FC875433

Overview
NameFC875433
Unique NameFC875433
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9695 contig Ccv1_Contig9695:48..726. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875433 vs. ExPASy Swiss-Prot
Match: AMP2B_ARATH (Methionine aminopeptidase 2B OS=Arabidopsis thaliana GN=MAP2B PE=2 SV=2)

HSP 1 Score: 384.415 bits (986), Expect = 2.913e-106
Identity = 184/196 (93.88%), Postives = 192/196 (97.96%), Query Frame = 3
Query:    3 STNTGIKEAGIDVRLCDIGAAIQEVMESYEVEINGKVFQVKSIRNLNGHSIGRYQIHAGKSVPIVKGGEQTKMEEGEFFAIETFASTGKGYVREDLECSHYMKNFDVGHIPLRLPRAKQLLATINKNFSTLAFCRRYLDRLGETKYLMALKNLCDTGIVQPYPPLCDIKGSYVSQFEHTILLRPTCKEVISRGDDY 590
            +T TGIKEAGIDVRLCDIGAAIQEVMESYEVEINGKVFQVKSIRNLNGHSIG YQIHAGKSVPIVKGGEQTKMEEGEF+AIETF STGKGYVREDLECSHYMKNFD GH+PLRLPRAKQLLATINKNFSTLAFCRRYLDR+GETKYLMALKNLCD+GIVQPYPPLCD+KGSYVSQFEHTILLRPTCKEV+S+GDDY
Sbjct:  244 ATYTGIKEAGIDVRLCDIGAAIQEVMESYEVEINGKVFQVKSIRNLNGHSIGPYQIHAGKSVPIVKGGEQTKMEEGEFYAIETFGSTGKGYVREDLECSHYMKNFDAGHVPLRLPRAKQLLATINKNFSTLAFCRRYLDRIGETKYLMALKNLCDSGIVQPYPPLCDVKGSYVSQFEHTILLRPTCKEVLSKGDDY 439          
BLAST of FC875433 vs. ExPASy Swiss-Prot
Match: AMP2A_ARATH (Methionine aminopeptidase 2A OS=Arabidopsis thaliana GN=MAP2A PE=2 SV=2)

HSP 1 Score: 370.548 bits (950), Expect = 4.354e-102
Identity = 173/196 (88.27%), Postives = 190/196 (96.94%), Query Frame = 3
Query:    3 STNTGIKEAGIDVRLCDIGAAIQEVMESYEVEINGKVFQVKSIRNLNGHSIGRYQIHAGKSVPIVKGGEQTKMEEGEFFAIETFASTGKGYVREDLECSHYMKNFDVGHIPLRLPRAKQLLATINKNFSTLAFCRRYLDRLGETKYLMALKNLCDTGIVQPYPPLCDIKGSYVSQFEHTILLRPTCKEVISRGDDY 590
            +T TGIKEAG+DVRLCD+GAA+QEVMESYEVEINGKV+QVKSIRNLNGHSIGRYQIHA KSVP V+GGEQTKMEEGE +AIETF STGKGYVREDLECSHYMKN+DVGH+PLRLPRAKQLLATINKNFSTLAFCRRYLDRLGETKYLMALKNLCD+GI++P PP+CD+KGSY+SQFEHTILLRPTCKE+IS+GDDY
Sbjct:  246 ATYTGIKEAGVDVRLCDVGAAVQEVMESYEVEINGKVYQVKSIRNLNGHSIGRYQIHAEKSVPNVRGGEQTKMEEGELYAIETFGSTGKGYVREDLECSHYMKNYDVGHVPLRLPRAKQLLATINKNFSTLAFCRRYLDRLGETKYLMALKNLCDSGIIEPCPPVCDVKGSYISQFEHTILLRPTCKEIISKGDDY 441          
BLAST of FC875433 vs. ExPASy Swiss-Prot
Match: AMPM2_HUMAN (Methionine aminopeptidase 2 OS=Homo sapiens GN=METAP2 PE=1 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 3.341e-94
Identity = 161/196 (82.14%), Postives = 179/196 (91.33%), Query Frame = 3
