FC875545
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875545 vs. ExPASy Swiss-Prot
Match: PPDE2_XENLA (PPPDE peptidase domain-containing protein 2 OS=Xenopus laevis GN=pppde2 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.214e-34 Identity = 73/160 (45.62%), Postives = 103/160 (64.38%), Query Frame = 3 Query: 195 DMAEESHKVSLHVYDLSQGLARQLSMSFLGKAIGGIWHTGIVVYGNEYYFGG-GIQHDCVGATPYGKPLRVVELGETHVPKDVFEMYLEEISPR-YTAEKYSLLSHNCNNFSNEVAQFLVGKMIPEYILNLPNEVMSSPMGALVLPMIQNLESTMKAGAV 668 + AE H V L+VYD+S+GLAR+LS LGK + GIWHT I+V+ E+++G GI G T G+P V+ELG T V +++F YL + ++ E Y L HNCN FSNEVAQFL GK IP YI LP+EV+S+P+G + P++ +++ G + Sbjct: 2 ETAEGPHLVRLYVYDMSRGLARRLSPVMLGKQLEGIWHTSIIVFDEEFFYGREGITSCLPGRTMLGEPDSVMELGITEVTEEIFLEYLSSLGESGFSGESYHLFDHNCNTFSNEVAQFLTGKKIPSYITELPSEVLSTPLGQALRPLLDSVQIQPAGGNI 161
BLAST of FC875545 vs. ExPASy Swiss-Prot
Match: PPDE2_HUMAN (PPPDE peptidase domain-containing protein 2 OS=Homo sapiens GN=PPPDE2 PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.221e-33 Identity = 72/153 (47.06%), Postives = 101/153 (66.01%), Query Frame = 3 Query: 213 HKVSLHVYDLSQGLARQLSMSFLGKAIGGIWHTGIVVYGNEYYFG-GGIQHDCVGATPYGKPLRVVELGETHVPKDVFEMYLEEISPR-YTAEKYSLLSHNCNNFSNEVAQFLVGKMIPEYILNLPNEVMSSPMGALVLPMIQNLESTMKAGA 665 + V L+VYDLS+GLAR+LS LGK + GIWHT IVV+ +E++FG GGI G T G P VV++G T V +++F YL + + E Y+L HNCN FSNEVAQFL G+ IP YI +LP+EV+S+P G + P++ +++ G+ Sbjct: 7 YPVKLYVYDLSKGLARRLSPIMLGKQLEGIWHTSIVVHKDEFFFGSGGISSCPPGGTLLGPPDSVVDVGSTEVTEEIFLEYLSSLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDLPSEVLSTPFGQALRPLLDSIQIQPPGGS 159
BLAST of FC875545 vs. ExPASy Swiss-Prot
Match: PPDE2_RAT (PPPDE peptidase domain-containing protein 2 OS=Rattus norvegicus GN=Pppde2 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.916e-33 Identity = 70/146 (47.95%), Postives = 97/146 (66.44%), Query Frame = 3 Query: 213 HKVSLHVYDLSQGLARQLSMSFLGKAIGGIWHTGIVVYGNEYYFGG-GIQHDCVGATPYGKPLRVVELGETHVPKDVFEMYLEEISPR-YTAEKYSLLSHNCNNFSNEVAQFLVGKMIPEYILNLPNEVMSSPMGALVLPMIQNLE 644 + V L+VYDLS+GLAR+LS LGK + GIWHT IVV+ +E++FG GI G T G P VV++G T V +++F YL + + E Y+L HNCN FSNEVAQFL G+ IP YI +LP+EV+S+P G + P + +++ Sbjct: 7 YPVKLYVYDLSKGLARRLSPIMLGKQLEGIWHTSIVVHKDEFFFGSSGISSCTPGGTLLGPPDSVVDVGNTEVTEEIFLEYLSSLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDLPSEVLSTPFGQALRPFLDSIQ 152
BLAST of FC875545 vs. ExPASy Swiss-Prot
Match: PPDE2_MOUSE (PPPDE peptidase domain-containing protein 2 OS=Mus musculus GN=Pppde2 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.916e-33 Identity = 70/146 (47.95%), Postives = 97/146 (66.44%), Query Frame = 3 Query: 213 HKVSLHVYDLSQGLARQLSMSFLGKAIGGIWHTGIVVYGNEYYFGG-GIQHDCVGATPYGKPLRVVELGETHVPKDVFEMYLEEISPR-YTAEKYSLLSHNCNNFSNEVAQFLVGKMIPEYILNLPNEVMSSPMGALVLPMIQNLE 644 + V L+VYDLS+GLAR+LS LGK + GIWHT IVV+ +E++FG GI G T G P VV++G T V +++F YL + + E Y+L HNCN FSNEVAQFL G+ IP YI +LP+EV+S+P G + P + +++ Sbjct: 7 YPVKLYVYDLSKGLARRLSPIMLGKQLEGIWHTSIVVHKDEFFFGSSGISSCTPGGTLLGPPDSVVDVGNTEVTEEIFLEYLSSLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDLPSEVLSTPFGQALRPFLDSIQ 152 The following BLAST results are available for this feature:
BLAST of FC875545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875545 ID=FC875545; Name=FC875545; organism=Citrus clementina; type=EST; length=704bpback to top |