FC875527
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875527 vs. ExPASy Swiss-Prot
Match: AMYB_ARATH (Beta-amylase OS=Arabidopsis thaliana GN=BMY1 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.138e-30 Identity = 75/221 (33.94%), Postives = 118/221 (53.39%), Query Frame = 1 Query: 1 GNPLWGLRGPHDAPSYDESPNSNSFFKDNGGSWESPYGDFFLSWYSSQLISHGNCLLSLASSTFGETGVSIYGKIPLIHSWYKTRSHPSELTAGFYNTAKRDGYAAVAEMFAKNSCKMILPGMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGFEQMKKNLFGENV---------VDLFTYQRMGAYFFSPEHFPSFTKFVRNLN 636 G+P W L P DA Y++ P FFK +G ++ S G FF++WYS++LI HG+ +L A+ F V++ K+ IH Y SH +ELTAG+YN KRDGY +A M +K+ + +++ D E+ S+P+ L+ ++ + K G+EV+G+N+ T G+ Q+ N V + FTY R+ F +F F K VR ++ Sbjct: 228 GHPEWDL--PEDAGEYNDKPEETGFFKKDG-TYVSEKGKFFMTWYSNKLIFHGDQILGEANKIFAGLKVNLAAKVSGIHWLYNHHSHAAELTAGYYNLFKRDGYRPIARMLSKHYGILNFTCLEMKDTDNTAEALSAPQELVQEVLSKAWKEGIEVAGENALETYGAKGYNQILLNARPNGVNPNGKPKLRMYGFTYLRLSDTVFQENNFELFKKLVRKMH 445
BLAST of FC875527 vs. ExPASy Swiss-Prot
Match: AMYB_IPOBA (Beta-amylase OS=Ipomoea batatas GN=BMY1 PE=1 SV=4) HSP 1 Score: 132.109 bits (331), Expect = 2.792e-30 Identity = 78/240 (32.50%), Postives = 129/240 (53.75%), Query Frame = 1 Query: 1 GNPLWGLRGPHDAPSYDESPNSNSFFKDNGGSWESPYGDFFLSWYSSQLISHGNCLLSLASSTFGETGVSIYGKIPLIHSWYKTRSHPSELTAGFYNTAKRDGYAAVAEMFAKNSCKMILPGMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGFEQMKKNLFGENV---------VDLFTYQRMGAYFFSPEHFPSFTKFVRNLNQLELHGDDLPVEEEVTESV 693 GN W + G A +Y+++P+ FF+ NG ++++ G FFL+WYS++LI HG+ +L A+ F V+I K+ IH WY SH +ELTAGFYN A RDGY +A M A++ + +++ D QP E+ S+P+ L+ Q+ ++ K ++V+G+N+ + QM N+ V + TY R+ ++F F KFV+ ++H D P ++ +V Sbjct: 227 GNADWEMPGK-GAGTYNDTPDKTEFFRPNG-TYKTDMGKFFLTWYSNKLIIHGDQVLEEANKVFVGLRVNIAAKVSGIHWWYNHVSHAAELTAGFYNVAGRDGYRPIARMLARHHATLNFTCLEMRDSEQPAEAKSAPQELVQQVLSSGWKEYIDVAGENALPRYDATAYNQMLLNVRPNGVNLNGPPKLKMSGLTYLRLSDDLLQTDNFELFKKFVK-----KMHADLDPSPNAISPAV 459
BLAST of FC875527 vs. ExPASy Swiss-Prot
Match: AMYB_WHEAT (Beta-amylase OS=Triticum aestivum GN=BMY1 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.173e-28 Identity = 74/221 (33.48%), Postives = 118/221 (53.39%), Query Frame = 1 Query: 1 GNPLWGLRGPHDAPSYDESPNSNSFFKDNGGSWESPYGDFFLSWYSSQLISHGNCLLSLASSTFGETGVSIYGKIPLIHSWYKTRSHPSELTAGFYNTAKRDGYAAVAEMFAKNSCKMILPGMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGF---------EQMKKNLFGENVVDLFTYQRMGAYFFSPEHFPSFTKFVRNLN 636 G+P W L P DA