Query:    3 STNTGIKEAGIDVRLCDIGAAIQEVMESYEVEINGKVFQVKSIRNLNGHSIGRYQIHAGKSVPIVKGGEQTKMEEGEFFAIETFASTGKGYVREDLECSHYMKNFDVGHIPLRLPRAKQLLATINKNFSTLAFCRRYLDRLGETKYLMALKNLCDTGIVQPYPPLCDIKGSYVSQFEHTILLRPTCKEVISRGDDY 590
            +TNTGIK AGIDVRLCD+G AIQEVMESYEVEI+GK +QVK IRNLNGHSIG+Y+IHAGK+VPIVKGGE T+MEEGE +AIETF STGKG V +D+ECSHYMKNFDVGH+P+RLPR K LL  IN+NF TLAFCRR+LDRLGE+KYLMALKNLCD GIV PYPPLCDIKGSY +QFEHTILLRPTCKEV+SRGDDY
Sbjct:  283 ATNTGIKCAGIDVRLCDVGEAIQEVMESYEVEIDGKTYQVKPIRNLNGHSIGQYRIHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIRLPRTKHLLNVINENFGTLAFCRRWLDRLGESKYLMALKNLCDLGIVDPYPPLCDIKGSYTAQFEHTILLRPTCKEVVSRGDDY 478          
BLAST of FC875433 vs. ExPASy Swiss-Prot
Match: AMPM2_RAT (Methionine aminopeptidase 2 OS=Rattus norvegicus GN=Metap2 PE=2 SV=2)

HSP 1 Score: 343.199 bits (879), Expect = 7.443e-94
Identity = 161/196 (82.14%), Postives = 178/196 (90.82%), Query Frame = 3
Query:    3 STNTGIKEAGIDVRLCDIGAAIQEVMESYEVEINGKVFQVKSIRNLNGHSIGRYQIHAGKSVPIVKGGEQTKMEEGEFFAIETFASTGKGYVREDLECSHYMKNFDVGHIPLRLPRAKQLLATINKNFSTLAFCRRYLDRLGETKYLMALKNLCDTGIVQPYPPLCDIKGSYVSQFEHTILLRPTCKEVISRGDDY 590
            +TNTGIK AGIDVRLCD+G AIQEVMESYEVEI+GK +QVK IRNLNGHSIG Y+IHAGK+VPIVKGGE T+MEEGE +AIETF STGKG V +D+ECSHYMKNFDVGH+P+RLPR K LL  IN+NF TLAFCRR+LDRLGE+KYLMALKNLCD GIV PYPPLCDIKGSY +QFEHTILLRPTCKEV+SRGDDY
Sbjct:  283 ATNTGIKCAGIDVRLCDVGEAIQEVMESYEVEIDGKTYQVKPIRNLNGHSIGPYRIHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIRLPRTKHLLNVINENFGTLAFCRRWLDRLGESKYLMALKNLCDLGIVDPYPPLCDIKGSYTAQFEHTILLRPTCKEVVSRGDDY 478          
BLAST of FC875433 vs. ExPASy Swiss-Prot
Match: AMPM2_MOUSE (Methionine aminopeptidase 2 OS=Mus musculus GN=Metap2 PE=1 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 7.443e-94
Identity = 161/196 (82.14%), Postives = 178/196 (90.82%), Query Frame = 3
Query:    3 STNTGIKEAGIDVRLCDIGAAIQEVMESYEVEINGKVFQVKSIRNLNGHSIGRYQIHAGKSVPIVKGGEQTKMEEGEFFAIETFASTGKGYVREDLECSHYMKNFDVGHIPLRLPRAKQLLATINKNFSTLAFCRRYLDRLGETKYLMALKNLCDTGIVQPYPPLCDIKGSYVSQFEHTILLRPTCKEVISRGDDY 590
            +TNTGIK AGIDVRLCD+G AIQEVMESYEVEI+GK +QVK IRNLNGHSIG Y+IHAGK+VPIVKGGE T+MEEGE +AIETF STGKG V +D+ECSHYMKNFDVGH+P+RLPR K LL  IN+NF TLAFCRR+LDRLGE+KYLMALKNLCD GIV PYPPLCDIKGSY +QFEHTILLRPTCKEV+SRGDDY
