FC875467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875467 vs. ExPASy Swiss-Prot
Match: COL5_ARATH (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2) HSP 1 Score: 214.542 bits (545), Expect = 5.020e-55 Identity = 116/211 (54.98%), Postives = 141/211 (66.82%), Query Frame = 1 Query: 58 MGIELHSVKVISGGWSVAAKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIHNCMNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPFFDSADSIV----KSSAFNFLVPSDQNGGSEFTGASEHDGVDSASWLIPN--SKPGIENAG--EMKSGDMFFIDPFIDLNDFDYPNSFQNH-HSAGMDSVVPVQT 663 MG L S+K ISGGW AA+ CD CK+ AAVFCRVDSAFLC+ CD RIH+ +H RVW+CEVCEQAPAAVTCKADAAALCV+CD DIHSANPLA RHER+P+E FFDSA++ V SS F L S + ++ G+ WL+PN ++P G MK F F L DF++PNSF +H ++AG DS+VPVQT Sbjct: 1 MGFGLESIKSISGGWGAAARSCDACKSVTAAVFCRVDSAFLCIACDTRIHS-FTRHERVWVCEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERVPVETFFDSAETAVAKISASSTFGILGSSTTVDLTAVPVMADDLGL--CPWLLPNDFNEPAKIEIGTENMKGSSDFMFSDFDRLIDFEFPNSFNHHQNNAGGDSLVPVQT 208
BLAST of FC875467 vs. ExPASy Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2) HSP 1 Score: 183.341 bits (464), Expect = 1.239e-45 Identity = 105/217 (48.39%), Postives = 139/217 (64.06%), Query Frame = 1 Query: 106 VAAKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIH---NCMNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPFFD--SADSIVKSSAFNFLVP---SDQNGGSEFTGASEHDGVDSASW-LIPNSK------------------PGIENAGEMKSGDMFFI---DPFIDLN--DFDYPNSFQNHHSAGMDSVVPVQ 660 +A+K CD+CK+A AA++CR D+AFLCL+CD ++H ++HARVWMCEVCEQAPA VTCKADAAALCVTCD DIHSANPLARRHER+P+ PF+D S+D VK +A NFL SD +G G+ E + ++ASW L+PN K PG ++ EM +G + DP++DL+ + D +S+G D VVPV+ Sbjct: 1 MASKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSVKHTAVNFLDDCYFSDIDG----NGSREEEEEEAASWLLLPNPKTTTTATAGIVAVTSAEEVPG--DSPEMNTGQQYLFSDPDPYLDLDYGNVDPKVESLEQNSSGTDGVVPVE 211
BLAST of FC875467 vs. ExPASy Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.861e-39 Identity = 92/190 (48.42%), Postives = 120/190 (63.16%), Query Frame = 1 Query: 109 AAKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIHNC---MNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPFFDSADSIVK-SSAFNFLVPSDQNGGSEFTGASEHDGVDSASWLIPNSKPGIENAGEMKSGDMFFIDPFIDLNDFDYP--NSFQNHHSAGMDSVVPVQ 660 +++ CD+CK+ AA +FCR D+AFLC +CD +IH ++H RVW+CEVCEQAPA VTCKADAAALCVTCD DIHSANPL+RRHER+PI PF+D+ SS+ NF+ D++GG +ASWL+ +K GIE ++F +D DYP +S+G D VVPVQ Sbjct: 4 SSRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPAKSASSSVNFV---DEDGGDV-----------TASWLL--AKEGIEIT------NLF--------SDLDYPKIEVTSEENSSGNDGVVPVQ 163
BLAST of FC875467 vs. ExPASy Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.843e-35 Identity = 83/201 (41.29%), Postives = 121/201 (60.20%), Query Frame = 1 Query: 91 SGGWSVAAKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIH---NCMNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPFFDSADSIVKSSAFNFLVPSDQNGGSEFTGASEHDGVDSASWLIPNSKPGIENAGEMKSGDMFFIDPFIDLNDF--DYPNSFQNH------HSAGMDSVVPVQ 660 SG W A+ CDTC++AA V+C DSA+LC CD R+H ++H RV +C+ CE APAA CKADAA+LC CD +IHSANPLARRH+R+PI P + +++ + + PS+ + ++ D + ASWL+PN PG +N G +G +F ++ ++DL D+ N F+++ S G D VVP+Q Sbjct: 9 SGTW---ARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILP--------LSANSCSSMAPSETDAD------NDEDDREVASWLLPN--PG-KNIGNQNNGFLFGVE-YLDLVDYSSSMDNQFEDNQYTHYQRSFGGDGVVPLQ 188
