FC875464
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875464 vs. ExPASy Swiss-Prot
Match: PROSC_HUMAN (Proline synthetase co-transcribed bacterial homolog protein OS=Homo sapiens GN=PROSC PE=1 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.583e-39 Identity = 95/199 (47.74%), Postives = 128/199 (64.32%), Query Frame = 1 Query: 118 LRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQ-----LPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR-KPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGM--PDYTSTPE-KLQTXSKCRSEVCKALGI 681 LR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R FGENYVQE++EKA+ L +++WHFIG+LQ V L+A VPNL M+E+VD+ K+A ++N + G + LKV+VQ+NTSGEESK G+ PS + +V+H++ CPNLEF GLMTIG D + P Q R E+CK L I Sbjct: 17 LRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSLCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADKVNSSWQRKGSPERLKVMVQINTSGEESKHGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLREELCKKLNI 214
BLAST of FC875464 vs. ExPASy Swiss-Prot
Match: PROSC_PONAB (Proline synthetase co-transcribed bacterial homolog protein OS=Pongo abelii GN=PROSC PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.754e-39 Identity = 94/199 (47.24%), Postives = 128/199 (64.32%), Query Frame = 1 Query: 118 LRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQ-----LPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR-KPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGM--PDYTSTPE-KLQTXSKCRSEVCKALGI 681 LR+V +RV QA R P + R+VAVSKTKP ++ + Y G R FGENYVQE++EKA+ L +++WHFIG+LQ V L+A VPNL ++E+VD+ K+AG++N + G + LKV+VQ+NTSGEESK G+ PS + +V+H++ CPNLEF GLMTIG D + P Q R E+CK L I Sbjct: 17 LRAVNERVQQAVALRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSLGPEIKWHFIGHLQKQNVNKLMA-VPNLFVLETVDSVKLAGKVNSSWQKKGSPERLKVMVQINTSGEESKHGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLREELCKKLNI 214
BLAST of FC875464 vs. ExPASy Swiss-Prot
Match: PROSC_MOUSE (Proline synthetase co-transcribed bacterial homolog protein OS=Mus musculus GN=Prosc PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.674e-38 Identity = 92/199 (46.23%), Postives = 130/199 (65.33%), Query Frame = 1 Query: 118 LRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG-RKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGM--PDYTSTPE-KLQTXSKCRSEVCKALGI 681 LR+V +RV Q+ R R P + R+VAVSKTKP ++ + Y G R FGENYVQE++EKA+ +++WHFIG+LQ V L+A VPNL+M+E+VD+ K+A ++N + G +PLKV+VQ+NTSGE+SK G+ PS + +V+H+ +CP+LEF GLMTIG D + P Q R E+C+ LGI Sbjct: 17 LRAVNERVQQSVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKLADKVNSSWQKKGPTEPLKVMVQINTSGEDSKHGLLPSETIAVVEHIKASCPSLEFVGLMTIGSFGHDLSQGPNPDFQRLLTLRRELCEKLGI 214
BLAST of FC875464 vs. ExPASy Swiss-Prot
Match: PROSC_BOVIN (Proline synthetase co-transcribed bacterial homolog protein OS=Bos taurus GN=PROSC PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.417e-37 Identity = 91/198 (45.96%), Postives = 126/198 (63.64%), Query Frame = 1 Query: 118 LRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR-KPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGM--PDYTSTPE-KLQTXSKCRSEVCKALG 678 LR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R FGENYVQE++EKA+ +++WHFIG+LQ V L+A VPNL+M+E+VD+ K+A ++N + G + LKV+VQ+NTSGE SK G+ P+ LV+H++ CP+LEF GLMTIG D + P Q R E+C+ LG Sbjct: 17 LRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYSHGQRTFGENYVQELLEKASNPQILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKLADKVNSAWQKKGSPERLKVMVQINTSGEASKHGLPPAEMAALVEHINAKCPSLEFVGLMTIGSFGHDLSQGPNPDFQVLLSLREELCRKLG 213
BLAST of FC875464 vs. ExPASy Swiss-Prot
Match: PROSC_DICDI (Proline synthetase co-transcribed bacterial homolog protein OS=Dictyostelium discoideum GN=prosc PE=3 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 9.186e-37 Identity = 90/205 (43.90%), Postives = 124/205 (60.49%), Query Frame = 1 Query: 118 LRSVIQRVHQAAERSSRPPDR--IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRL----------NRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHV--SQNCPN-LEFCGLMTIGMPDYTSTPEKLQTXSKCRSEVCKALGI 681 L S + + E S DR +++VAVSKTKP +IR +Y+ GHR FGENY+QE+V K+ +L + +++WHFIG++QSNK K +L V NL +VE+V+N+KI +L N K L +++QVNTSGEESKSG +P CL+LVKH NC N L F GLMTIG P+ T + C++ + K L I Sbjct: 10 LISSYKNIKDRVEIISNKFDRHNVKLVAVSKTKPTEMIRILYDKGHRHFGENYIQELVSKSEELSELNEIKWHFIGSIQSNKSK-ILTSVKNLYVVETVENKKILDKLAKSLLNNEENNNNNNNNNNKKLNIMIQVNTSGEESKSGCKPEECLDLVKHCLEDNNCKNSLNFLGLMTIGNPNATPDQPDFKCLVDCKNNISKQLNI 213
