FC875388

Overview
NameFC875388
Unique NameFC875388
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875388 vs. ExPASy Swiss-Prot
Match: TPS6_ARATH (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 OS=Arabidopsis thaliana GN=TPS6 PE=1 SV=2)

HSP 1 Score: 252.292 bits (643), Expect = 1.882e-66
Identity = 119/172 (69.19%), Postives = 140/172 (81.40%), Query Frame = 2
Query:    2 WEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLAT 517
            WE C    D  WK+IAEPVM+LYTETTDGS IEDKETA+VW ++ ADP FGSCQAKELLDHLE+VLANEPV VKRGQ+ VEVKPQGVSKG++ + ++S M+ RG  P+FVLCIGDDRSDEDMFE I  +   PS+   AE+FACTVGQKPS AKYYLDDT E++ L+ GLA+
Sbjct:  681 WENCVAAVDCSWKQIAEPVMELYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKRGQNYVEVKPQGVSKGLIARRMLSMMQERGTLPEFVLCIGDDRSDEDMFEVICSSTEGPSIAPRAEIFACTVGQKPSKAKYYLDDTTEIVRLMHGLAS 852          
BLAST of FC875388 vs. ExPASy Swiss-Prot
Match: TPS5_ARATH (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 OS=Arabidopsis thaliana GN=TPS5 PE=1 SV=2)

HSP 1 Score: 249.98 bits (637), Expect = 9.341e-66
Identity = 116/171 (67.84%), Postives = 143/171 (83.63%), Query Frame = 2
Query:    2 WEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLA 514
            WE  SL   F+WK+IAEPVM+LYTETTDGS IE KETA+VW++Q ADP FGSCQAKEL++HLE+VL N+PV VK GQ +VEVKPQGV+KG+V + L++TM+ +GK  DF+LC+GDDRSDEDMFE I  A   P++  +AE+FACTVGQKPS AKYYLDDTAE+I +L+GLA
Sbjct:  670 WETSSLVSGFEWKQIAEPVMRLYTETTDGSTIETKETALVWNYQFADPDFGSCQAKELMEHLESVLTNDPVSVKTGQQLVEVKPQGVNKGLVAERLLTTMQEKGKLLDFILCVGDDRSDEDMFEVIMSAKDGPALSPVAEIFACTVGQKPSKAKYYLDDTAEIIRMLDGLA 840          
BLAST of FC875388 vs. ExPASy Swiss-Prot
Match: TPS11_ARATH (Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 OS=Arabidopsis thaliana GN=TPS11 PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.349e-64
Identity = 127/179 (70.95%), Postives = 144/179 (80.45%), Query Frame = 2
Query:    2 WEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMR-SRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLATESVHSK 535
            WE   L  D  WK+IA+PVM  Y E TDGSFIE+KE+A+VWHHQ AD  FGS QAKELLDHLE+VL NEPVVVKRGQHIVEVKPQGVSKG VV++LI+TMR ++GK PDF+LCIGDDRSDEDMF+SI +   D S  G+ EVFACTVGQKPS AKYYLDDT  VI +LE LA+ S  SK
Sbjct:  662 WETSELPADLSWKKIAKPVMNHYMEATDGSFIEEKESAMVWHHQEADHSFGSWQAKELLDHLESVLTNEPVVVKRGQHIVEVKPQGVSKGKVVEHLIATMRNTKGKRPDFLLCIGDDRSDEDMFDSIVKH-QDVSSIGLEEVFACTVGQKPSKAKYYLDDTPSVIKMLEWLASASDGSK 839          
BLAST of FC875388 vs. ExPASy Swiss-Prot
Match: TPS9_ARATH (Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 OS=Arabidopsis thaliana GN=TPS9 PE=1 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 5.126e-64
Identity = 117/185 (63.24%), Postives = 141/185 (76.22%), Query Frame = 2
Query:    2 WEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLATESVHSKSASYQES 556
            WE C  + + +WK + EPVM+ Y + TDGS IE KE+A+VWHHQ ADP FG+CQAKELLDHLE+VLANEPVVVKRGQHIVEVKPQGVSKG+ V+ +I  M   G  PD V+CIGDDRSDEDMFESI   V +P +P   E+FACTVG+KPS AKY+LDD ++V+ LL GLA  +  SK    Q+S
Sbjct:  670 WETCYSSAEAEWKTMVEPVMRSYMDATDGSTIEYKESALVWHHQDADPDFGACQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAVEKVIHQMVEDGNPPDMVMCIGDDRSDEDMFESILSTVTNPDLPMPPEIFACTVGRKPSKAKYFLDDVSDVLKLLGGLAAATSSSKPEYQQQS 854          
BLAST of FC875388 vs. ExPASy Swiss-Prot
Match: TPS8_ARATH (Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8 OS=Arabidopsis thaliana GN=TPS8 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.649e-62
