FC875560

Overview
NameFC875560
Unique NameFC875560
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length751
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15423 contig Ccv1_Contig15423:43..793. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: ENPL_CATRO (Endoplasmin homolog OS=Catharanthus roseus GN=HSP90 PE=2 SV=1)

HSP 1 Score: 343.969 bits (881), Expect = 5.277e-94
Identity = 179/216 (82.87%), Postives = 191/216 (88.43%), Query Frame = 2
Query:   71 MRKWTIPSIXXXXXXXXXIPDQGRNIQAKAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESISKRSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXEVI*QH 718
            MRKWT+PS+            QGR I A AE +SD  VDPPKVE+K+GAVPNGLSTDSDVAKREAES+S R+LR++AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFL+LTDKE+LGEGD  KLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYL  DY EVI +H
Sbjct:    1 MRKWTVPSVLFLLCPSLSSSCQGRKIHANAEADSDAPVDPPKVEDKIGAVPNGLSTDSDVAKREAESMSMRNLRSDAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLALTDKEILGEGDTAKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVPDYVEVISKH 216          
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: ENPL_HORVU (Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 3.913e-89
Identity = 167/216 (77.31%), Postives = 187/216 (86.57%), Query Frame = 2
Query:   71 MRKWTIPSIXXXXXXXXXIPDQGRNIQAKAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESISKRSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXEVI*QH 718
            MRKW +            +PD  + +Q  AE+ SD++ D PKVEEKLGAVP+GLSTDS+V +RE+ESIS+++LRN+AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFL+LTDKEV+GEGD  KLEIQIKLDKE KILSIRDRG+GMTKEDLIKNLGTIAKSGTSAFVEKMQT GDLNLIGQFGVGFYSVYL ADY EV+ +H
Sbjct:    1 MRKWALSCALLLVLLLTTLPDPAKKLQVNAEESSDEVGDFPKVEEKLGAVPHGLSTDSEVVQRESESISRKTLRNSAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLALTDKEVMGEGDTAKLEIQIKLDKENKILSIRDRGVGMTKEDLIKNLGTIAKSGTSAFVEKMQTGGDLNLIGQFGVGFYSVYLVADYVEVVSKH 216          
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: ENPL_ARATH (Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD PE=1 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 4.327e-88
Identity = 170/216 (78.70%), Postives = 186/216 (86.11%), Query Frame = 2
Query:   71 MRKWTIPSIXXXXXXXXXIPDQGRNIQAKAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESISKRSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXEVI*QH 718
            MRK T+ S+         +PDQGR + A AE+ SD + DPPKVEEK+G    GLSTDSDV  RE+ES+SK++LR+NAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFL+LTDK+VLGEGD  KLEIQIKLDK KKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQ+SGDLNLIGQFGVGFYS YL ADY EVI +H
Sbjct:    1 MRKRTLVSVLFLFSLLFLLPDQGRKLHANAEESSDDVTDPPKVEEKIGG-HGGLSTDSDVVHRESESMSKKTLRSNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLALTDKDVLGEGDTAKLEIQIKLDKAKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQSSGDLNLIGQFGVGFYSAYLVADYIEVISKH 215          
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: ENPL_PIG (Endoplasmin OS=Sus scrofa GN=HSP90B1 PE=2 SV=3)

HSP 1 Score: 187.578 bits (475), Expect = 6.320e-47
Identity = 111/201 (55.22%), Postives = 136/201 (67.66%), Query Frame = 2
Query:  155 KAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESISK--------RSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGD-----LNLIGQFGVGFYSVYLGADYXEVI*QH 718
            +AEDE D  VD   VEE LG    G  TD +V +RE E+I          R LR  +EKF FQAEV+R+M +IINSLY NK+IFLRELISNASDALDKIR +SLTD+  L    N +L ++IK DKEK +L + D G+GMT+E+L+KNLGTIAKSGTS F+ KM  + +       LIGQFGVGFYS +L AD   V  +H
