FC875478
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875478 vs. ExPASy Swiss-Prot
Match: FLA17_ARATH (Fasciclin-like arabinogalactan protein 17 OS=Arabidopsis thaliana GN=FLA17 PE=2 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.266e-52 Identity = 107/173 (61.85%), Postives = 127/173 (73.41%), Query Frame = 2 Query: 239 MDPQIYG-------LAFFFLLVVPSVTALPHKTTXXXXXXXXXXXXVLVALLDSHYTEQAELVEKALLLQTLEEAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNVKSLQTLLMFHILPSRIGSRNWPDEKSGSRKHNTLWNDFVHLSSKSSKRLIGSAEIFRPDDITRP 736 MD +IYG FF +L+ + +AL + VLVALLDS YTE AELVEKALLLQTLE+AVGRHNITIFAP+NEALER+LDPEFKRFLLEPGN+KSLQTLLMFHI+P+R+GS WP E+SG KH+TL ND V LS+ K+++ AEI RPDD+TRP Sbjct: 1 MDRRIYGGSAVIHLFLFFSVLIFSAASALSKNQSPSSGSGQINSNSVLVALLDSRYTELAELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLDPEFKRFLLEPGNLKSLQTLLMFHIIPNRVGSNQWPSEESGRVKHHTLGNDQVRLSNGQGKKMVDLAEIIRPDDLTRP 173
BLAST of FC875478 vs. ExPASy Swiss-Prot
Match: FLA18_ARATH (Fasciclin-like arabinogalactan protein 18 OS=Arabidopsis thaliana GN=FLA18 PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.569e-47 Identity = 107/177 (60.45%), Postives = 125/177 (70.62%), Query Frame = 2 Query: 239 MDPQIYG-------LAFFFLLVVPSVTALPHKTTXXXXXXXXXXXXVLVALLDSHYTEQAELVEKALLLQTLEEAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNVKSLQTLLMFHILPSRIGSRNWPDEKSGSRKHNTLWNDFV-HLS---SKSSKRLIGSAEIFRPDDITRP 736 MD IYG +FFFLL ++ + H T VLVALLDS YTE AELVEKALLLQTLE+AVGRHNITIFAP+NEALER+LDP+FKRFLL+PGN+KSLQTLL+ HI+P R+GS WP+E SG KH TL +D V HLS + KRL+ SA I RPDD+TRP Sbjct: 1 MDRCIYGCSVITIFFSFFFLLNASALESGHHNITGSGQINSNS---VLVALLDSRYTELAELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLDPDFKRFLLQPGNLKSLQTLLLSHIIPKRVGSNQWPEENSGRVKHVTLGHDQVLHLSKLKGTNGKRLVNSAVITRPDDLTRP 174
BLAST of FC875478 vs. ExPASy Swiss-Prot
Match: FLA16_ARATH (Fasciclin-like arabinogalactan protein 16 OS=Arabidopsis thaliana GN=FLA16 PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 5.897e-42 Identity = 95/161 (59.01%), Postives = 108/161 (67.08%), Query Frame = 2 Query: 254 YGLAFFFLLVVPSVTALPHKTTXXXXXXXXXXXXVLVALLDSHYTEQAELVEKALLLQTLEEAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNVKSLQTLLMFHILPSRIGSRNWPDEKSGSRKHNTLWNDFVHLSSKSSKRLIGSAEIFRPDDITRP 736 YG F LL+ + + VLVALLDSHYTE AELVEKALLLQTLEEAVG+HNITIFAP+N+ALER LDP FK FLLEP N+KSLQ+LLMFHILP RI S WP S S H TL ND +HL+ + + SAEI RPDD+ RP Sbjct: 5 YGATKFLLLLFLTTSIATALPDNKPVPGQINSNSVLVALLDSHYTELAELVEKALLLQTLEEAVGKHNITIFAPRNDALERNLDPLFKSFLLEPRNLKSLQSLLMFHILPKRITSPQWP---SLSHHHRTLSNDHLHLTVDVNTLKVDSAEIIRPDDVIRP 162
BLAST of FC875478 vs. ExPASy Swiss-Prot
Match: FLA15_ARATH (Fasciclin-like arabinogalactan protein 15 OS=Arabidopsis thaliana GN=FLA15 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.716e-41 Identity = 96/159 (60.38%), Postives = 110/159 (69.18%), Query Frame = 2 Query: 260 LAFFFLLVVPSVTALPHKTTXXXXXXXXXXXXVLVALLDSHYTEQAELVEKALLLQTLEEAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNVKSLQTLLMFHILPSRIGSRNWPDEKSGSRKHNTLWNDFVHLSSKSSKRLIGSAEIFRPDDITRP 736 L FF LL + TALP K VLVALLDSHYTE AELVEKALLLQTLEEAVG+HNITIFAP+N+ALE+ LDPEFK FLL+P N+KSLQ+LLMFHILP RI S P S H TL ND +H ++ + SAEI +PDD+TRP Sbjct: 7 LLFFLLLTISITTALPDKP----GSGQINSNSVLVALLDSHYTELAELVEKALLLQTLEEAVGQHNITIFAPRNDALEKNLDPEFKSFLLQPKNLKSLQSLLMFHILPKRITS---PQFSSAVVSHRTLSNDHLHFTNGK----VNSAEITKPDDLTRP 154 The following BLAST results are available for this feature:
BLAST of FC875478 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875478 ID=FC875478; Name=FC875478; organism=Citrus clementina; type=EST; length=736bpback to top |