Identity = 115/181 (63.54%), Postives = 137/181 (75.69%), Query Frame = 2
Query:    2 WEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLATESVHSKSAS 544
            WE C    D +W+ + EPVM+ Y E TDG+ IE KE+A+VWHHQ ADP FGSCQAKE+LDHLE+VLANEPVVVKRGQHIVEVKPQGVSKG+  + +I  M  RG+ P+ V+CIGDDRSDEDMFESI   V +P +    EVFACTVG+KPS AKY+LDD A+V+ LL GL   S   K +S
Sbjct:  665 WETCYSPTDTEWRSMVEPVMRSYMEATDGTSIEFKESALVWHHQDADPDFGSCQAKEMLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAAEKVIREMVERGEPPEMVMCIGDDRSDEDMFESILSTVTNPELLVQPEVFACTVGRKPSKAKYFLDDEADVLKLLRGLGDSSSSLKPSS 845          
BLAST of FC875388 vs. ExPASy Swiss-Prot
Match: TPS10_ARATH (Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 OS=Arabidopsis thaliana GN=TPS10 PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.069e-61
Identity = 110/174 (63.22%), Postives = 136/174 (78.16%), Query Frame = 2
Query:    2 WEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLATES 523
            WE   L+ D +WK++ EP+M+LYTETTDGS IE KE+A+VWHHQ ADP FGSCQAKELLDHLE VL NEPV+V RG  IVEVKPQGVSKG+V   ++S M   G +PDFV+CIGDDRSDE+MFE+I   ++  S     E+FACTVG+KPS AKY+LD+ ++V+ LL+GLA  S
Sbjct:  670 WETSGLSDDLEWKKVVEPIMRLYTETTDGSNIEAKESALVWHHQDADPDFGSCQAKELLDHLETVLVNEPVIVNRGHQIVEVKPQGVSKGLVTGKILSRMLEDGIAPDFVVCIGDDRSDEEMFENISTTLSAQSSSMSTEIFACTVGRKPSKAKYFLDEVSDVVKLLQGLANTS 843          
BLAST of FC875388 vs. ExPASy Swiss-Prot
Match: TPS7_ARATH (Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 OS=Arabidopsis thaliana GN=TPS7 PE=1 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.965e-59
Identity = 117/189 (61.90%), Postives = 141/189 (74.60%), Query Frame = 2
Query:    2 WEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLATESVHSKSASYQESHEDL 568
            WE C  + DF W +I EPVMK YTE+TDGS IE KE+A+VW ++ ADP FGS QAKE+L+HLE+VLANEPV VK G +IVEVKPQGVSKG V + + S+M  +GK  DFVLCIGDDRSDEDMFE+I  A++   +   A VFACTVGQKPS AKYYLDDT EV  +LE LA E+  + + S +E  E L
Sbjct:  664 WETCGQSSDFGWMQIVEPVMKQYTESTDGSSIEIKESALVWQYRDADPGFGSLQAKEMLEHLESVLANEPVAVKSGHYIVEVKPQGVSKGSVSEKIFSSMAGKGKPVDFVLCIGDDRSDEDMFEAIGNAMSKRLLCDNALVFACTVGQKPSKAKYYLDDTTEVTCMLESLA-EASEASNFSMRELDEAL 851          
BLAST of FC875388 vs. ExPASy Swiss-Prot
Match: TPSB_DICDI (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] B OS=Dictyostelium discoideum GN=tpsB PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.488e-23
Identity = 56/163 (34.36%), Postives = 96/163 (58.90%), Query Frame = 2
Query:   26 DFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLA 514
            +  WK+    +M+ + + T GS  E K+  I WH+++ADP FG  QAKEL+  L +V    P+ +  G+  +EVKP G++KG +VK ++  +       DF+LCIGDD++DEDMF+++       +VP    +  C   ++ + A+  ++ ++EV+ LL  L+
Sbjct:  638 EVQWKDTVLSIMQDFEDRTPGSMTETKQVNITWHYRNADPDFGQFQAKELIAQLRSVANKYPLDILSGKKAIEVKPIGINKGEIVKMILQKI-----DADFILCIGDDKTDEDMFKALY------NVPSFT-IRVCGDLEESTKARGVVESSSEVLTLLNRLS 788          
BLAST of FC875388 vs. ExPASy Swiss-Prot
Match: TPP1_SCHPO (Trehalose-phosphatase OS=Schizosaccharomyces pombe GN=tpp1 PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.179e-22
Identity = 61/166 (36.75%), Postives = 95/166 (57.23%), Query Frame = 2
Query:   26 DFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANE-PVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVG--QKPSMAKYYLDDTAEVINLLEGLA 514