BLAST of FC875464 vs. ExPASy Swiss-Prot
Match: Y112_PASMU (UPF0001 protein PM0112 OS=Pasteurella multocida GN=PM0112 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.767e-31 Identity = 81/178 (45.51%), Postives = 110/178 (61.80%), Query Frame = 1 Query: 118 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA---AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMP-DYTSTPEKLQT 639 L + Q + A +++ RP ++++AVSKTKPV I Q Y+AG FGENYVQE VEK AQ LEWHFIG LQSNK K + + ++++D +KIA RLN +KPL VL+Q+N S E+SKSG++P+ L+L K + QN P+L GLM I P D +T E+ T Sbjct: 7 LAQIQQNIQHAVQQAKRPESAVKLLAVSKTKPVEDIYQAYQAGQTAFGENYVQEGVEKIQYFAQKNIPLEWHFIGPLQSNKTKLV---AEHFDWMQTLDRKKIADRLNEQ-RPHYKKPLNVLIQINISDEDSKSGIQPNEMLDLAKQI-QNLPHLCLRGLMAIPAPTDDLATQEQAFT 179
BLAST of FC875464 vs. ExPASy Swiss-Prot
Match: YKC9_SCHPO (UPF0001 protein C644.09 OS=Schizosaccharomyces pombe GN=SPAC644.09 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.738e-30 Identity = 78/170 (45.88%), Postives = 103/170 (60.59%), Query Frame = 1 Query: 181 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPDYTSTPE---KLQTXSKCRSEVCKALGI 681 + +VAVSK PV + + Y AG R FGENY+QE ++K +PDD++WHFIG+LQS+K K +A V NL +E++D EK A +N E + + PL V +QVNTSGEE+K GV PS LEL K V Q+ L GLMTIG + + Q S R + LGI Sbjct: 24 VLLVAVSKFHPVETLMEAYNAGQRHFGENYMQEFLKKVELMPDDVQWHFIGSLQSSKCKK-IASVKNLYSIETIDTEKKARLVNSAREAL-QLPLNVYIQVNTSGEENKGGVTPSKVLELCKQV-QDMKYLRLKGLMTIGSISNSQLSDHNPDFQVLSDLRESLQNELGI 190
BLAST of FC875464 vs. ExPASy Swiss-Prot
Match: Y090_HAEIN (UPF0001 protein HI0090 OS=Haemophilus influenzae GN=HI0090 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.423e-29 Identity = 73/166 (43.98%), Postives = 101/166 (60.84%), Query Frame = 1 Query: 118 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMP 606 L + Q++ A + +R + ++++AVSKTKP+S I Y+AG FGENYVQE VEK +LEWHFIG LQSNK + + + ++++D KIA RLN T + PL VL+Q+N S EESKSG++P L L KH+ +N P+L GLM I P Sbjct: 7 LNLIQQKIETACKEENRNQNTVKLLAVSKTKPISAILSAYQAGQTAFGENYVQEGVEKIQYFESQGINLEWHFIGPLQSNKTRLV---AEHFDWMQTLDRAKIADRLNEQRPT-NKAPLNVLIQINISDEESKSGIQPEEMLTLAKHI-ENLPHLCLRGLMAIPAP 167
BLAST of FC875464 vs. ExPASy Swiss-Prot
Match: Y394_PSEAE (UPF0001 protein PA0394 OS=Pseudomonas aeruginosa GN=PA0394 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.968e-28 Identity = 74/164 (45.12%), Postives = 96/164 (58.54%), Query Frame = 1 Query: 118 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMP 606 + V R+ +AA+ + R P + ++AVSKTKP + +R+ + AG R FGENY+QE + K A+L D L WHFIG +QSNK +P+ + V SVD KIA RL+ G PL V +QVN SGE SKSG P L + V Q PNL GLM I P Sbjct: 8 IAKVAARIREAAQAAGRDPATVGLLAVSKTKPAAAVREAHAAGLRDFGENYLQEALGKQAELADLPLNWHFIGPIQSNKTRPI---AEHFQWVHSVDRLKIAQRLSEQ-RPAGLPPLNVCLQVNVSGEASKSGCAPEDLPALAEAVKQ-LPNLRLRGLMAIPEP 166
BLAST of FC875464 vs. ExPASy Swiss-Prot
Match: YPI1_VIBAL (UPF0001 protein in pilT-proC intergenic region OS=Vibrio alginolyticus PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.268e-27 Identity = 76/180 (42.22%), Postives = 106/180 (58.89%), Query Frame = 1 Query: 118 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----AAQLPDD-LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTI--GMPDYTSTPEKLQ 636 + + ++ ++ R P+ ++++AVSKTKPV I + Y+AG FGENYVQE V K A PD+ +EWHFIG +QSNK + + + V ++D KIA RLN KPL+VL+QVNTSGE SKSGV + EL + +S+ PNL GLM+I + DY S + Q Sbjct: 8 IEHITSQIRYDEQKCGRTPESVQLLAVSKTKPVEAILEAYQAGQTAFGENYVQEGVSKVQHFAEHYPDNRIEWHFIGPIQSNKSRLV---AEHFDWVHTIDRTKIAQRLNDQ-RPSELKPLQVLIQVNTSGEASKSGVTEAEVFELAELISR-LPNLTLRGLMSIPANVSDYESQLHEFQ 182 The following BLAST results are available for this feature:
BLAST of FC875464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875464 ID=FC875464; Name=FC875464; organism=Citrus clementina; type=EST; length=709bpback to top |