FC875522
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875522 vs. ExPASy Swiss-Prot
Match: GILT_HUMAN (Gamma-interferon-inducible lysosomal thiol reductase OS=Homo sapiens GN=IFI30 PE=1 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 3.688e-19 Identity = 65/189 (34.39%), Postives = 96/189 (50.79%), Query Frame = 1 Query: 127 VKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAK---IRANSTFDCQHGPSECLLNTVEACAIDSWPELNKHFPFIYCIESLVYEHKYSHWETCFDKLE--LDPKPIVDCYTSGYGTQLELKYAAETNSLVPPHQYVLWVVVDGQPLYEDYENFVSYXLQAYKG---NVVPKACSNL 669 V + LYYE+LC F+I L + + ++ I+++ L P+GNA+ + F CQHG EC N VEAC +D ++ F I C+E +E C L P I++C G QL A T++L PPH+YV WV V+G+PL ED ++ Q Y+G +V P + S+L Sbjct: 73 VNVTLYYEALCGGCRAFLIRELFPTW--LLVMEILNVTLVPYGNAQEQNVSGRWEFKCQHGEEECKFNKVEACVLDEL-DMELAFLTIVCMEE--FEDMERSLPLCLQLYAPGLSPDTIMECAMGDRGMQLMHANAQRTDALQPPHEYVPWVTVNGKPL-EDQTQLLTLVCQLYQGKKPDVCPSSTSSL 255
BLAST of FC875522 vs. ExPASy Swiss-Prot
Match: YVRI_CAEEL (GILT-like protein F37H8.5 OS=Caenorhabditis elegans GN=F37H8.5 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17 Identity = 59/188 (31.38%), Postives = 97/188 (51.60%), Query Frame = 1 Query: 67 CFLSGFVSASRTSPSDVNSKVKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKIRANSTFDCQHGPSECLLNTVEACAIDSWPELNKHFPFIYCI-ESLVYEHKYSH-WETCFDKLELD---PKPIVDCYTSGYGTQLELKYAAETNSLVP-PHQYVLWVVVDGQPL--YEDYEN 606 C + F R + N K+ + + E+LCP NF+ L I + + V++ L P+GNAK+ + T CQHG EC +N E C IDS + P + CI ESL + +++ + CF+KL++ + C S G L+ K AA T ++ P H++V WV+++G L ++ ++N Sbjct: 58 CGFASFCDKHRAATH--NQKINITVLIEALCPDCQNFLTKQLYPIVFK-NFANYVNIELVPFGNAKVLEDGTIKCQHGEEECSINKFEGCFIDSMQD-QSPLPTLSCIEESLQKKVEFADAVQQCFEKLQIGGDIQRLTQSCLVSKLGADLQNKAAAATANVWPEQHKFVPWVIINGVSLTSFQGFQN 241
BLAST of FC875522 vs. ExPASy Swiss-Prot
Match: YKJ2_CAEEL (GILT-like protein C02D5.2 OS=Caenorhabditis elegans GN=C02D5.2 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12 Identity = 47/169 (27.81%), Postives = 83/169 (49.11%), Query Frame = 1 Query: 91 ASRTSPSDVNSKVKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKIRANST---FDCQHGPSECLLNTVEACAIDSWPELNKHFPFIYCIESLVYEHKYSHWETCFDKLELDP---KPIVDCYTSGYGTQLELKYAAETNSLVPPHQYVLWVVVDG 579 A T V + VKL +Y E+ CP ++ F L K ++ + L+ ++L++ P+G A+ CQHGP+EC +N + C ID + +++ P + C++ KYS E E P + + +C + G +L +T SL P ++ W+V++G Sbjct: 127 AGPTIKEPVENIVKLDVYMEAQCPDTSRFFRQQLKKAWDILGRLNRIELNVIPFGKARCTEKGNDFECQCQHGPTECQINQLMNCVIDRFGFPHRYLPGVLCMQG-----KYSLDEAMKCVTENYPSEYERMRECASGTRGRRLLALSGQKTASLTPAIDFIPWIVING 290 The following BLAST results are available for this feature:
BLAST of FC875522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875522 ID=FC875522; Name=FC875522; organism=Citrus clementina; type=EST; length=692bpback to top |