Y+++P FFKDNG ++ + G FFLSWYS++LI HG+ +L A+ F V + KI IH WY+ +H +ELTAG+YN RDGY +A M ++ M ++ D Q E+ S+PE L+ Q+ +A + G+ V+ +N+ + + + KN E+ + FTY R+ +++ +F FV ++ Sbjct: 223 GHPEWEL--PDDAGEYNDTPEKTQFFKDNG-TYLTEKGKFFLSWYSNKLIKHGDKILDEANKVFLGCRVQLAIKISGIHWWYRVPNHAAELTAGYYNLDDRDGYRTIARMLTRHHASMNFTCAEMRDSEQSEEAKSAPEELVQQVLSAGWREGLHVACENALGRYDATAYNTILRNARPKGINKNGPPEHKLFGFTYLRLSNELLEGQNYATFQTFVEKMH 440
BLAST of FC875527 vs. ExPASy Swiss-Prot
Match: AMYB_SOYBN (Beta-amylase OS=Glycine max GN=BMY1 PE=1 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 1.532e-28 Identity = 74/228 (32.46%), Postives = 121/228 (53.07%), Query Frame = 1 Query: 1 GNPLWGLRGPHDAPSYDESPNSNSFFKDNGGSWESPYGDFFLSWYSSQLISHGNCLLSLASSTFGETGVSIYGKIPLIHSWYKTRSHPSELTAGFYNTAKRDGYAAVAEMFAKNSCKMILPGMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGFEQMKKNLFGENV-------VDLF--TYQRMGAYFFSPEHFPSFTKFVRNLNQLELHGD 657 G+P W L P DA Y++ P S FFK NG ++ + G FFL+WYS++L++HG+ +L A+ F V + K+ IH WYK +H +ELTAG+YN RDGY +A M +++ + +++ D QP ++ S P+ L+ Q+ + + + V+G+N+ + Q+ N + V + +F TY R+ +F F KFV L++H D Sbjct: 226 GHPEWEL--PDDAGKYNDVPESTGFFKSNG-TYVTEKGKFFLTWYSNKLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKVENHAAELTAGYYNLNDRDGYRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQVLSGGWREDIRVAGENALPRYDATAYNQIILNAKPQGVNNNGPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFV-----LKMHAD 445
BLAST of FC875527 vs. ExPASy Swiss-Prot
Match: AMYB_MAIZE (Beta-amylase OS=Zea mays GN=BMY1 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.613e-28 Identity = 76/247 (30.77%), Postives = 127/247 (51.42%), Query Frame = 1 Query: 1 GNPLWGLRGPHDAPSYDESPNSNSFFKDNGGSWESPYGDFFLSWYSSQLISHGNCLLSLASSTFGETGVSIYGKIPLIHSWYKTRSHPSELTAGFYNTAKRDGYAAVAEMFAKNSCKMILPGMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGF---------EQMKKNLFGENVVDLFTYQRMGAYFFSPEHFPSFTKFVRNLN-------------QLELHGDDLPVEE 675 G+P W L DA +Y+++P FF DNG ++++ G FFL+WYS++LI HG+ +L A+ F V + K+ IH WY +H +ELTAG+YN RDGY +A M ++ M ++ D Q E+ S+PE L+ Q+ +A + G+ ++ +N+ + + + KN E+ + FTY R+ F +++ +F FVR ++ LE ++P+EE Sbjct: 223 GHPEWDLLD--DAGTYNDTPEKTQFFADNG-TYQTDKGKFFLTWYSNKLIKHGDKILDEANKVFLGCKVQLAIKVSGIHWWYNVPNHAAELTAGYYNLDDRDGYRTIAHMLTRHRASMNFTCAEMRDSEQSSEAKSAPEELVQQVLSAGWREGLNLACENALNRYDATAYNTILRNARPQGINKNGPPEHKLHGFTYLRVSDELFQEQNYTTFKTFVRRMHANLDYNPNVDPVAPLERSKAEIPIEE 466
BLAST of FC875527 vs. ExPASy Swiss-Prot
