FC875458

Overview
NameFC875458
Unique NameFC875458
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10323 contig Ccv1_Contig10323:40..745. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPK3_ARATH (Calcium-dependent protein kinase 3 OS=Arabidopsis thaliana GN=CPK3 PE=1 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 5.237e-77
Identity = 137/164 (83.54%), Postives = 152/164 (92.68%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            LG+PME+VR TY FGRELGRGQFG+TYLVTHK TKQQ ACKSI +R+L+++DD+EDVRREVQIMHHL+GHRNIV+LKGAYEDRHSVNLIM+LC GGELFDRII+KG YSERAAA+LCRQMV VVH CHSMGVMHRDLKPENFLF S  E+SPLKATDFGLSVFF
Sbjct:   67 LGRPMEEVRRTYEFGRELGRGQFGVTYLVTHKETKQQVACKSIPTRRLVHKDDIEDVRREVQIMHHLSGHRNIVDLKGAYEDRHSVNLIMELCEGGELFDRIISKGLYSERAAADLCRQMVMVVHSCHSMGVMHRDLKPENFLFLSKDENSPLKATDFGLSVFF 230          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPKY_ARATH (Calcium-dependent protein kinase 34 OS=Arabidopsis thaliana GN=CPK34 PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.804e-69
Identity = 122/164 (74.39%), Postives = 146/164 (89.02%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            LG+PMEDV+++Y  G+ELGRGQFG+T+L T K T  QFACK+I+ RKL+N++D+EDVRREVQIMHHLTG  NIVELKGAYED+HSV+L+M+LCAGGELFDRIIAKGHYSERAAA+L R +V ++H CHSMGV+HRDLKPENFL  S  E+SPLKATDFGLSVF+
Sbjct:   57 LGRPMEDVKSSYTLGKELGRGQFGVTHLCTQKATGLQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAKGHYSERAAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLSKDENSPLKATDFGLSVFY 220          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPKH_ARATH (Calcium-dependent protein kinase 17 OS=Arabidopsis thaliana GN=CPK17 PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 5.249e-69
Identity = 122/164 (74.39%), Postives = 145/164 (88.41%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            LG+PMEDV+ +Y  G+ELGRGQFG+T+L T K T  QFACK+I+ RKL+N++D+EDVRREVQIMHHLTG  NIVELKGAYED+HSV+L+M+LCAGGELFDRIIAKGHYSERAAA+L R +V +VH CHSMGV+HRDLKPENFL  +  E+SPLKATDFGLSVF+
Sbjct:   62 LGRPMEDVKASYSLGKELGRGQFGVTHLCTQKATGHQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAKGHYSERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFY 225          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPK2_ORYSJ (Calcium-dependent protein kinase isoform 2 OS=Oryza sativa subsp. japonica GN=CPK2 PE=2 SV=2)

HSP 1 Score: 237.269 bits (604), Expect = 6.214e-62
Identity = 110/163 (67.48%), Postives = 138/163 (84.66%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 701
            LGKP +DVR+ Y  G+ELGRGQFG+TYL T   + +Q+ACKSIS RKL+++ D ED+RRE+QIM HL+G +NIVE +GAYED+ +V+++M+LCAGGELFDRIIAKGHYSERAAA +CR +V VV+ CH MGVMHRDLKPENFL ++  E++ LKATDFGLSVF
Sbjct:   74 LGKPYDDVRSVYSLGKELGRGQFGVTYLCTEIASGKQYACKSISKRKLVSKADKEDIRREIQIMQHLSGQQNIVEFRGAYEDKSNVHVVMELCAGGELFDRIIAKGHYSERAAATICRAVVNVVNICHFMGVMHRDLKPENFLLATKEENAMLKATDFGLSVF 236          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPKX_ARATH (Calcium-dependent protein kinase 33 OS=Arabidopsis thaliana GN=CPK33 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.384e-61