Sbjct:  283 ATNTGIKCAGIDVRLCDVGEAIQEVMESYEVEIDGKTYQVKPIRNLNGHSIGPYRIHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIRLPRTKHLLNVINENFGTLAFCRRWLDRLGESKYLMALKNLCDLGIVDPYPPLCDIKGSYTAQFEHTILLRPTCKEVVSRGDDY 478          
BLAST of FC875433 vs. ExPASy Swiss-Prot
Match: AMPM2_BOVIN (Methionine aminopeptidase 2 OS=Bos taurus GN=METAP2 PE=2 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 7.443e-94
Identity = 161/196 (82.14%), Postives = 178/196 (90.82%), Query Frame = 3
Query:    3 STNTGIKEAGIDVRLCDIGAAIQEVMESYEVEINGKVFQVKSIRNLNGHSIGRYQIHAGKSVPIVKGGEQTKMEEGEFFAIETFASTGKGYVREDLECSHYMKNFDVGHIPLRLPRAKQLLATINKNFSTLAFCRRYLDRLGETKYLMALKNLCDTGIVQPYPPLCDIKGSYVSQFEHTILLRPTCKEVISRGDDY 590
            +TNTGIK AGIDVRLCD+G AIQEVMESYEVEI+GK +QVK IRNLNGHSIG Y+IHAGK+VPIVKGGE T+MEEGE +AIETF STGKG V +D+ECSHYMKNFDVGH+P+RLPR K LL  IN+NF TLAFCRR+LDRLGE+KYLMALKNLCD GIV PYPPLCDIKGSY +QFEHTILLRPTCKEV+SRGDDY
Sbjct:  282 ATNTGIKCAGIDVRLCDVGEAIQEVMESYEVEIDGKTYQVKPIRNLNGHSIGPYRIHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIRLPRTKHLLNVINENFGTLAFCRRWLDRLGESKYLMALKNLCDLGIVDPYPPLCDIKGSYTAQFEHTILLRPTCKEVVSRGDDY 477          
BLAST of FC875433 vs. ExPASy Swiss-Prot
Match: AMPM2_SCHPO (Methionine aminopeptidase 2 OS=Schizosaccharomyces pombe GN=fma2 PE=2 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 4.236e-81
Identity = 147/196 (75.00%), Postives = 163/196 (83.16%), Query Frame = 3
Query:    3 STNTGIKEAGIDVRLCDIGAAIQEVMESYEVEINGKVFQVKSIRNLNGHSIGRYQIHAGKSVPIVKGGEQTKMEEGEFFAIETFASTGKGYVREDLECSHYMKNFDVGHIPLRLPRAKQLLATINKNFSTLAFCRRYLDRLGETKYLMALKNLCDTGIVQPYPPLCDIKGSYVSQFEHTILLRPTCKEVISRGDDY 590
            +TN GI+EAGID RL +IG AIQEVMESYEVEINGK  QVKSIRNL GH++  Y IH GKSVPIVKGGE+ KMEEGE FAIETF STG+G V ED+ECSHY K  D GHIPLRLPRAK LL TI +NF TL FCRRYLDR+GE+KYL+AL NL   GIVQ YPPLCDI+GSY +QFEHTI+L PT KEV+SRGDDY
Sbjct:  231 ATNKGIEEAGIDARLNEIGEAIQEVMESYEVEINGKTHQVKSIRNLCGHNLDPYIIHGGKSVPIVKGGEEIKMEEGEIFAIETFGSTGRGVVHEDMECSHYAKIPDAGHIPLRLPRAKALLNTITQNFGTLPFCRRYLDRIGESKYLLALNNLVSAGIVQDYPPLCDIRGSYTAQFEHTIILHPTQKEVVSRGDDY 426          
BLAST of FC875433 vs. ExPASy Swiss-Prot
Match: AMPM2_DICDI (Methionine aminopeptidase 2 OS=Dictyostelium discoideum GN=metap2 PE=3 SV=3)

HSP 1 Score: 275.789 bits (704), Expect = 1.459e-73