Match: AMYB_TRIRP (Beta-amylase OS=Trifolium repens GN=BMY1 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.822e-28 Identity = 73/229 (31.88%), Postives = 123/229 (53.71%), Query Frame = 1 Query: 1 GNPLWGLRGPHDAPSYDESPNSNSFFKDNGGSWESPYGDFFLSWYSSQLISHGNCLLSLASSTFGETGVSIYGKIPLIHSWYKTRSHPSELTAGFYNTAKRDGYAAVAEMFAKNSCKMILPGMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGFEQMKKNLFGENV---------VDLFTYQRMGAYFFSPEHFPSFTKFVRNLNQLELHGDD 660 G+ W L P DA +Y++ P S FFK NG ++ + G FFL+WYS+QL++HG+ +L A+ F V + K+ IH WYK ++H +ELTAG+YN RDGY +A+M +++ + +++ D Q ++ S+P+ L+ Q+ + + +EV+G+N+ + Q+ N + V + TY R+ +F F KFV ++ + H DD Sbjct: 226 GHSEWEL--PDDAGTYNDIPESTEFFKTNG-TYLTEKGKFFLTWYSNQLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKAQNHAAELTAGYYNLDDRDGYRPIAKMVSRHHGILNFTCLEMRDSEQSSDAQSAPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQIILNARPQGVNKDGPPKLRMYGVTYLRLSDDLLQESNFEIFKKFVVKMHADQSHCDD 451
BLAST of FC875527 vs. ExPASy Swiss-Prot
Match: AMYB_HORSP (Beta-amylase OS=Hordeum spontaneum GN=BMY1 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.822e-28 Identity = 73/227 (32.16%), Postives = 117/227 (51.54%), Query Frame = 1 Query: 1 GNPLWGLRGPHDAPSYDESPNSNSFFKDNGGSWESPYGDFFLSWYSSQLISHGNCLLSLASSTFGETGVSIYGKIPLIHSWYKTRSHPSELTAGFYNTAKRDGYAAVAEMFAKNSCKMILPGMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGFEQMKKN---------------LFGENVVDLFTYQRMGAYFFSPEHFPSFTKFVRNLN 636 G+P W P+DA Y+++P FF+DNG ++ + G FFL+WYS+ LI HG+ +L A+ F V + KI IH WYK SH +ELTAG+YN RDGY +A M ++ + ++ D Q ++ S+PE L+ Q+ +A + G+ V+ +N+ P + + +N LFG FTY R+ +++ +F FV ++ Sbjct: 223 GHPEWEF--PNDAGQYNDTPERTQFFRDNG-TYLTEKGRFFLAWYSNNLIKHGDRILDEANKVFLGYKVQLAIKISGIHWWYKVPSHAAELTAGYYNLHDRDGYRTIARMLKRHRASINFTCAEMRDSEQSSQAMSAPEELVQQVLSAGWREGLNVACENALPRYDPTAYNTILRNARPHGINQSGPPEHKLFG------FTYLRLSNQLVEGQNYVNFKTFVDRMH 440
BLAST of FC875527 vs. ExPASy Swiss-Prot
Match: AMYB_VIGUN (Beta-amylase OS=Vigna unguiculata GN=BMY1 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.694e-27 Identity = 72/228 (31.58%), Postives = 122/228 (53.51%), Query Frame = 1 Query: 1 GNPLWGLRGPHDAPSYDESPNSNSFFKDNGGSWESPYGDFFLSWYSSQLISHGNCLLSLASSTFGETGVSIYGKIPLIHSWYKTRSHPSELTAGFYNTAKRDGYAAVAEMFAKNSCKMILPGMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGFEQMKKNLFGENV---------VDLFTYQRMGAYFFSPEHFPSFTKFVRNLNQLELHGD 657 G+ W L P DA +Y++ P S FFK NG ++ + G FFL+WYS+QL++HG+ +L A+ F V++ K+ IH WYK ++H +ELTAG+YN RDGY +A+M +++ + +++ D Q ++ S P+ L+ Q+ + + +EV+G+N+ + Q+ N + V + TY R+ +F F KFV +++H D Sbjct: 226 GHSEWEL--PDDAGTYNDVPESTEFFKTNG-TYLTEKGKFFLTWYSNQLLNHGDEILDEANKAFLGCKVNLAIKVSGIHWWYKAQNHAAELTAGYYNLDDRDGYRPIAKMVSRHHASLNFTCLEMRDSEQSSDAQSGPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQIILNARPQGVNKDGPPKHRMYGVTYLRLSDELLQQSNFDIFKKFV-----VKMHAD 445
