FC875423
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875423 vs. ExPASy Swiss-Prot
Match: CML44_ARATH (Probable calcium-binding protein CML44 OS=Arabidopsis thaliana GN=CML44 PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.313e-27 Identity = 69/163 (42.33%), Postives = 98/163 (60.12%), Query Frame = 3 Query: 105 LTANDLQRIFEKLDRNGDGLVSLEELNWVLERIG-VHFTLEGLEALVEKPSLCFDEFL-FFCDSIISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKTFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMML 587 +T NDL+R+F+ LD+N DGLV+L+EL W+L+++G T + LE +V K SL DEFL F+ D+++ + + F+VFDVNGDG+I++EEL+ VL RLG +E + DC MI V+D N DG +DFEEFKNM+L Sbjct: 6 ITTNDLRRMFKTLDKNQDGLVTLDELLWILDKLGWAEHTPDELELIVGKQSLDLDEFLRFYYDAVLDSKGSKKNIDVVADNDEA---------------IARAFNVFDVNGDGYISAEELRDVLERLGFEEEAKAWDCGRMIRVHDKNLDGFVDFEEFKNMIL 153
BLAST of FC875423 vs. ExPASy Swiss-Prot
Match: CML3_ARATH (Calmodulin-like protein 3 OS=Arabidopsis thaliana GN=CML3 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17 Identity = 54/156 (34.62%), Postives = 80/156 (51.28%), Query Frame = 3 Query: 117 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEGLEALVEKPSLCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKTFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 584 +L RIF+ DRNGDG ++ +ELN LE +G++ + L ++EK L D ++ + + F+VFD N DGFIT EEL+SVLA LGL ++ +DC+ MI D + DG+++F+EFK MM Sbjct: 5 ELARIFQMFDRNGDGKITKQELNDSLENLGIYIPDKDLVQMIEKIDLNGDGYV-------------------DIEEFGGLYQTIMEERDEEEDMREAFNVFDQNRDGFITVEELRSVLASLGLKQGRTLEDCKRMISKVDVDGDGMVNFKEFKQMM 141
BLAST of FC875423 vs. ExPASy Swiss-Prot
Match: CML28_ORYSJ (Probable calcium-binding protein CML28 OS=Oryza sativa subsp. japonica GN=CML28 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.981e-16 Identity = 53/166 (31.93%), Postives = 84/166 (50.60%), Query Frame = 3 Query: 105 LTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEGLEALVEKPSL----CFD--EFLFFCDSIISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKTFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 584 + + +L+++F+ D+NGDG ++ +EL + G+ + L+A ++K C D EF SI+ + + F+VFD NGDGFIT +EL+SVL+ LGL +++ DCR MI + D + DG +DF+EFK MM Sbjct: 1 MDSTELRKVFKMFDKNGDGRITKKELGESFKNFGIFIPDDELDATMDKIDANGDGCVDVEEFGLLYRSILGDDAAGRAPRTAAAAIGGEGGAPDDEDEG----MREAFNVFDQNGDGFITVDELRSVLSSLGLKHGRTADDCRRMISMVDADGDGRVDFKEFKQMM 162
BLAST of FC875423 vs. ExPASy Swiss-Prot
Match: CML2_ARATH (Calmodulin-like protein 2 OS=Arabidopsis thaliana GN=CML2 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.317e-14 Identity = 48/162 (29.63%), Postives = 77/162 (47.53%), Query Frame = 3 Query: 117 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEGLEALVEKP------SLCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKTFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 584 +L R+F+ D+NGDG ++ EL + +G+ + ++ K ++ DEF ++ + + F VFD NGDGFIT EEL+SVLA +GL ++ +DC+ MI D + DG+++F+EFK MM Sbjct: 5 ELSRVFQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDIDEFGSLYQEMVEEKEEEED-------------------------MREAFRVFDQNGDGFITDEELRSVLASMGLKQGRTLEDCKKMISKVDVDGDGMVNFKEFKQMM 141
BLAST of FC875423 vs. ExPASy Swiss-Prot
Match: CML25_ARATH (Probable calcium-binding protein CML25 OS=Arabidopsis thaliana GN=CML25 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12 Identity = 50/156 (32.05%), Postives = 74/156 (47.44%), Query Frame = 3 Query: 117 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEGLEALVEKPSLCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKTFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 584 +L+ +F+K D NGDG +S +EL ++ +G E LE + + D ++ F + + L FSV+D++G+G I++EEL VL LG DE S +CR MI D + DG +DFEEFK MM Sbjct: 37 ELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEFV-------------------ELNTKGMDQNDVLENLKDAFSVYDIDGNGSISAEELHEVLRSLG--DECSIAECRKMIGGVDKDGDGTIDFEEFKIMM 171
BLAST of FC875423 vs. ExPASy Swiss-Prot
Match: CML10_ORYSJ (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica GN=CML10 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.964e-11 Identity = 49/162 (30.25%), Postives = 71/162 (43.83%), Query Frame = 3 Query: 99 APLTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEGLEALVEKPSLCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKTFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 584 AP +++R+F K D NGDG +S EL + E +G T + L ++ + D F+ + L F VFD +G+G I++ EL VL LG ++ + Q CR MI D N DG++ FEEFK MM Sbjct: 34 APTPEEEMERVFRKFDANGDGRISRSELGALFESLGHAATDDELARMMAEADADGDGFISLDE------------------FAALNATASGDAAAVEEDLRHAFRVFDADGNGTISAAELARVLHGLG--EKATVQQCRRMIEGVDQNGDGLISFEEFKVMM 175
BLAST of FC875423 vs. ExPASy Swiss-Prot
Match: CML23_ARATH (Probable calcium-binding protein CML23 OS=Arabidopsis thaliana GN=CML23 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.178e-11 Identity = 42/157 (26.75%), Postives = 81/157 (51.59%), Query Frame = 3 Query: 117 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEGLEALVEKPSLCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKTFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMML 587 D++++F++ D+N DG +S++EL V+ + + + E +A++++ L + F+ + + L + F ++D++ +G I++ EL SV+ LG ++ S QDC+ MI D++ DG +DFEEFK MM+ Sbjct: 15 DIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDEFVA-----------------LFQISDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLG--EKCSIQDCQRMINKVDSDGDGCVDFEEFKKMMM 152 The following BLAST results are available for this feature:
BLAST of FC875423 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875423 ID=FC875423; Name=FC875423; organism=Citrus clementina; type=EST; length=724bpback to top |