Identity = 134/196 (68.37%), Postives = 160/196 (81.63%), Query Frame = 3
Query:    3 STNTGIKEAGIDVRLCDIGAAIQEVMESYEVEINGKVFQVKSIRNLNGHSIGRYQIHAGKSVPIVKGGEQTKMEEGEFFAIETFASTGKGYVREDLECSHYMKNFDVGHIPLRLPRAKQLLATINKNFSTLAFCRRYLDRLGETKYLMALKNLCDTGIVQPYPPLCDIKGSYVSQFEHTILLRPTCKEVISRGDDY 590
            +TNTGI  AGID RL +IGAAIQEVMES+E+E+NGK + ++SIRNLNGHSI  Y IH GK+VPIV+GGE TKMEEGEF+AIETF STG+  V EDLECSHYMK        +RLP+AKQLL  INKN+ TL FCRR+LDR GE K+++AL NLCD GI+Q + PL D KGSYV+Q+EHT+LL+PT KEV+SRGDDY
Sbjct:  243 ATNTGIYHAGIDARLGEIGAAIQEVMESHEIELNGKTYPIRSIRNLNGHSIRPYVIHGGKTVPIVRGGEMTKMEEGEFYAIETFGSTGRAQVIEDLECSHYMKT--DYQTTVRLPKAKQLLQYINKNYDTLCFCRRWLDRAGEDKHILALNNLCDLGIIQRHAPLVDSKGSYVAQYEHTLLLKPTAKEVLSRGDDY 436          
BLAST of FC875433 vs. ExPASy Swiss-Prot
Match: AMPM2_YEAST (Methionine aminopeptidase 2 OS=Saccharomyces cerevisiae GN=MAP2 PE=1 SV=3)

HSP 1 Score: 257.684 bits (657), Expect = 4.113e-68
Identity = 132/196 (67.35%), Postives = 149/196 (76.02%), Query Frame = 3
Query:    3 STNTGIKEAGIDVRLCDIGAAIQEVMESYEVEINGKVFQVKSIRNLNGHSIGRYQIHAGKSVPIVKGGEQTKMEEGEFFAIETFASTGKGYVREDLECSHYMKNFDVGHIPLRLPRAKQLLATINKNFSTLAFCRRYLDRLGETKYLMALKNLCDTGIVQPYPPLCDIKGSYVSQFEHTILLRPTCKEVISRGDDY 590
            +T TGIKEAGIDVRL DIG AIQEVMESYEVEING+ +QVK  RNL GHSI  Y+IH GKSVPIVK G+ TKMEEGE FAIETF STG+GYV    E SHY ++ +   +   L  AK LL TI++NF TL FCRRYLDRLG+ KYL AL NL   G+VQ YPPL DI GSY +QFEHTILL    KEV+S+GDDY
Sbjct:  226 ATYTGIKEAGIDVRLTDIGEAIQEVMESYEVEINGETYQVKPCRNLCGHSIAPYRIHGGKSVPIVKNGDTTKMEEGEHFAIETFGSTGRGYVTAGGEVSHYARSAEDHQVMPTLDSAKNLLKTIDRNFGTLPFCRRYLDRLGQEKYLFALNNLVRHGLVQDYPPLNDIPGSYTAQFEHTILLHAHKKEVVSKGDDY 421          
BLAST of FC875433 vs. ExPASy Swiss-Prot
Match: AMPM2_ENCIN (Methionine aminopeptidase 2 OS=Encephalitozoon intestinalis GN=MAP2 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 9.548e-41
Identity = 86/197 (43.65%), Postives = 122/197 (61.93%), Query Frame = 3
Query:    6 TNTGIKEAGIDVRLCDIGAAIQEVMESYEVEINGKVFQVKSIRNLNGHSIGRYQIHAGKSVPIVKGGEQTKMEEGEFFAIETFASTGKGYVREDLECSHYMKNFDVGHIPLRLPRAKQLLATINKNFSTLAFCRRYLD--RLGETKYLMALKNLCDTGIVQPYPPLCDIKGSYVSQFEHTILLRPTCKEVISRGDDY 590
            T TGI+  GID R+CDIG  I EV+ SYEVEI GK + ++ + +L+GHSI +++IH G S+P V   + T+++   F+A+ETFA+TGKG++ +   CSH+M N             K +   +  +F TL F  R+LD   L E   L ++  L   G+  PYPPL DI GS V+QFEHT+ L    KE+++RGDDY
