FC875619

Overview
NameFC875619
Unique NameFC875619
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: SIRT4_BOVIN (NAD-dependent ADP-ribosyltransferase sirtuin-4 OS=Bos taurus GN=SIRT4 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.188e-23
Identity = 61/148 (41.22%), Postives = 88/148 (59.46%), Query Frame = 2
Query:  284 PDADPPSIEDINQFA----KLIVLTGAGISTECGIPDYRSPN-GAYS-SGFKPITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGSNPL-ELHGTVYTVVCLDCGFSFCRDLFQDQ 706
            P  DP  ++++ +F     +L+V+TGAGISTE GIPDYRS   G Y+ +  +PI H  F                    F + QPNPAH+AL++ E+ G++  ++TQNVD LH +AGS  L ELHG ++ V+CLDCG    R + Q++
Sbjct:   38 PPLDPEKVKELQRFITLSKRLLVMTGAGISTESGIPDYRSEKVGLYARTDRRPIQHGDFVRSAPVRQRYWARNFVGWPQFSSRQPNPAHWALSNWERLGKLHWLVTQNVDALHTKAGSQRLTELHGCMHRVLCLDCGEQTPRGVLQER 185          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: SIRT4_HUMAN (NAD-dependent ADP-ribosyltransferase sirtuin-4 OS=Homo sapiens GN=SIRT4 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.647e-23
Identity = 63/150 (42.00%), Postives = 88/150 (58.67%), Query Frame = 2
Query:  278 AVPDADPPSIEDINQFA----KLIVLTGAGISTECGIPDYRSPN-GAYS-SGFKPITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGSNPL-ELHGTVYTVVCLDCGFSFCRDLFQDQ 706
            A P  DP  ++++ +F     +L+V+TGAGISTE GIPDYRS   G Y+ +  +PI H  F                    F + QPNPAH+AL++ EK G++  ++TQNVD LH +AGS  L ELHG +  V+CLDCG    R + Q++
Sbjct:   35 ASPPLDPEKVKELQRFITLSKRLLVMTGAGISTESGIPDYRSEKVGLYARTDRRPIQHGDFVRSAPIRQRYWARNFVGWPQFSSHQPNPAHWALSTWEKLGKLYWLVTQNVDALHTKAGSRRLTELHGCMDRVLCLDCGEQTPRGVLQER 184          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: SIRT4_MOUSE (NAD-dependent ADP-ribosyltransferase sirtuin-4 OS=Mus musculus GN=Sirt4 PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 5.896e-23
Identity = 61/148 (41.22%), Postives = 87/148 (58.78%), Query Frame = 2
Query:  284 PDADPPSIEDINQFA----KLIVLTGAGISTECGIPDYRSPN-GAYS-SGFKPITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGSNPL-ELHGTVYTVVCLDCGFSFCRDLFQDQ 706
            P  DP  I+++ +F     KL+V+TGAGISTE  IPDYRS   G Y+ +  +PI H  F                    F + QPNPAH+AL++ E+ G++  ++TQNVD LH +AGS  L ELHG ++ V+CL+CG    R + Q++
Sbjct:   34 PPLDPEKIKELQRFISLSKKLLVMTGAGISTESSIPDYRSEKVGLYARTDRRPIQHIDFVRSAPVRQRYWARNFVGWPQFSSHQPNPAHWALSNWERLGKLHWLVTQNVDALHSKAGSQRLTELHGCMHRVLCLNCGEQTARRVLQER 181          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD1_COREF (NAD-dependent deacetylase 1 OS=Corynebacterium efficiens GN=npdA1 PE=3 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 6.519e-22
Identity = 54/122 (44.26%), Postives = 74/122 (60.66%), Query Frame = 2
Query:  332 LIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHGTVYTVVCLDCGFSFCRDL 694
            ++ +TGAG+ST+ GIPDYRSP G+ + G +P+T+Q+F                       AQPN  H+AL  LE+AG +  ++TQNVD LH RAGS N + LHG + T+VCL CG    R+L
Sbjct:   19 VLAVTGAGVSTDSGIPDYRSPRGSLNQG-RPMTYQEFRFDPVASHRYWARSFVGWRVMADAQPNRTHYALVELERAGLLSGIVTQNVDGLHRRAGSENLVALHGDLATIVCLQCGHREAREL 139          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD_XANAC (NAD-dependent deacetylase OS=Xanthomonas axonopodis pv. citri GN=npdA PE=3 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.359e-19