BLAST of FC875527 vs. ExPASy Swiss-Prot
Match: AMYB_HORVU (Beta-amylase OS=Hordeum vulgare GN=BMY1 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.694e-27 Identity = 73/227 (32.16%), Postives = 116/227 (51.10%), Query Frame = 1 Query: 1 GNPLWGLRGPHDAPSYDESPNSNSFFKDNGGSWESPYGDFFLSWYSSQLISHGNCLLSLASSTFGETGVSIYGKIPLIHSWYKTRSHPSELTAGFYNTAKRDGYAAVAEMFAKNSCKMILPGMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGFEQMKKN---------------LFGENVVDLFTYQRMGAYFFSPEHFPSFTKFVRNLN 636 G+P W P+D Y+++P FF+DNG ++ S G FFL+WYS+ LI HG+ +L A+ F V + KI IH WYK SH +ELTAG+YN RDGY +A M ++ + ++ D Q ++ S+PE L+ Q+ +A + G+ V+ +N+ P + + +N LFG FTY R+ +++ +F FV ++ Sbjct: 223 GHPEWEF--PNDVGQYNDTPERTQFFRDNG-TYLSEKGRFFLAWYSNNLIKHGDRILDEANKVFLGYKVQLAIKISGIHWWYKVPSHAAELTAGYYNLHDRDGYRTIARMLKRHRASINFTCAEMRDLEQSSQAMSAPEELVQQVLSAGWREGLNVACENALPRYDPTAYNTILRNARPHGINQSGPPEHKLFG------FTYLRLSNQLVEGQNYVNFKTFVDRMH 440
BLAST of FC875527 vs. ExPASy Swiss-Prot
Match: AMYB_MEDSA (Beta-amylase OS=Medicago sativa GN=BMY1 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.437e-27 Identity = 72/228 (31.58%), Postives = 121/228 (53.07%), Query Frame = 1 Query: 1 GNPLWGLRGPHDAPSYDESPNSNSFFKDNGGSWESPYGDFFLSWYSSQLISHGNCLLSLASSTFGETGVSIYGKIPLIHSWYKTRSHPSELTAGFYNTAKRDGYAAVAEMFAKNSCKMILPGMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGFEQMKKNLFGENV---------VDLFTYQRMGAYFFSPEHFPSFTKFVRNLNQLELHGD 657 G+ W L P DA +Y++ P S FFK NG ++ + G FFL+WYS+QL++HG+ +L A+ F V + K+ IH WYK +H +ELTAG+YN RDGY +A++ +++ + +++ D Q ++ SSP+ L+ Q+ + + +EV+G+N+ + Q+ N + V + TY R+ +F F KFV +++H D Sbjct: 226 GHSEWEL--PDDAGTYNDVPESTEFFKTNG-TYLTEKGKFFLTWYSNQLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKAPNHAAELTAGYYNLDDRDGYRPIAKIVSRHHAILNFTCLEMRDSEQSSDAHSSPQKLVQQVLSGGWRENIEVAGENALSRYDATAYNQIILNARPQGVNKDGPPKLRMYGVTYLRLSDDLMQQSNFDIFKKFV-----VKMHAD 445 The following BLAST results are available for this feature:
BLAST of FC875527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875527 ID=FC875527; Name=FC875527; organism=Citrus clementina; type=EST; length=700bpback to top |