            D  WK+    + + YT+ T GS IE+K  A+ WH++ ADP  G+ QA E    LE ++ ++  V + RG+  +EV+P  ++KG +VK ++S+       P F+ C GDDR+DEDMF S+ +             FA T+G  +K S+A + + D A VI++L  LA
Sbjct:  653 DMSWKKEVRRIFQYYTDRTQGSSIEEKRCAMTWHYRKADPENGAFQALECEALLEELVCSKYDVEIMRGKANLEVRPSSINKGGIVKQILSSY-PEDSLPSFIFCAGDDRTDEDMFRSLHKNTRINKETS----FAVTIGSDKKLSIADWCIADPANVIDILADLA 813          
BLAST of FC875388 vs. ExPASy Swiss-Prot
Match: TPS2_ARATH (Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2 OS=Arabidopsis thaliana GN=TPS2 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.461e-18
Identity = 57/187 (30.48%), Postives = 97/187 (51.87%), Query Frame = 2
Query:   26 DFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHL-ENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTM---RSRGKSPDFVLCIGDD-RSDEDMFESIEQAVADPSVPGIAEV-----FACTVGQKPSMAKYYLDDTAEVINLLEGLATESVHSKSASYQES 556
            + DW +  + V K +T+ T  S+ E  ET++VW++++AD  FG  QA++LL +L    ++N  V V RG H VEV   G +KG  +  ++  +   +S     DFV C G     DED++   E  +     P   ++     F+  +GQ  + A+Y +D    V++LL  LA  +  + + S+ +S
Sbjct:  600 NLDWVDGVKNVFKYFTDRTPRSYFEASETSLVWNYEYADVEFGRAQARDLLQYLWAGPISNASVDVVRGNHSVEVHAIGETKGAAIGRILGEIVHRKSMTTPIDFVFCSGYFLEKDEDIYTFFESKILSSKSPNGLDLKKENYFSAAIGQARTKARYVIDSAHGVVDLLHKLAVVADTTMTDSFSDS 786          
The following BLAST results are available for this feature:
BLAST of FC875388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
TPS6_ARATH1.882e-6669.19Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
TPS5_ARATH9.341e-6667.84Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
TPS11_ARATH1.349e-6470.95Probable alpha,alpha-trehalose-phosphate synthase ... [more]
TPS9_ARATH5.126e-6463.24Probable alpha,alpha-trehalose-phosphate synthase ... [more]
TPS8_ARATH1.649e-6263.54Probable alpha,alpha-trehalose-phosphate synthase ... [more]
TPS10_ARATH1.069e-6163.22Probable alpha,alpha-trehalose-phosphate synthase ... [more]
TPS7_ARATH4.965e-5961.90Probable alpha,alpha-trehalose-phosphate synthase ... [more]
TPSB_DICDI7.488e-2334.36Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
TPP1_SCHPO2.179e-2236.75Trehalose-phosphatase OS=Schizosaccharomyces pombe... [more]
TPS2_ARATH1.461e-1830.48Probable alpha,alpha-trehalose-phosphate synthase ... [more]

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Properties
Property NameValue
Genbank descriptionC31403D05EF CTVClemen1 Citrus clementina cDNA clone C31403D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875388 ID=FC875388; Name=FC875388; organism=Citrus clementina; type=EST; length=706bp
ATGGGAAATTTGCTCGTTGACAAGAGACTTTGATTGGAAAGAGATTGCAG
AACCTGTAATGAAGCTTTATACTGAGACAACCGATGGCTCTTTCATAGAG
GATAAAGAAACTGCAATTGTGTGGCACCACCAGCACGCCGACCCTCATTT
TGGCTCATGCCAGGCTAAAGAGCTTCTTGACCACTTGGAAAATGTTCTTG
CTAATGAGCCTGTTGTTGTCAAAAGAGGCCAACACATTGTTGAGGTCAAG
CCACAGGGAGTAAGCAAAGGCATTGTTGTAAAAAACTTGATTTCAACTAT
GCGAAGTAGGGGGAAGTCTCCAGATTTTGTGCTGTGCATAGGGGATGACC
GTTCTGATGAAGATATGTTCGAGAGCATTGAGCAAGCTGTTGCCGATCCA
TCGGTACCAGGGATTGCAGAAGTATTTGCGTGTACAGTCGGTCAGAAACC
GAGCATGGCTAAATATTACCTTGATGATACTGCAGAAGTCATAAACTTGC
TTGAAGGCCTTGCTACAGAATCTGTACATTCTAAGTCGGCATCCTACCAG
GAATCACATGAAGACTTGTTACTTTGAATAAAAGGTTAGAATGAACATAG
TGAAAAAGTCAAATCTGGGCTTAGGGCAATTGATGATACAGATATCCTTG
TACAGAAAAATACTTTTTTCTTTTCTTTTTTTTTTTATAACTTTTACAGG
TTCATT
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