Sbjct:   20 RAEDEVD--VDGT-VEEDLGKSREGSRTDDEVVQREEEAIQLDGLNASQIRELREKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENAL--AGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMAEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKH 215          
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: ENPL_MOUSE (Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.408e-46
Identity = 110/201 (54.73%), Postives = 136/201 (67.66%), Query Frame = 2
Query:  155 KAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESISK--------RSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGD-----LNLIGQFGVGFYSVYLGADYXEVI*QH 718
            +A+DE D  VD   VEE LG    G  TD +V +RE E+I          R LR  +EKF FQAEV+R+M +IINSLY NK+IFLRELISNASDALDKIR +SLTD+  L    N +L ++IK DKEK +L + D G+GMT+E+L+KNLGTIAKSGTS F+ KM  + +       LIGQFGVGFYS +L AD   V  +H
Sbjct:   20 RADDEVD--VDGT-VEEDLGKSREGSRTDDEVVQREEEAIQLDGLNASQIRELREKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENAL--AGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKH 215          
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: ENPL_MACFA (Endoplasmin OS=Macaca fascicularis GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.408e-46
Identity = 110/201 (54.73%), Postives = 136/201 (67.66%), Query Frame = 2
Query:  155 KAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESISK--------RSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGD-----LNLIGQFGVGFYSVYLGADYXEVI*QH 718
            +A+DE D  VD   VEE LG    G  TD +V +RE E+I          R LR  +EKF FQAEV+R+M +IINSLY NK+IFLRELISNASDALDKIR +SLTD+  L    N +L ++IK DKEK +L + D G+GMT+E+L+KNLGTIAKSGTS F+ KM  + +       LIGQFGVGFYS +L AD   V  +H
Sbjct:   20 RADDEVD--VDGT-VEEDLGKSREGSRTDDEVVQREEEAIQLDGLNASQIRELREKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENAL--SGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKH 215          
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: ENPL_HUMAN (Endoplasmin OS=Homo sapiens GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.408e-46
Identity = 110/201 (54.73%), Postives = 136/201 (67.66%), Query Frame = 2
Query:  155 KAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESISK--------RSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGD-----LNLIGQFGVGFYSVYLGADYXEVI*QH 718
            +A+DE D  VD   VEE LG    G  TD +V +RE E+I          R LR  +EKF FQAEV+R+M +IINSLY NK+IFLRELISNASDALDKIR +SLTD+  L    N +L ++IK DKEK +L + D G+GMT+E+L+KNLGTIAKSGTS F+ KM  + +       LIGQFGVGFYS +L AD   V  +H
Sbjct:   20 RADDEVD--VDGT-VEEDLGKSREGSRTDDEVVQREEEAIQLDGLNASQIRELREKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENAL--SGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKH 215          
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: ENPL_CANFA (Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.408e-46
Identity = 110/201 (54.73%), Postives = 136/201 (67.66%), Query Frame = 2
Query:  155 KAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESISK--------RSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGD-----LNLIGQFGVGFYSVYLGADYXEVI*QH 718
            +A+DE D  VD   VEE LG    G  TD +V +RE E+I          R LR  +EKF FQAEV+R+M +IINSLY NK+IFLRELISNASDALDKIR +SLTD+  L    N +L ++IK DKEK +L + D G+GMT+E+L+KNLGTIAKSGTS F+ KM  + +       LIGQFGVGFYS +L AD   V  +H
Sbjct:   20 RADDEVD--VDGT-VEEDLGKSREGSRTDDEVVQREEEAIQLDGLNASQIRELREKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENAL--AGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKH 215          
