FC875597

Overview
NameFC875597
Unique NameFC875597
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875597 vs. ExPASy Swiss-Prot
Match: BD31B_ORYSJ (Protein BUD31 homolog 2 OS=Oryza sativa subsp. japonica GN=Os05g0446300 PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.236e-75
Identity = 120/145 (82.76%), Postives = 136/145 (93.79%), Query Frame = 2
Query:  143 MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKHVECVHCGCKGCASGD 577
            MPK++T+R KYP+GWELI PTLR++EAKMREAENDPHDGKRKCE LWPIF+I+HQ+S+YI++LYY+R EISKELYEFCLDQG+ D NLIAKWKKPGYERLCCLRCIQ RDHNF TTCVCRVPKHLREEK +ECVHCGC+GCASGD
Sbjct:    1 MPKIKTSRVKYPEGWELIEPTLRDLEAKMREAENDPHDGKRKCEALWPIFRISHQKSRYIYDLYYRRKEISKELYEFCLDQGHADKNLIAKWKKPGYERLCCLRCIQTRDHNFATTCVCRVPKHLREEKVIECVHCGCRGCASGD 145          
BLAST of FC875597 vs. ExPASy Swiss-Prot
Match: BD31A_ORYSJ (Protein BUD31 homolog 1 OS=Oryza sativa subsp. japonica GN=Os01g0857700 PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 6.137e-75
Identity = 120/145 (82.76%), Postives = 134/145 (92.41%), Query Frame = 2
Query:  143 MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKHVECVHCGCKGCASGD 577
            MPK++T+R KYP GWELI PT+RE++AKMREAEND HDGKRKCE LWPIF+I+HQRS+YI++LYY+R EISKELYEFCLDQGY D NLIAKWKKPGYERLCCLRCIQ RDHNF TTCVCRVPKHLREEK +ECVHCGC+GCASGD
Sbjct:    1 MPKIKTSRVKYPGGWELIEPTIRELDAKMREAENDTHDGKRKCEALWPIFRISHQRSRYIYDLYYRRKEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLRCIQTRDHNFATTCVCRVPKHLREEKVIECVHCGCRGCASGD 145          
BLAST of FC875597 vs. ExPASy Swiss-Prot
Match: BD31C_ORYSJ (Protein BUD31 homolog 3 OS=Oryza sativa subsp. japonica GN=Os12g0149800 PE=2 SV=2)

HSP 1 Score: 270.396 bits (690), Expect = 6.350e-72
Identity = 116/145 (80.00%), Postives = 130/145 (89.66%), Query Frame = 2
Query:  143 MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEKHVECVHCGCKGCASGD 577
            MPK++T+  KYPDGWELI PTL E+ +KMREAENDPHDG+RKCE LWPIFKI HQRS+Y+++LYY R EIS+ELYEFCLDQG+ D NLIAKWKK GYERLCCLRCIQ RDHNF TTCVCRVPKHLREE+ +ECVHCGCKGCASGD
Sbjct:    1 MPKIKTSGVKYPDGWELIEPTLSELHSKMREAENDPHDGRRKCEALWPIFKINHQRSRYLYDLYYNRKEISQELYEFCLDQGHADRNLIAKWKKQGYERLCCLRCIQTRDHNFATTCVCRVPKHLREEQVIECVHCGCKGCASGD 145          
BLAST of FC875597 vs. ExPASy Swiss-Prot
Match: BUD31_BRABE (Protein BUD31 homolog OS=Branchiostoma belcheri PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.590e-57
Identity = 98/143 (68.53%), Postives = 116/143 (81.12%), Query Frame = 2
Query:  143 MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPK-HLREEKHVECVHCGCKGCA 568
            MPKVR +R   P+GWELI PTL E++ KMREAE +PH+GKRK E LWPIFKI HQ+S+YIF+L+Y+R  IS+ELYE+CL +G  D NLIAKWKK GYE LCCLRCIQ RD NFGT C+CRVPK  L E + VECVHCGC+GC+
Sbjct:    1 MPKVRRSRKPPPEGWELIEPTLDELDQKMREAETEPHEGKRKVEALWPIFKIHHQKSRYIFDLFYRRKAISRELYEYCLKEGIADKNLIAKWKKQGYENLCCLRCIQTRDTNFGTNCICRVPKSKLEEGRIVECVHCGCRGCS 143          
BLAST of FC875597 vs. ExPASy Swiss-Prot
