FC875499
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875499 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.874e-56 Identity = 109/210 (51.90%), Postives = 133/210 (63.33%), Query Frame = 1 Query: 118 CGSGV-VCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWNHQ-Q*RNAGRL 729 CG+ CG + G++G++I+R MF D+L +RN+ CP +GFYTYDAFI AAKAFP FG +G+ T R REIAAF AQT HETTGGW AP G YAWGYC++ E P YC + +PC KYYGRGPIQ+++NYNY + ATD V+SFK+A WFWMT Q PKPSCH VIT W R+AGRL Sbjct: 44 CGNTADYCGSGCQSQCSSTGDIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGAYCVPSAQWPCAAGRKYYGRGPIQISYNYNYGQA--GKAIGVDLVNNPDLVATDAVISFKTAFWFWMTPQSPKPSCHNVITGGWTPSGADRSAGRL 251
BLAST of FC875499 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 218.394 bits (555), Expect = 3.196e-56 Identity = 105/191 (54.97%), Postives = 126/191 (65.97%), Query Frame = 1 Query: 172 GELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWN-HQQ*RNAGRL 729 G+L IIS F+D+L +RND CPARGFYTY+AFI AAK+FP FG +G+ R +E+AAFF QT HETTGGW AP G Y+WGYCF E +P S YC + +PC +YYGRGP+QL+WNYNY C A D V++FK+AIWFWMTAQPPKPSCH VI +W R AGRL Sbjct: 84 GDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSATWPCASGKRYYGRGPMQLSWNYNYGLC--GRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPSDADRAAGRL 272
BLAST of FC875499 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 4.174e-56 Identity = 105/191 (54.97%), Postives = 126/191 (65.97%), Query Frame = 1 Query: 172 GELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWN-HQQ*RNAGRL 729 G+L IISR F+D+L +RND CPARGFYTYDAFI AAK+FP FG +G+ R +EIAAFF QT HETTGGW AP G Y+WGYCF E +P S YC + +PC YYGRGP+QL+WNYNY +C + DPV++FK+AIWFWMT Q PKPSCH VI +W R AGR+ Sbjct: 69 GDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQC--GRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTPQSPKPSCHAVIVGQWQPSDADRAAGRV 257
BLAST of FC875499 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 9.299e-56 Identity = 107/197 (54.31%), Postives = 129/197 (65.48%), Query Frame = 1 Query: 118 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNL--NYPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEW 696 CG G C + G +L +ISR F+ +L +RND CPA+GFYTYDAFI AAKA+P+FGN+G+ R REIAAF QT HETTGGW AP G YAWGYCF+ E + PS YC+ +PC +YYGRGPIQ++WNYNY +C ATD V+SFKSA+WFWMTAQ PKPS H+VIT W Sbjct: 58 CGPG--CQSQCGGPSPAPTDLSALISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERN-PSTYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQC--GRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRW 249
BLAST of FC875499 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 216.468 bits (550), Expect = 1.215e-55 Identity = 110/190 (57.89%), Postives = 124/190 (65.26%), Query Frame = 1 Query: 139 GERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPC-RGKYY-GRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEW 696 G D G D G L II + F+ LL +RND RCPA GFYTY+AFI AAK FP FGN+G++ MR REIAAF QT HETTGGW DAP G YAWGYC++ EI+ PYC + NY C GK Y GRGPIQL+WNYNY C TDPV+SFK+AIWFWM Q PKPSCH VIT W Sbjct: 76 GGDDGGGDGDDGYLSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEIN-CQPYCDPSSNYQCVAGKQYCGRGPIQLSWNYNYGLC--GDDLKLPLLQEPELVETDPVISFKTAIWFWMKPQSPKPSCHAVITGNW 262
BLAST of FC875499 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.586e-55 Identity = 102/175 (58.29%), Postives = 123/175 (70.29%), Query Frame = 1 Query: 184 KIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEW 696 KIISR MF+ +L +RN+ CPA+GFYTYDAF+ AAK+FP+FG +G+ +R RE+AAF QT HETTGGW AP G YAWGYCF+ E +P S YC + YPC GK YYGRGP+QL+WNYNY C ATD VLSFK+A+WFWMT Q PKPSCH+V+T W Sbjct: 4 KIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRYPCAPGKSYYGRGPLQLSWNYNYGPC--GEALRVNLLGNPDLVATDRVLSFKTALWFWMTPQAPKPSCHDVLTGRW 176
BLAST of FC875499 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.706e-55 Identity = 108/202 (53.47%), Postives = 130/202 (64.36%), Query Frame = 1 Query: 118 CGS-----GVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNL--NYPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEW 696 CGS G C + G +L +ISR F+ +L +RND CPA+GFYTYDAFI AAKA+P+FGN+G+ R REIAAF QT HETTGGW AP G YAWGYCF+ E + PS YC+ +PC +YYGRGPIQ++WNYNY +C ATD V+SFKSA+WFWMTAQ PKPS H+VIT W Sbjct: 50 CGSTTDYCGKDCQSQCGGPSPAPTDLSALISRSTFDQVLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERN-PSAYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQC--GRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRW 248
BLAST of FC875499 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.028e-54 Identity = 107/199 (53.77%), Postives = 128/199 (64.32%), Query Frame = 1 Query: 118 CGSGVVCGERDTGHGTD--GGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLN--YPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEW 696 CG G C + G T GG+LG IIS MF+ +L +RND C +GFY+Y+AFI AA++FP FG SG+ T R REIAAFFAQT HETTGGW AP G YAWGYC++ E P YC + +PC KY+GRGPIQ++ NYNY C ATDPV+SFKSA+WFWMT Q PKPSCH+VI W Sbjct: 54 CGPGN-CQSQCPGGPTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRW 249
BLAST of FC875499 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 212.616 bits (540), Expect = 1.754e-54 Identity = 101/180 (56.11%), Postives = 121/180 (67.22%), Query Frame = 1 Query: 169 GGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLN--YPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEW 696 GG+LG IIS MF+ +L +RND C +GFY+Y+AFI AA++FP FG SG+ T R REIAAFFAQT HETTGGW AP G YAWGYC++ E P YC + +PC KY+GRGPIQ++ NYNY C ATDPV+SFKSA+WFWMT Q PKPSCH+VI W Sbjct: 77 GGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRW 254
BLAST of FC875499 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 3.907e-54 Identity = 107/194 (55.15%), Postives = 130/194 (67.01%), Query Frame = 1 Query: 136 CGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTG--GWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWN 699 C + +G G D G L +I+RE F+ +L +RND CPARGFYTYDAFI AAK+FPAF +G++ R RE+AAF AQT HETTG GW AP G Y WGYC+ E++ P+ YC + NYPC GK Y+GRGP+QLTWNYNY +C ATDP +SFKSA WFWMT Q PKPSCH+VI W+ Sbjct: 58 CQSQCSGSGGDTGGLDSLITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAFLAQTSHETTGGAGWA-APDGPYTWGYCYNRELN-PADYCQWDPNYPCAPGKQYFGRGPMQLTWNYNYGQC--GRAIGVDLLNNPDLLATDPTISFKSAFWFWMTPQSPKPSCHDVIIGAWS 247 The following BLAST results are available for this feature:
BLAST of FC875499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875499 ID=FC875499; Name=FC875499; organism=Citrus clementina; type=EST; length=732bpback to top |