Sbjct:  163 TETGIRSLGIDARVCDIGRDINEVITSYEVEIEGKTWPIRPVSDLHGHSISQFKIHGGISIPAVNNRDTTRIKGDTFYAVETFATTGKGFINDRSPCSHFMLNVHKSRKLFNKDLIK-VYEFVKSSFGTLPFSPRHLDHYNLVEGGSLKSVNLLTMMGLFTPYPPLNDIDGSKVAQFEHTVYLSENGKEILTRGDDY 358          
The following BLAST results are available for this feature:
BLAST of FC875433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
AMP2B_ARATH2.913e-10693.88Methionine aminopeptidase 2B OS=Arabidopsis thalia... [more]
AMP2A_ARATH4.354e-10288.27Methionine aminopeptidase 2A OS=Arabidopsis thalia... [more]
AMPM2_HUMAN3.341e-9482.14Methionine aminopeptidase 2 OS=Homo sapiens GN=MET... [more]
AMPM2_RAT7.443e-9482.14Methionine aminopeptidase 2 OS=Rattus norvegicus G... [more]
AMPM2_MOUSE7.443e-9482.14Methionine aminopeptidase 2 OS=Mus musculus GN=Met... [more]
AMPM2_BOVIN7.443e-9482.14Methionine aminopeptidase 2 OS=Bos taurus GN=METAP... [more]
AMPM2_SCHPO4.236e-8175.00Methionine aminopeptidase 2 OS=Schizosaccharomyces... [more]
AMPM2_DICDI1.459e-7368.37Methionine aminopeptidase 2 OS=Dictyostelium disco... [more]
AMPM2_YEAST4.113e-6867.35Methionine aminopeptidase 2 OS=Saccharomyces cerev... [more]
AMPM2_ENCIN9.548e-4143.65Methionine aminopeptidase 2 OS=Encephalitozoon int... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31403H03EF CTVClemen1 Citrus clementina cDNA clone C31403H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875433 ID=FC875433; Name=FC875433; organism=Citrus clementina; type=EST; length=679bp
GAAGCACCAATACGGGTATCAAGGAAGCAGGGATCGATGTCCGACTTTGT
GATATTGGTGCCGCAATCCAAGAAGTCATGGAGTCATACGAGGTTGAAAT
AAATGGAAAGGTGTTTCAAGTTAAAAGTATCCGGAACTTGAATGGACACA
GCATTGGGCGTTATCAGATCCATGCTGGAAAGTCTGTTCCAATTGTGAAA
GGAGGGGAGCAGACAAAGATGGAAGAGGGTGAATTTTTCGCAATTGAAAC
CTTTGCGTCAACAGGGAAAGGATATGTCAGAGAAGATCTTGAGTGCAGCC
ATTACATGAAAAATTTTGATGTTGGCCACATCCCACTGAGGCTTCCCAGA
GCCAAGCAACTATTAGCAACAATCAACAAGAATTTCTCTACATTGGCATT
CTGTAGACGGTATTTAGATCGCCTTGGAGAGACTAAATATCTGATGGCCC
TGAAGAATTTGTGTGATACTGGCATTGTTCAGCCATATCCTCCTCTCTGC
GACATTAAAGGCAGTTATGTGTCTCAGTTCGAGCATACCATCTTACTACG
GCCGACCTGCAAAGAGGTGATATCCAGAGGAGATGACTACTGAAGTGGAT
GATGTTAAAATTTTGTCAGNTACTTATCTGCACGATTGCTGTACACCTTT
TACCGTTTGGACTGTAAATTTTCTGTTGA
back to top