Identity = 113/163 (69.33%), Postives = 134/163 (82.21%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 701
            L KP EDV+  Y   +ELGRGQFG+TYL T K T ++FACKSIS +KL+ + D ED+RRE+QIM HL+G  NIVE KGAYED  +VNL+M+LCAGGELFDRI+AKGHYSERAAA++CRQ+V VV+ CH MGVMHRDLKPENFL SS  E + +KATDFGLSVF
Sbjct:   62 LEKPYEDVKLFYTLSKELGRGQFGVTYLCTEKSTGKRFACKSISKKKLVTKGDKEDMRREIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFDRILAKGHYSERAAASVCRQIVNVVNICHFMGVMHRDLKPENFLLSSKDEKALIKATDFGLSVF 224          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPK_DAUCA (Calcium-dependent protein kinase OS=Daucus carota PE=2 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 2.361e-61
Identity = 110/163 (67.48%), Postives = 132/163 (80.98%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 701
            LGKP ED+R  Y  G+ELGRGQFG  Y  T   + Q +ACKSI  RKL++++D ED++RE+QI+ HL+G  NIVE KG +EDR SV+L+M+LCAGGELFDRIIA+GHYSERAAA +CRQ+V VVH CH MGVMHRDLKPENFL SS  +D+ LKATDFGLSVF
Sbjct:   70 LGKPFEDIRGKYTLGKELGRGQFGCVYQCTENSSGQLYACKSILKRKLVSKNDKEDIKREIQILQHLSGQPNIVEFKGVFEDRQSVHLVMELCAGGELFDRIIAQGHYSERAAATICRQIVNVVHVCHFMGVMHRDLKPENFLLSSKDKDAMLKATDFGLSVF 232          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPK2_MAIZE (Calcium-dependent protein kinase 2 OS=Zea mays GN=CPK2 PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.028e-61
Identity = 110/163 (67.48%), Postives = 137/163 (84.05%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 701
            LGK  EDVR+ Y FG+ELGRGQFG+TYL T   + +Q+ACKSIS RKL+++ D ED+RRE+QIM HL+G  NIVE +GAYED+ +V+++M+LCAGGELFDRIIAKGHY+ERAAA +CR +V VV+ CH MGVMHRDLKPENFL ++  E++ LKATDFGLSVF
Sbjct:   54 LGKQYEDVRSVYSFGKELGRGQFGVTYLCTEIASGRQYACKSISKRKLVSKADREDIRREIQIMQHLSGQPNIVEFRGAYEDKSNVHVVMELCAGGELFDRIIAKGHYTERAAATICRAVVNVVNICHFMGVMHRDLKPENFLLATMEENAMLKATDFGLSVF 216          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPKL_ARATH (Calcium-dependent protein kinase 21 OS=Arabidopsis thaliana GN=CPK21 PE=1 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.887e-59
Identity = 110/163 (67.48%), Postives = 131/163 (80.37%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 701
            LGKP ED+R  Y  G+ELGRGQFGITY+     T   +ACKSI  RKLI++ D EDV+RE+QIM +L+G  NIVE+KGAYEDR S++L+M+LCAGGELFDRIIA+GHYSERAAA + R +V VV  CH MGV+HRDLKPENFL SS  E++ LKATDFGLSVF
Sbjct:   69 LGKPFEDIRKFYSLGKELGRGQFGITYMCKEIGTGNTYACKSILKRKLISKQDKEDVKREIQIMQYLSGQPNIVEIKGAYEDRQSIHLVMELCAGGELFDRIIAQGHYSERAAAGIIRSIVNVVQICHFMGVVHRDLKPENFLLSSKEENAMLKATDFGLSVF 231          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPK9_ARATH (Calcium-dependent protein kinase 9 OS=Arabidopsis thaliana GN=CPK9 PE=1 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.399e-59
Identity = 108/163 (66.26%), Postives = 131/163 (80.37%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 701
