FC875612
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875612 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.954e-34 Identity = 86/192 (44.79%), Postives = 104/192 (54.17%), Query Frame = 2 Query: 143 MCGGAIISGYVPPTVPGRPKKLTAEYLWPELK-------RSSNKKYSKPIVDDDFEADFQGFKXXXXXXXXXXXXXXXXXXXXXXXKPFTFSAGRK----------------SHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVTF 649 MCGGAIIS ++PP R ++T E++WP+LK + SNK+ +DDDFEADFQGFK KPF F+A K ++ V+ EQA+KS++RKRKNQYRGIRQRPWGKWAAEIRDP KG R WLGTF+T IRG KAKV F Sbjct: 1 MCGGAIISDFIPPP---RSLRVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFKDDSAFDCEDDDDVFVNV------KPFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNF 183
BLAST of FC875612 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.119e-32 Identity = 84/186 (45.16%), Postives = 103/186 (55.38%), Query Frame = 2 Query: 143 MCGGAIISGYVPPTVPGRPKKLTAEYLWPELKRS--SNKKYSKPI-----VDDDFEADFQGFKXXXXXXXXXXXXXXXXXXXXXXXKPFTFSAGRK------SHGSTAVKHVE----QAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVTF 649 MCGGAIIS ++PP R +++T+E++WP+LK++ +KK SK D +FEADFQGFK KPF F++ K + GS K V A+KS RKRKNQYRGIRQRPWGKWAAEIRDP +G R+WLGTF T IRG KAKV F Sbjct: 1 MCGGAIISDFIPPP---RSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFKDDSSIDCDDDFDVGDVFADV---KPFVFTSTPKPAVSAAAEGSVFGKKVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNF 180
BLAST of FC875612 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.300e-25 Identity = 73/180 (40.56%), Postives = 90/180 (50.00%), Query Frame = 2 Query: 143 MCGGAIISGYVPPTVPGRP---KKLTAEYLWPELKR----SSNKKYSKPIV---DDDFEADFQGFKXXXXXXXXXXXXXXXXXXXXXXXKPFTFSAGRKSHGSTAVKHVE-QAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVTF 649 MCGGAII + G P ++ T LWPE K+ +++ V D+DFEADF+ F+ F + R + + + A KS +RKRKNQ+RGIRQRPWGKWAAEIRDP KGVRVWLGTFN+ IRGKKAKV F Sbjct: 1 MCGGAIIHH-----LKGHPEGSRRATEGLLWPEKKKPRWGGGGRRHFGGFVEEDDEDFEADFEEFEVDSGDSDLELGEEDDDDVVEIKPAAFKRALSRDNLSTITTAGFDGPAAKSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNF 175
BLAST of FC875612 vs. ExPASy Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 5.333e-24 Identity = 69/169 (40.83%), Postives = 79/169 (46.75%), Query Frame = 2 Query: 143 MCGGAIISGYVPPTVPGRPKKLTAEYLWPELKRSSNKKYSKPIVDDDFEADFQGFKXXXXXXXXXXXXXXXXXXXXXXXKPFTFSAGRKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVTF 649 MCGGAIIS Y P + +KLTAE LW EL S+ DDF + K + + AVK + + RKRKN YRGIR+RPWGKWAAEIRDP KGVRVWLGTFNT IRG KAK+ F Sbjct: 1 MCGGAIISDYAPLVTKAKGRKLTAEELWSELDASAA---------DDFWGFYSTSKLHP--------------------------TNQVNVKEEAVKKEQATEPGKRRKRKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNF 134
BLAST of FC875612 vs. ExPASy Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17 Identity = 41/67 (61.19%), Postives = 48/67 (71.64%), Query Frame = 2 Query: 449 KKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVTF 649 ++ +R+RKN YRGIRQRPWGKWAAEIRDP+KGVRVWLGTF T IRG+KAK+ F Sbjct: 39 ERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNF 105
BLAST of FC875612 vs. ExPASy Swiss-Prot
Match: ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana GN=ERF073 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.525e-15 Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 2 Query: 461 ERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVTF 649 ++K+ ++Y+GIR+RPWG+WAAEIRDP KGVRVWLGTFNT IRG KAK+ F Sbjct: 18 KKKQSSRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNF 80
BLAST of FC875612 vs. ExPASy Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.317e-14 Identity = 41/88 (46.59%), Postives = 50/88 (56.82%), Query Frame = 2 Query: 389 TFSAGRKSHGSTAVKHVEQAKKSTERK-RKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVTF 649 T S+ R+ S K E K +RK +KN YRG+RQRPWGK+AAEIRDP + RVWLGTF T RG +AK+ F Sbjct: 104 TSSSNRRRESSPVAKKAEGGGKIRKRKNKKNGYRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNF 191
BLAST of FC875612 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.246e-14 Identity = 39/89 (43.82%), Postives = 51/89 (57.30%), Query Frame = 2 Query: 383 PFTFSAGRKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVTF 649 P +F+ SH + + +A R++K +YRG+RQRPWGKWAAEIRDP + RVWLGTF+T RG KAK+ F Sbjct: 45 PSSFARVDSSHNPIE-ESMSKAFPEEAREKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNF 132
BLAST of FC875612 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 5.003e-14 Identity = 41/78 (52.56%), Postives = 45/78 (57.69%), Query Frame = 2 Query: 416 GSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVTF 649 GS K E + S ER +K YRG+RQRPWGKWAAEIRDP K RVWLGTF T RG KAK+ F Sbjct: 42 GSAVTKECESSM-SLERPKK--YRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNF 116
BLAST of FC875612 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.115e-13 Identity = 34/70 (48.57%), Postives = 42/70 (60.00%), Query Frame = 2 Query: 440 EQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVTF 649 +Q + ++ R+ YRG+RQRPWGKWAAEIRDP K RVWLGTF T +G KAK+ F Sbjct: 25 DQHQPDQDQPRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNF 94 The following BLAST results are available for this feature:
BLAST of FC875612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875612 ID=FC875612; Name=FC875612; organism=Citrus clementina; type=EST; length=722bpback to top |