BLAST of FC875467 vs. ExPASy Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.885e-34 Identity = 82/200 (41.00%), Postives = 113/200 (56.50%), Query Frame = 1 Query: 112 AKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIH---NCMNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPFFD-SADSIVKSSAFNFLVPSDQNGGSEFTGASEHDGVDSASWLIPNSKPGIENAGEMKSGDMFFIDPFIDLNDF--------DYPNSFQ-----NHHSAGMDSVVPVQ 660 A+ CDTC++AA V+CR DSA+LC +CD ++H ++H RV +C+ CE+APAA CKADAA+LC TCD++IHSANPLARRH+R+PI P + S S + + V +N + D ++ASWL+PNS N G D F++L D+ D N +Q S G D VVP+Q Sbjct: 9 AQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHSCETTVTDPENRLVLGQEEEDEDEAEAASWLLPNSGKNSGNNNGFSIG-----DEFLNLVDYSSSDKQFTDQSNQYQLDCNVPQRSYGEDGVVPLQ 203
BLAST of FC875467 vs. ExPASy Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 9.212e-33 Identity = 80/217 (36.87%), Postives = 117/217 (53.92%), Query Frame = 1 Query: 88 ISGGWSVAAKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIHNC---MNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPF----FDSADSIVKSSAFNFLVPS-----DQNGGSEFTGASEHDGVDSASWLIPNSKPGIENAGEMKSGDMFFIDPFIDLNDFD------YPNSFQNHH--------SAGMDSVVPVQ 660 I G + A+PCDTC++ A V+C DSA+LC++CD ++H+ ++H RV +CE CE+APAA C+AD A+LC CD+++HSANPLARRH+R+PI P F S + S P DQ G E + D + ASWL PNS N ++ + F D +++L D++ + + H S G D VVP++ Sbjct: 9 IGSGENNRARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTTHHQSEKTMTDPEKRLVVDQEEGEE----GDKDAKEVASWLFPNSDKNNNN----QNNGLLFSDEYLNLVDYNSSMDYKFTGEYSQHQQNCSVPQTSYGGDRVVPLK 217
BLAST of FC875467 vs. ExPASy Swiss-Prot
Match: COL15_ARATH (Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana GN=COL15 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.787e-13 Identity = 35/90 (38.89%), Postives = 47/90 (52.22%), Query Frame = 1 Query: 118 PCDTCKAAAAAVFCRVDSAFLCLNCDLRIHNC---MNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPF 378 PCD C A +FCR D+A LCL CD ++H KH R +C+ C P +V C D LC CD D+H + ++ H R +E F Sbjct: 8 PCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEGF 97
BLAST of FC875467 vs. ExPASy Swiss-Prot
Match: COL14_ARATH (Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana GN=COL14 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.753e-13 Identity = 34/89 (38.20%), Postives = 47/89 (52.81%), Query Frame = 1 Query: 121 CDTCKAAAAAVFCRVDSAFLCLNCDLRIHNC---MNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPF 378 C+ C A +FCR D+A LCL CD +H+ KH R +C+ C + P +V C D LC CD D+H + + HER +E F Sbjct: 12 CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEGF 100
BLAST of FC875467 vs. ExPASy Swiss-Prot
Match: COL13_ARATH (Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana GN=COL13 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.806e-12 Identity = 33/89 (37.08%), Postives = 52/89 (58.43%), Query Frame = 1 Query: 121 CDTCKAAAAAVFCRVDSAFLCLNCDLRIH---NCMNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPF 378 CD C ++ A V+C+ DSA LCL CD ++H KH R +C+ C ++P+++ C+ + + LC CD H+A+ + H R P E F Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCETERSVLCQNCDWQHHTAS--SSLHSRRPFEGF 99
BLAST of FC875467 vs. ExPASy Swiss-Prot
Match: STHX_ARATH (Probable salt tolerance-like protein At1g75540 OS=Arabidopsis thaliana GN=At1g75540 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.964e-12 Identity = 41/132 (31.06%), Postives = 59/132 (44.70%), Query Frame = 1 Query: 121 CDTCKAAAAAVFCRVDSAFLCLNCDLRIHNC---MNKHARVWM------------CEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPFFDSADSIVKSSAFNFLVPSDQNGGSEFTGAS 471 CD C A+VFC D A LC CD ++H+ +KH R + C++C+ A + C+ D A LC CD+ IH+AN ++H+R + SA S V S N G+S Sbjct: 5 CDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLCDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKSSSSSSSNQDFSVPGSS 136 The following BLAST results are available for this feature:
BLAST of FC875467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875467 ID=FC875467; Name=FC875467; organism=Citrus clementina; type=EST; length=771bpback to top |