Match: BUD31_XENLA (Protein BUD31 homolog OS=Xenopus laevis GN=bud31 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.679e-56
Identity = 94/143 (65.73%), Postives = 116/143 (81.12%), Query Frame = 2
Query:  143 MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPK-HLREEKHVECVHCGCKGCA 568
            MPKV+ +R   PDGWELI PTL E++ KMREAE DPH+GKRK E+LWPIF+I HQ+++YIF+L+YKR  IS+ELY++C+ +GY D NLIAKWKK GYE LCCLRCIQ RD NFGT C+CRVPK  L   + +EC HCGC+GC+
Sbjct:    1 MPKVKRSRKPPPDGWELIEPTLDELDQKMREAETDPHEGKRKVESLWPIFRIHHQKTRYIFDLFYKRKAISRELYDYCIREGYADKNLIAKWKKQGYENLCCLRCIQTRDTNFGTNCICRVPKTKLEVGRIIECTHCGCRGCS 143          
BLAST of FC875597 vs. ExPASy Swiss-Prot
Match: BUD31_RAT (Protein BUD31 homolog OS=Rattus norvegicus GN=Bud31 PE=2 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 1.679e-56
Identity = 94/143 (65.73%), Postives = 116/143 (81.12%), Query Frame = 2
Query:  143 MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPK-HLREEKHVECVHCGCKGCA 568
            MPKV+ +R   PDGWELI PTL E++ KMREAE +PH+GKRK E+LWPIF+I HQ+++YIF+L+YKR  IS+ELYE+C+ +GY D NLIAKWKK GYE LCCLRCIQ RD NFGT C+CRVPK  L   + +EC HCGC+GC+
Sbjct:    1 MPKVKRSRKAPPDGWELIEPTLDELDQKMREAETEPHEGKRKVESLWPIFRIHHQKTRYIFDLFYKRKAISRELYEYCIKEGYADKNLIAKWKKQGYENLCCLRCIQTRDTNFGTNCICRVPKSKLEVGRIIECTHCGCRGCS 143          
BLAST of FC875597 vs. ExPASy Swiss-Prot
Match: BUD31_HUMAN (Protein BUD31 homolog OS=Homo sapiens GN=BUD31 PE=1 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 1.679e-56
Identity = 94/143 (65.73%), Postives = 116/143 (81.12%), Query Frame = 2
Query:  143 MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPK-HLREEKHVECVHCGCKGCA 568
            MPKV+ +R   PDGWELI PTL E++ KMREAE +PH+GKRK E+LWPIF+I HQ+++YIF+L+YKR  IS+ELYE+C+ +GY D NLIAKWKK GYE LCCLRCIQ RD NFGT C+CRVPK  L   + +EC HCGC+GC+
Sbjct:    1 MPKVKRSRKAPPDGWELIEPTLDELDQKMREAETEPHEGKRKVESLWPIFRIHHQKTRYIFDLFYKRKAISRELYEYCIKEGYADKNLIAKWKKQGYENLCCLRCIQTRDTNFGTNCICRVPKSKLEVGRIIECTHCGCRGCS 143          
BLAST of FC875597 vs. ExPASy Swiss-Prot
Match: BUD31_GECJA (Protein BUD31 homolog OS=Gecko japonicus GN=BUD31 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.679e-56
Identity = 94/143 (65.73%), Postives = 116/143 (81.12%), Query Frame = 2
Query:  143 MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPK-HLREEKHVECVHCGCKGCA 568
            MPKV+ +R   PDGWELI PTL E++ KMREAE +PH+GKRK E+LWPIF+I HQ+++YIF+L+YKR  IS+ELYE+C+ +GY D NLIAKWKK GYE LCCLRCIQ RD NFGT C+CRVPK  L   + +EC HCGC+GC+
Sbjct:    1 MPKVKRSRKAPPDGWELIEPTLDELDQKMREAETEPHEGKRKVESLWPIFRIHHQKTRYIFDLFYKRKAISRELYEYCIKEGYADKNLIAKWKKQGYENLCCLRCIQTRDTNFGTNCICRVPKSKLEVGRIIECTHCGCRGCS 143          
BLAST of FC875597 vs. ExPASy Swiss-Prot
Match: BUD31_BOVIN (Protein BUD31 homolog OS=Bos taurus GN=BUD31 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.679e-56
Identity = 94/143 (65.73%), Postives = 116/143 (81.12%), Query Frame = 2
Query:  143 MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPK-HLREEKHVECVHCGCKGCA 568
