays GN=IN2-1 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.452e-41 Identity = 84/163 (51.53%), Postives = 111/163 (68.10%), Query Frame = 1 Query: 1 EKVYPVNKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKFADELFSHIDTFTNDVYTSFKGDPA--KQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKELVEFYRS 483 +KVY VP+LEH+ +V GESLDLI+Y+DSNF+GP+LLP+D KR+FADELF+ + FT +Y+ A + A D LE L KFDDGPFFLGQFS D+AY+ +ER QI+ S YDI GRP L +I+E+NK++AY TK DP L++ +S Sbjct: 76 DKVYAQGTVPSLEHDSEVRGESLDLIRYIDSNFDGPALLPEDAAKRQFADELFASANAFTKALYSPLLSHAAVSDEVVAALDKLEADLSKFDDGPFFLGQFSLADVAYVTILERVQIYYSHLRNYDIAQGRPNLQEFIDEMNKIEAYAQTKNDPLFLLDLAKS 238
BLAST of FC875372 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.550e-11 Identity = 55/175 (31.43%), Postives = 82/175 (46.86%), Query Frame = 1 Query: 22 KVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKFA--------DELFSHIDTFTNDVYTSFKGDPAKQAGPAFDYLEKALD-KFDDGPFFLG-QFSQVDIA-------YIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKELVEFYRSRFVA 495 KVP L HNGK I ES+ +++Y+D FEGPS+LP DP R A D++ + ++TF KG+ ++ + K LD + D FF+G +F DIA F E + + L K+ P + W +E K + EL+ F+R+RF A Sbjct: 52 KVPVLIHNGKPIVESMVILEYIDETFEGPSILPKDPYDRALARFWSKFLGDKVAAVVNTFFR------KGEEQEKGKEEVYEMLKVLDNELKDKKFFVGDKFGFADIAANLVGFWLGVFEEGYGVVLVTSEKF------PNFSRWRDEYINCSQVKESLPSRDELLAFFRARFQA 214
BLAST of FC875372 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.025e-11 Identity = 54/165 (32.73%), Postives = 78/165 (47.27%), Query Frame = 1 Query: 22 KVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKFADELFSHIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALD-KFDDGPFFLG-QFSQVDIAYIPFVERFQIFLSEEFKYDITAGR---PKLAAWIEELNKLDAYKSTKADPKELVEFYRSRFVA 495 KVP L HNGK I ES+ +++Y+D FEGPS+LP DP R A +D V +F KG+ ++ + K LD + D FF G +F DIA + F + + EE D+ P + W +E + EL+ F+R+RF A Sbjct: 52 KVPVLIHNGKPIVESMIILEYIDETFEGPSILPKDPYDRALARFWAKFLDDKVAAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFAGDKFGFADIA--ANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDELLAFFRARFQA 214
BLAST of FC875372 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.511e-11 Identity = 53/160 (33.12%), Postives = 74/160 (46.25%), Query Frame = 1 Query: 22 KVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKFADELFSHIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALD-KFDDGPFFLG-QFSQVDIAYIPFVERFQIFLSEEFKYDITAGR-PKLAAWIEELNKLDAYKSTKADPKELVEFYRSR 486 KVP L HNGK I ES+ +++Y+D FEGPS+LP DP R A +D V +F KG+ ++ + K LD + D FF+G +F DIA +F +T+ + P W E K + EL+ FYRSR Sbjct: 52 KVPVLIHNGKRIVESMVILEYIDETFEGPSILPKDPYDRALARFWAKFLDDKVPAVVKTFLRKGEEQEKDKEEVCEMLKVLDNELKDKKFFVGDKFGFADIAANLVAFWLGVFEEASGVVLVTSEKFPNFCKWRGEYINCSQIKESLPPRDELLAFYRSR 211 The following BLAST results are available for this feature:
BLAST of FC875372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875372 ID=FC875372; Name=FC875372; organism=Citrus clementina; type=EST; length=584bpback to top |