FC875615

Overview
NameFC875615
Unique NameFC875615
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10279 contig Ccv1_Contig10279:1..722. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC875615 vs. ExPASy Swiss-Prot
Match: WUN1_SOLTU (Wound-induced protein 1 OS=Solanum tuberosum GN=WUN1 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.711e-28
Identity = 66/107 (61.68%), Postives = 75/107 (70.09%), Query Frame = 3 
Query:  330 FVFVPLSITSFGPIVLAEGCDHSRQISWVHAWTVADGIITQVREYFNTSLTVTRFGKDLSGQSQRKKSPPSDFPSTAEINPVHCPSVWESSVXHRDGKSVPGLVLAL 650
            F F+  +I  FG +VL EGCD +R I+WVHAWTV DG+ITQVREYFNTSLTVTRFGK             SD  S   I  +HCPSVWESS+ +R GKSVPGLVLAL
Sbjct:   15 FQFLHKTIDVFGSVVLVEGCDPTRSITWVHAWTVTDGVITQVREYFNTSLTVTRFGK-------------SDISS---ITTLHCPSVWESSLPNRVGKSVPGLVLAL 105
The following BLAST results are available for this feature:
BLAST of FC875615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WUN1_SOLTU2.711e-2861.68Wound-induced protein 1 OS=Solanum tuberosum GN=WU... [more]
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Properties
Property NameValue
Genbank descriptionC31405H07EF CTVClemen1 Citrus clementina cDNA clone C31405H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875615 ID=FC875615; Name=FC875615; organism=Citrus clementina; type=EST; length=721bp
ATCACCAGTTCTCTCTGGTAACCCTTATCCAGAATCACAAAACAAATTCA
TTTCATTTCCAGTTTCTCTGCTTTTGTTGTTTCCATTTGTCAAGGCTATT
CCGTCAAGAACTGGCTAACTCTCAGCAGAAAAATCCGGAAGACTCCGAAA
ACAAGAACCAGCGCGTGGTTCTTGCTCTGTATGATGCCTTAAAATCTCGA
GACGTTGAAACGGTACACAAGATCCTAGCCCCGGACCTAGAGTGGTGGTT
CCATGGCCCGCCGACCCACCAGTTTATGATGCACCTTCTCACCGGCAGCA
CCACCGCATCGTCAGCATCGCAAAGCTCCTTCGTATTCGTTCCTCTCTCG
ATCACATCGTTCGGGCCCATTGTCCTCGCCGAGGGCTGTGATCACAGCCG
TCAAATCAGCTGGGTCCACGCCTGGACGGTCGCTGATGGGATAATTACTC
AAGTCAGAGAATACTTCAACACTTCGCTTACCGTCACCCGCTTCGGTAAA
GACTTGTCTGGTCAAAGTCAGAGGAAGAAATCACCACCCTCTGATTTCCC
ATCAACAGCGGAGATTAATCCGGTGCATTGCCCCTCCGTTTGGGAGAGCA
GCGTCNTCCACCGGGACGGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTC
TAAAGCAACCAAAAAGGGACCGAGGTTGATCCTGTGCAGCCGTGTGTAGT
ATATATTATACATATTACATA
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