            MPKV+ +R   PDGWELI PTL E++ KMREAE +PH+GKRK E+LWPIF+I HQ+++YIF+L+YKR  IS+ELYE+C+ +GY D NLIAKWKK GYE LCCLRCIQ RD NFGT C+CRVPK  L   + +EC HCGC+GC+
Sbjct:    1 MPKVKRSRKAPPDGWELIEPTLDELDQKMREAETEPHEGKRKVESLWPIFRIHHQKTRYIFDLFYKRKAISRELYEYCIKEGYADKNLIAKWKKQGYENLCCLRCIQTRDTNFGTNCICRVPKSKLEVGRIIECTHCGCRGCS 143          
BLAST of FC875597 vs. ExPASy Swiss-Prot
Match: BUD31_DANRE (Protein BUD31 homolog OS=Danio rerio GN=bud31 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 8.333e-56
Identity = 93/143 (65.03%), Postives = 115/143 (80.42%), Query Frame = 2
Query:  143 MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPK-HLREEKHVECVHCGCKGCA 568
            MPKV+ +R   PDGWEL+ PTL E++ KMREAE +PH+GKRK E+LWPIF++ HQRS+YIF+L+YKR  IS+ELY++C+  GY D NLIAKWKK GYE LCCLRCIQ RD NFGT C+CRVPK  L   + +EC HCGC+GC+
Sbjct:    1 MPKVKRSRKPPPDGWELVEPTLDELDQKMREAETEPHEGKRKVESLWPIFRLHHQRSRYIFDLFYKRKAISRELYKYCIRGGYADKNLIAKWKKQGYENLCCLRCIQTRDTNFGTNCICRVPKGKLEVGRIIECTHCGCRGCS 143          
The following BLAST results are available for this feature:
BLAST of FC875597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
BD31B_ORYSJ1.236e-7582.76Protein BUD31 homolog 2 OS=Oryza sativa subsp. jap... [more]
BD31A_ORYSJ6.137e-7582.76Protein BUD31 homolog 1 OS=Oryza sativa subsp. jap... [more]
BD31C_ORYSJ6.350e-7280.00Protein BUD31 homolog 3 OS=Oryza sativa subsp. jap... [more]
BUD31_BRABE2.590e-5768.53Protein BUD31 homolog OS=Branchiostoma belcheri PE... [more]
BUD31_XENLA1.679e-5665.73Protein BUD31 homolog OS=Xenopus laevis GN=bud31 P... [more]
BUD31_RAT1.679e-5665.73Protein BUD31 homolog OS=Rattus norvegicus GN=Bud3... [more]
BUD31_HUMAN1.679e-5665.73Protein BUD31 homolog OS=Homo sapiens GN=BUD31 PE=... [more]
BUD31_GECJA1.679e-5665.73Protein BUD31 homolog OS=Gecko japonicus GN=BUD31 ... [more]
BUD31_BOVIN1.679e-5665.73Protein BUD31 homolog OS=Bos taurus GN=BUD31 PE=2 ... [more]
BUD31_DANRE8.333e-5665.03Protein BUD31 homolog OS=Danio rerio GN=bud31 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionC31405F11EF CTVClemen1 Citrus clementina cDNA clone C31405F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875597 ID=FC875597; Name=FC875597; organism=Citrus clementina; type=EST; length=690bp
GGCAGCTCATTCTTCACATCGACACTAGCAAGAAGCAAAAGGGCAAATCG
AGCAACAAATCGGTTGGAGGAGGCTCTTGAAACTCTGTGCCTTTTAGCCT
GCAGATTCAGTCGGTTGATTTGATCAAGCTACAGGTTGCAAAATGCCTAA
AGTGAGGACAAACCGTACCAAGTATCCAGATGGGTGGGAGTTGATTGCGC
CTACGCTTCGTGAGATGGAGGCTAAGATGAGAGAAGCTGAAAATGATCCA
CATGATGGCAAGAGAAAGTGTGAAACACTGTGGCCCATCTTCAAAATTGC
GCATCAGAGGAGCCAGTACATATTTGAGCTTTATTACAAAAGGAATGAGA
TTTCCAAGGAATTGTACGAGTTCTGCTTGGATCAAGGATATGGTGACAGC
AACTTAATCGCTAAGTGGAAAAAGCCCGGATATGAACGACTCTGCTGCCT
ACGATGCATACAGCCAAGGGATCACAACTTTGGCACAACATGTGTGTGCA
GAGTTCCTAAGCACCTGAGGGAAGAGAAACATGTTGAGTGTGTGCATTGT
GGCTGTAAGGGCTGCGCAAGTGGGGATTAATTTGAGTACTTTGTCTAGCT
TTCTTTTTTGCATTCGATGTAGCTTAACTCTTGGAGGACTGATAGTATCG
ACAATCAGTTGAGCAAAAAAAAAAAAAAAAAAAAAAAAAA
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