FC875471

Overview
NameFC875471
Unique NameFC875471
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length380
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875471 vs. ExPASy Swiss-Prot
Match: ANXD2_ARATH (Annexin D2 OS=Arabidopsis thaliana GN=ANN2 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.349e-20
Identity = 45/58 (77.59%), Postives = 52/58 (89.66%), Query Frame = 2
Query:    2 TDEWGLTRVVTTRAEVDMQRIMEEYHRRNTVTLEKAIAGDTSGDYERMLLALIGHGDA 175
            TDEWGLTRVVTTR EVDM+RI EEY RRN++ L++AIA DTSGDYE ML+AL+GHGDA
Sbjct:  260 TDEWGLTRVVTTRTEVDMERIKEEYQRRNSIPLDRAIAKDTSGDYEDMLVALLGHGDA 317          
BLAST of FC875471 vs. ExPASy Swiss-Prot
Match: ANXD6_ARATH (Annexin D6 OS=Arabidopsis thaliana GN=ANN6 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.899e-18
Identity = 43/58 (74.14%), Postives = 50/58 (86.21%), Query Frame = 2
Query:    2 TDEWGLTRVVTTRAEVDMQRIMEEYHRRNTVTLEKAIAGDTSGDYERMLLALIGHGDA 175
            TDEW LTRVVTTRAEVD++RI EEY RRN+V L++AIA DTSGDY+ MLLAL+GH  A
Sbjct:  261 TDEWALTRVVTTRAEVDLERIKEEYLRRNSVPLDRAIANDTSGDYKDMLLALLGHDHA 318          
BLAST of FC875471 vs. ExPASy Swiss-Prot
Match: ANXD7_ARATH (Annexin D7 OS=Arabidopsis thaliana GN=ANNAT7 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.091e-17
Identity = 43/58 (74.14%), Postives = 49/58 (84.48%), Query Frame = 2
Query:    2 TDEWGLTRVVTTRAEVDMQRIMEEYHRRNTVTLEKAIAGDTSGDYERMLLALIGHGDA 175
            TDEWGLTRVVTTRAE DM+RI EEY RRN+V L++AIA DT GDYE +LLAL+GH  A
Sbjct:  259 TDEWGLTRVVTTRAEFDMERIKEEYIRRNSVPLDRAIAKDTHGDYEDILLALLGHDHA 316          
BLAST of FC875471 vs. ExPASy Swiss-Prot
Match: ANXD1_ARATH (Annexin D1 OS=Arabidopsis thaliana GN=ANN1 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.881e-15
Identity = 38/58 (65.52%), Postives = 47/58 (81.03%), Query Frame = 2
Query:    2 TDEWGLTRVVTTRAEVDMQRIMEEYHRRNTVTLEKAIAGDTSGDYERMLLALIGHGDA 175
            TDE  LTR+VTTRAE+D++ I EEY RRN++ LEKAI  DT GDYE+ML+AL+G  DA
Sbjct:  260 TDEGALTRIVTTRAEIDLKVIGEEYQRRNSIPLEKAITKDTRGDYEKMLVALLGEDDA 317          
BLAST of FC875471 vs. ExPASy Swiss-Prot
Match: ANX4_FRAAN (Annexin-like protein RJ4 OS=Fragaria ananassa PE=2 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 4.441e-11
Identity = 32/57 (56.14%), Postives = 43/57 (75.44%), Query Frame = 2
Query:    2 TDEWGLTRVVTTRAEVDMQRIMEEYHRRNTVTLEKAIAGDTSGDYERMLLALIGHGD 172
            TDE  LTRV+ TRAE D++ I E Y+++N+V LE+A+A DTSGDY+  LL L+G  D
Sbjct:  258 TDEDALTRVIVTRAERDLRDIKEVYYKKNSVPLEQAVAKDTSGDYKAFLLTLLGKED 314          
The following BLAST results are available for this feature:
BLAST of FC875471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ANXD2_ARATH2.349e-2077.59Annexin D2 OS=Arabidopsis thaliana GN=ANN2 PE=2 SV... [more]
ANXD6_ARATH4.899e-1874.14Annexin D6 OS=Arabidopsis thaliana GN=ANN6 PE=2 SV... [more]
ANXD7_ARATH1.091e-1774.14Annexin D7 OS=Arabidopsis thaliana GN=ANNAT7 PE=2 ... [more]
ANXD1_ARATH3.881e-1565.52Annexin D1 OS=Arabidopsis thaliana GN=ANN1 PE=1 SV... [more]
ANX4_FRAAN4.441e-1156.14Annexin-like protein RJ4 OS=Fragaria ananassa PE=2... [more]
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Properties
Property NameValue
Genbank descriptionC31404C10EF CTVClemen1 Citrus clementina cDNA clone C31404C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875471 ID=FC875471; Name=FC875471; organism=Citrus clementina; type=EST; length=380bp
GACAGACGAATGGGGTCTTACTAGAGTCGTCACCACTCGTGCTGAGGTGG
ATATGCAACGTATCATGGAGGAATACCATAGACGCAACACTGTCACTCTG
GAAAAGGCAATTGCTGGCGACACTTCTGGAGACTATGAGAGAATGCTTCT
TGCTTTGATTGGACATGGAGATGCTTGAGCAATGCTTTTGTATCAGTAGA
GTTTTCTTTCATATGAAAACAGTTTATGGTTTGGTTATTGTTTGTTTAAA
ACTTACTTTATATGCTCATCCTGTGTGTAGCATGTTCCATGTTTATGCAC
TCTTGCCTGTTTTTTAAGAGATTTTAAGAGATGTTTGTTATGAATAAGGT
GCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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