Identity = 58/143 (40.56%), Postives = 77/143 (53.85%), Query Frame = 2
Query:  278 AVPDADPPSIED-INQFAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGSNP-LELHGTVYTVVCLDCGFSFCRDLFQ 700
            AVP  D  +++D I +  +L VLTGAG ST+ GIPDYR   G +    +P+T Q F                    F  AQPN  H ALA+LE  G+++ ++TQNVDRLH  AGS   ++LHG +  V C+ C     R  FQ
Sbjct:    3 AVPAHDHHTLQDFIERHQRLFVLTGAGCSTDSGIPDYRDLQGGWKRP-QPVTFQAFMGELSTRQRYWARSLVGWPRFGLAQPNATHHALAALEARGQLEVLLTQNVDRLHQAAGSQAVIDLHGRLDVVRCMGCERRMPRTEFQ 144          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD_THEYD (NAD-dependent deacetylase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=npdA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.503e-18
Identity = 50/113 (44.25%), Postives = 66/113 (58.41%), Query Frame = 2
Query:  335 IVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHGTVYTVVCLDC 670
            +  TGAGISTE GIPD+RSPNG +   F+ +T+Q+F                     + A+PN AH ALA LEK G +  +ITQN+D LH  AG+ + +ELHG     +CLDC
Sbjct:   23 VAFTGAGISTESGIPDFRSPNGLWQR-FRIVTYQEFIIDRKARNEFWKMKRELIQEIINAKPNNAHNALAELEKRGLLKYVITQNIDGLHQMAGNKSVIELHGNQRGYICLDC 134          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD_XANCB (NAD-dependent deacetylase OS=Xanthomonas campestris pv. campestris (strain B100) GN=npdA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.564e-18
Identity = 54/142 (38.03%), Postives = 74/142 (52.11%), Query Frame = 2
Query:  278 AVPDADPPSIEDINQFAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGSNP-LELHGTVYTVVCLDCGFSFCRDLFQ 700
            A+    P   E I +  +L VL+GAG ST+ GIPDYR  +G +    +P+T Q F                    F  A+PN  H ALA+LE  G+++ ++TQNVDRLH  AGS   ++LHG +  V C+ C     R  FQ
Sbjct:    4 AITQTGPALQEFIKRHQRLFVLSGAGCSTDSGIPDYRDLHGGWKRP-QPVTFQAFMGELSTRQRYWARSLVGWPRFGLARPNATHHALAALEARGQLELLLTQNVDRLHQAAGSQAVIDLHGRLDVVRCMGCEQRMPRTEFQ 144          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD_XANCP (NAD-dependent deacetylase OS=Xanthomonas campestris pv. campestris GN=npdA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.373e-18
Identity = 53/142 (37.32%), Postives = 73/142 (51.41%), Query Frame = 2
Query:  278 AVPDADPPSIEDINQFAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGSNP-LELHGTVYTVVCLDCGFSFCRDLFQ 700
            A+    P   E + +  +L VL+GAG ST+ GIPDYR   G +    +P+T Q F                    F  A+PN  H ALA+LE  G+++ ++TQNVDRLH  AGS   ++LHG +  V C+ C     R  FQ
Sbjct:    4 AITQTGPALQEFVERHQRLFVLSGAGCSTDSGIPDYRDLQGGWKRP-QPVTFQAFMGELSTRQRYWARSLVGWPRFGLARPNATHHALAALEARGQLELLLTQNVDRLHQAAGSQAVIDLHGRLDVVRCMGCEQRMPRTEFQ 144          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD_XANC8 (NAD-dependent deacetylase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=npdA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.373e-18
Identity = 53/142 (37.32%), Postives = 73/142 (51.41%), Query Frame = 2
Query:  278 AVPDADPPSIEDINQFAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGSNP-LELHGTVYTVVCLDCGFSFCRDLFQ 700
