FC875617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875617 vs. ExPASy Swiss-Prot
Match: CP058_PONAB (UPF0420 protein C16orf58 homolog OS=Pongo abelii PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.319e-12 Identity = 33/86 (38.37%), Postives = 51/86 (59.30%), Query Frame = 1 Query: 394 SPQAPAEELMSFIRSYAVPDGFPDSVTPSYVPYMTWRALKHFFGGAMGVFTTQTLLNSVGVSRNRATPGAVAINWILKDGAGRVGK 651 +P AP+ L S +++ +P GFPDSV+P Y+PY W +++ F G G TQ +L +GV +AT A W++KD G +G+ Sbjct: 62 APGAPSPPL-SGLQAVFLPQGFPDSVSPDYLPYQLWDSVQAFASGLSGSLATQAVLLGIGVGNAKATVSAATATWLVKDSTGMLGR 146
BLAST of FC875617 vs. ExPASy Swiss-Prot
Match: CP058_MOUSE (UPF0420 protein C16orf58 homolog OS=Mus musculus PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.963e-11 Identity = 29/77 (37.66%), Postives = 45/77 (58.44%), Query Frame = 1 Query: 421 MSFIRSYAVPDGFPDSVTPSYVPYMTWRALKHFFGGAMGVFTTQTLLNSVGVSRNRATPGAVAINWILKDGAGRVGK 651 +S +RS +P GFPDSV+P Y+PY W +++ F G TQ +L +GV +A+ A W++KD G +G+ Sbjct: 68 LSGLRSVLLPQGFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLQGLGVGNAKASVSAATSTWLVKDSTGMLGR 144
BLAST of FC875617 vs. ExPASy Swiss-Prot
Match: CP058_HUMAN (UPF0420 protein C16orf58 OS=Homo sapiens GN=C16orf58 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 5.713e-11 Identity = 28/77 (36.36%), Postives = 45/77 (58.44%), Query Frame = 1 Query: 421 MSFIRSYAVPDGFPDSVTPSYVPYMTWRALKHFFGGAMGVFTTQTLLNSVGVSRNRATPGAVAINWILKDGAGRVGK 651 +S +++ +P GFPDSV+P Y+PY W +++ F G TQ +L +GV +AT A W++KD G +G+ Sbjct: 70 LSGLQAVFLPQGFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLLGIGVGNAKATVSAATATWLVKDSTGMLGR 146
BLAST of FC875617 vs. ExPASy Swiss-Prot
Match: CP058_RAT (UPF0420 protein C16orf58 homolog OS=Rattus norvegicus PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.461e-11 Identity = 46/139 (33.09%), Postives = 67/139 (48.20%), Query Frame = 1 Query: 253 LVEDQFVDSSLRLICSEDIDGR-RWNYVAERDRSGKFKRNSIRAISL-----QSPQAPAEELMSFIRSYAVPDGFPDSVTPSYVPYMTWRALKHFFGGAMGVFTTQTLLNSVGVSRNRATPGAVAINWILKDGAGRVGK 651 L +QF + R CS DG +W+ R G F R SI + P A A +S +RS +P GFPDSV+P Y+ Y W +++ F G TQ +L +GV +A+ A W++KD G +G+ Sbjct: 11 LCTEQFGSGAPRS-CSAAADGSLQWD---RAQRWGWFSRASITKPGQHEGGGRGPWA-ALTTLSGLRSVLLPQGFPDSVSPDYLQYQLWDSVQAFASSLSGSLATQAVLQGLGVGNAKASVSAATSTWLVKDSTGMLGR 144 The following BLAST results are available for this feature:
BLAST of FC875617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875617 ID=FC875617; Name=FC875617; organism=Citrus clementina; type=EST; length=659bpback to top |