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: ENPL_BOVIN (Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.408e-46
Identity = 110/201 (54.73%), Postives = 136/201 (67.66%), Query Frame = 2
Query:  155 KAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESISK--------RSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGD-----LNLIGQFGVGFYSVYLGADYXEVI*QH 718
            +A+DE D  VD   VEE LG    G  TD +V +RE E+I          R LR  +EKF FQAEV+R+M +IINSLY NK+IFLRELISNASDALDKIR +SLTD+  L    N +L ++IK DKEK +L + D G+GMT+E+L+KNLGTIAKSGTS F+ KM  + +       LIGQFGVGFYS +L AD   V  +H
Sbjct:   20 RADDEVD--VDGT-VEEDLGKSREGSRTDDEVVQREEEAIQLDGLNASQIRELREKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENAL--AGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKH 215          
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: ENPL_RAT (Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 3.137e-46
Identity = 109/201 (54.23%), Postives = 136/201 (67.66%), Query Frame = 2
Query:  155 KAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESISK--------RSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGD-----LNLIGQFGVGFYSVYLGADYXEVI*QH 718
            +A+DE D  VD   VEE LG    G  TD +V +RE E+I          R LR  +EKF FQAEV+R+M +IINSLY NK+IFLRELISNASDALDKIR +SLTD+  L    N +L ++IK D+EK +L + D G+GMT+E+L+KNLGTIAKSGTS F+ KM  + +       LIGQFGVGFYS +L AD   V  +H
Sbjct:   20 RADDEVD--VDGT-VEEDLGKSREGSRTDDEVVQREEEAIQLDGLNASQIRELREKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENAL--AGNEELTVKIKCDREKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKH 215          
The following BLAST results are available for this feature:
BLAST of FC875560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
ENPL_CATRO5.277e-9482.87Endoplasmin homolog OS=Catharanthus roseus GN=HSP9... [more]
ENPL_HORVU3.913e-8977.31Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1[more]
ENPL_ARATH4.327e-8878.70Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD... [more]
ENPL_PIG6.320e-4755.22Endoplasmin OS=Sus scrofa GN=HSP90B1 PE=2 SV=3[more]
ENPL_MOUSE1.408e-4654.73Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2[more]
ENPL_MACFA1.408e-4654.73Endoplasmin OS=Macaca fascicularis GN=HSP90B1 PE=2... [more]
ENPL_HUMAN1.408e-4654.73Endoplasmin OS=Homo sapiens GN=HSP90B1 PE=1 SV=1[more]
ENPL_CANFA1.408e-4654.73Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV... [more]
ENPL_BOVIN1.408e-4654.73Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1[more]
ENPL_RAT3.137e-4654.23Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionC31405C07EF CTVClemen1 Citrus clementina cDNA clone C31405C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875560 ID=FC875560; Name=FC875560; organism=Citrus clementina; type=EST; length=751bp
GAATAGGCAATAATTTGATCATTTTTAGCTGATCGAAGATACTAGAACTA
TACTAATTTCAAAGTTAACAATGAGGAAGTGGACAATCCCTTCCATATTG
CTTCTCCTTTTCCTTCTCGCCCTGATTCCAGATCAAGGCCGAAATATACA
GGCAAAAGCAGAGGATGAATCTGATAAACTAGTGGATCCTCCTAAGGTCG
AGGAGAAACTCGGAGCCGTACCAAATGGTTTGTCGACAGATTCTGACGTG
GCAAAGAGGGAAGCGGAGTCGATCTCGAAGAGGTCACTTCGTAATAATGC
GGAGAAATTTGAATTCCAAGCTGAGGTGTCTCGGCTCATGGATATTATCA
TCAATTCTCTTTACAGCAACAAAGATATTTTCCTCAGAGAGTTGATTTCC
AATGCTTCTGATGCACTAGACAAGATTAGATTCCTCTCTTTGACTGACAA
AGAGGTCTTGGGAGAAGGAGACAACACTAAGCTGGAGATCCAGATTAAGC
TAGACAAAGAGAAGAAAATTCTTTCAATTCGTGACAGAGGTATTGGTATG
ACGAAGGAGGATTTAATCAAGAACTTGGGAACCATTGCAAAATCTGGAAC
ATCAGCATTTGTTGAGAAAATGCAGACTAGCGGTGACCTCAATCTTATTG
GGCAATTTGGTGTTGGCTTTTACTCTGTATATCTTGGTGCTGACTATGNT
GAAGTCATTTAGCAACATATGATGACAACAGTATGTATGGGAATCAAGGC
T
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