            A+    P   E + +  +L VL+GAG ST+ GIPDYR   G +    +P+T Q F                    F  A+PN  H ALA+LE  G+++ ++TQNVDRLH  AGS   ++LHG +  V C+ C     R  FQ
Sbjct:    4 AITQTGPALQEFVERHQRLFVLSGAGCSTDSGIPDYRDLQGGWKRP-QPVTFQAFMGELSTRQRYWARSLVGWPRFGLARPNATHHALAALEARGQLELLLTQNVDRLHQAAGSQAVIDLHGRLDVVRCMGCEQRMPRTEFQ 144          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD2_BRAJA (NAD-dependent deacetylase 2 OS=Bradyrhizobium japonicum GN=npdA2 PE=3 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 7.459e-18
Identity = 55/136 (40.44%), Postives = 71/136 (52.21%), Query Frame = 2
Query:  302 SIED-INQFAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGSNP-LELHGTVYTVVCLDCGFSFCRDLFQD 703
            S++D + +  +L VLTGAG ST  GIPDYR  +G +    +P+  Q F                    F  A+PN AH ALA LE  GR   ++TQNVDRLH  AG    ++LHG +  V C+ CG    R  FQD
Sbjct:   10 SLQDFVARHQRLFVLTGAGCSTNSGIPDYRDSHGNWKRT-QPVNFQAFMSEEHTRRRYWARSLIGWRRFGQARPNDAHHALARLEANGRCGMLLTQNVDRLHQSAGHRQVIDLHGRLDLVRCMGCGAKTPRSEFQD 144          
The following BLAST results are available for this feature:
BLAST of FC875619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
SIRT4_BOVIN1.188e-2341.22NAD-dependent ADP-ribosyltransferase sirtuin-4 OS=... [more]
SIRT4_HUMAN2.647e-2342.00NAD-dependent ADP-ribosyltransferase sirtuin-4 OS=... [more]
SIRT4_MOUSE5.896e-2341.22NAD-dependent ADP-ribosyltransferase sirtuin-4 OS=... [more]
NPD1_COREF6.519e-2244.26NAD-dependent deacetylase 1 OS=Corynebacterium eff... [more]
NPD_XANAC1.359e-1940.56NAD-dependent deacetylase OS=Xanthomonas axonopodi... [more]
NPD_THEYD1.503e-1844.25NAD-dependent deacetylase OS=Thermodesulfovibrio y... [more]
NPD_XANCB2.564e-1838.03NAD-dependent deacetylase OS=Xanthomonas campestri... [more]
NPD_XANCP4.373e-1837.32NAD-dependent deacetylase OS=Xanthomonas campestri... [more]
NPD_XANC84.373e-1837.32NAD-dependent deacetylase OS=Xanthomonas campestri... [more]
NPD2_BRAJA7.459e-1840.44NAD-dependent deacetylase 2 OS=Bradyrhizobium japo... [more]

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Properties
Property NameValue
Genbank descriptionC31405H11EF CTVClemen1 Citrus clementina cDNA clone C31405H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875619 ID=FC875619; Name=FC875619; organism=Citrus clementina; type=EST; length=721bp
GAAGGAAATTCATCAAAAGAATACAACTATGCTTCTGCGTTTGCCTTTTT
TCTCTGCTTCGAGAAATTCTTCTGGAATGCTTGCGAGGGTTAAGTCAGAA
ATTGTTCAATCAAGTATCAAAGCACAGCAATTGCTGAGCAAAGGAAGAAG
GGTATTCCCTCTTCAGGGTTCTGTAAAGTTTGTACAAACATCATGCCGAA
TGTCAATTCCTGGGTTACCATCATCAAGACATGAAGACAAGGCACCTGCA
TCTCCTAAAGTTTTGAGGGACAAGAAGGCAGTTCCTGATGCAGACCCTCC
AAGCATTGAAGACATCAATCAATTTGCCAAGCTCATTGTATTGACAGGAG
CTGGAATTAGCACAGAATGTGGAATTCCTGATTATAGAAGTCCGAATGGA
GCTTACAGTTCTGGATTTAAACCAATTACCCATCAGCAATTTTTTCGTTC
AAGTCGAGCTCGTAGACGGTATTGGGCTAGAAGCTATGCTGGATGGAGAC
GGTTTATGGCAGCACAGCCTAATCCAGCTCATTTTGCTTTAGCATCTCTT
GAAAAAGCTGGGAGGATAGATTGTATGATTACTCAAAATGTCGACAGATT
ACATCATCGTGCAGGGAGCAATCCACTCGAATTACATGGGACTGTATATA
CTGTTGTTTGTTTAGATTGTGGTTTTTCCTTTTGTCGGGATTTGTTTCAA
GACCAGTGAAAGCCCTTAATC
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