            L    EDV+  Y  G+ELGRGQFG+TYL T   T +++ACKSIS +KL+ + D +D+RRE+QIM HL+G  NIVE KGAYED  +VNL+M+LCAGGELFDRIIAKGHY+ERAAA++CRQ+V VV  CH MGV+HRDLKPENFL SS  E + +KATDFGLSVF
Sbjct:   80 LENAFEDVKLFYTLGKELGRGQFGVTYLCTENSTGKKYACKSISKKKLVTKADKDDMRREIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFDRIIAKGHYTERAAASVCRQIVNVVKICHFMGVLHRDLKPENFLLSSKDEKALIKATDFGLSVF 242          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPKT_ARATH (Calcium-dependent protein kinase 29 OS=Arabidopsis thaliana GN=CPK29 PE=2 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 4.168e-58
Identity = 108/163 (66.26%), Postives = 130/163 (79.75%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 701
            L +PM D+   Y   +ELGRGQFGITY  T K   +++ACKSIS RKLI R D+EDVRREV I+ HLTG  NIVE +GAYED+ +++L+M+LC+GGELFDRII KG YSE+ AAN+ RQ+V VVH CH MGV+HRDLKPENFL  S+ EDSP+KATDFGLSVF
Sbjct:   74 LNRPMIDLSALYDLHKELGRGQFGITYKCTDKSNGREYACKSISKRKLIRRKDIEDVRREVMILQHLTGQPNIVEFRGAYEDKDNLHLVMELCSGGELFDRIIKKGSYSEKEAANIFRQIVNVVHVCHFMGVVHRDLKPENFLLVSNEEDSPIKATDFGLSVF 236          
The following BLAST results are available for this feature:
BLAST of FC875458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDPK3_ARATH5.237e-7783.54Calcium-dependent protein kinase 3 OS=Arabidopsis ... [more]
CDPKY_ARATH1.804e-6974.39Calcium-dependent protein kinase 34 OS=Arabidopsis... [more]
CDPKH_ARATH5.249e-6974.39Calcium-dependent protein kinase 17 OS=Arabidopsis... [more]
CDPK2_ORYSJ6.214e-6267.48Calcium-dependent protein kinase isoform 2 OS=Oryz... [more]
CDPKX_ARATH1.384e-6169.33Calcium-dependent protein kinase 33 OS=Arabidopsis... [more]
CDPK_DAUCA2.361e-6167.48Calcium-dependent protein kinase OS=Daucus carota ... [more]
CDPK2_MAIZE4.028e-6167.48Calcium-dependent protein kinase 2 OS=Zea mays GN=... [more]
CDPKL_ARATH2.887e-5967.48Calcium-dependent protein kinase 21 OS=Arabidopsis... [more]
CDPK9_ARATH8.399e-5966.26Calcium-dependent protein kinase 9 OS=Arabidopsis ... [more]
CDPKT_ARATH4.168e-5866.26Calcium-dependent protein kinase 29 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionC31404B09EF CTVClemen1 Citrus clementina cDNA clone C31404B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875458 ID=FC875458; Name=FC875458; organism=Citrus clementina; type=EST; length=706bp
GCATTTGTCTTCCCGGTCTCTCTTGACTCGTGTTGACCAAAATGGGCAAC
TGTAACGGCCTACCCTCGTCTCAAACTCAACTCCACTCAACCACTGCCGA
TCCCGACACTGGGCCCGGCCACCACCCCAACGGCCTCAAAATAGATCCTC
CGGGTCCTCCTCGTCCTTCTTCCTCTGCCACGTCAGCCACCTCGTCATCC
GTTGGCCGTGTCCTCGGCAAACCCATGGAGGACGTCCGCAACACCTACAT
CTTCGGCCGCGAGCTCGGCCGCGGCCAGTTCGGCATCACCTACTTAGTAA
CTCACAAATACACCAAACAACAATTCGCCTGCAAATCCATCTCCTCTCGC
AAGCTCATAAACCGCGACGACGTCGAAGACGTCCGCCGTGAGGTCCAGAT
CATGCACCACCTAACCGGGCACAGGAATATTGTGGAGCTGAAGGGGGCGT
ATGAGGACAGGCACTCGGTGAATTTGATTATGGATTTGTGTGCGGGAGGG
GAGTTGTTTGATCGGATCATAGCCAAGGGGCATTATTCGGAGAGAGCCGC
TGCGAATTTGTGTCGACAGATGGTGACTGTGGTGCATTACTGTCATTCCA
TGGGTGTGATGCACAGAGACTTGAAGCCTGAGAATTTCTTATTCTCGAGT
TCCGCTGAAGATTCTCCTTTGAAGGCTACTGATTTCGGACTCTCTGTGTT
TTTCAG
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