FC875621
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875621 vs. ExPASy Swiss-Prot
Match: QORH_SPIOL (Quinone-oxidoreductase homolog, chloroplastic OS=Spinacia oleracea GN=QOR PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 7.172e-59 Identity = 84/122 (68.85%), Postives = 93/122 (76.23%), Query Frame = 3
Query: 297 LPRKFPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVTRPPEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 662
LPRKFP IP TD FK GDKVVA L++ GG LAE+AVAKE+ TV RPPEVSAAEG+ LPVA LTAHQALTQ A +KLDGSG++KNIL+TAASGGVGHYAVQLAKLGN
Sbjct: 61 LPRKFPTIPGTDVAGEVVQAGSAVNRFKTGDKVVAVLSH--ATGGALAEYAVAKENLTVARPPEVSAAEGAALPVAALTAHQALTQFANIKLDGSGERKNILITAASGGVGHYAVQLAKLGN 180 HSP 2 Score: 87.8113 bits (216), Expect = 7.172e-59 Identity = 40/60 (66.67%), Postives = 48/60 (80.00%), Query Frame = 2
Query: 113 MAGKPLMHAVQYNSYGGGAADLKHVELSVPTPSKDEVLLKLEATALNPVDWKVQKGQLRP 292
MA K LMHA+QY+ YGGG LKHVE++VP P DE+LLK+EA LNP+DWK+QKG LRP
Sbjct: 1 MAAK-LMHAIQYSGYGGGTDALKHVEVAVPDPKSDELLLKIEAATLNPIDWKIQKGVLRP 59 HSP 3 Score: 22.3274 bits (46), Expect = 7.172e-59 Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 2
Query: 665 HVTASCGAR 691
HVTA+CGAR
Sbjct: 182 HVTATCGAR 190
BLAST of FC875621 vs. ExPASy Swiss-Prot
Match: QORH_ARATH (Putative quinone-oxidoreductase homolog, chloroplastic OS=Arabidopsis thaliana GN=At4g13010 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 8.550e-39 Identity = 90/146 (61.64%), Postives = 101/146 (69.18%), Query Frame = 3
Query: 225 CLNLKQPL*IRLTGKSRRASYALFLPRKFPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVTRPPEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 662
CL L+ + K ++ FLPRKFPCIPATD K FKAGDKVVA L++L GGGLAEFAVA E TV RP EV AAE + LPVAGLTA QALT AG+KLDG+G++ NILVTAASGGVGHYAVQLAKL N
Sbjct: 37 CLKLEATSLNPVDWKIQKGMIRPFLPRKFPCIPATDVAGEVVEVGSGVKNFKAGDKVVAVLSHL--GGGGLAEFAVATEKLTVKRPQEVGAAEAAALPVAGLTALQALTNPAGLKLDGTGKKANILVTAASGGVGHYAVQLAKLAN 180 HSP 2 Score: 22.3274 bits (46), Expect = 8.550e-39 Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 2
Query: 665 HVTASCGAR 691
HVTA+CGAR
Sbjct: 182 HVTATCGAR 190 HSP 3 Score: 98.9821 bits (245), Expect = 2.576e-20 Identity = 46/61 (75.41%), Postives = 54/61 (88.52%), Query Frame = 2
Query: 113 MAGKPLMHAVQYNSYGGGAADLKHVELSVPTPSKDEVLLKLEATALNPVDWKVQKGQLRPF 295
MAGK LMHA+QYNSYGGGAA L+HV++ VPTP +EV LKLEAT+LNPVDWK+QKG +RPF
Sbjct: 1 MAGK-LMHALQYNSYGGGAAGLEHVQVPVPTPKSNEVCLKLEATSLNPVDWKIQKGMIRPF 60
BLAST of FC875621 vs. ExPASy Swiss-Prot
Match: QOR_LAMGU (Quinone oxidoreductase OS=Lama guanicoe GN=CRYZ PE=2 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 6.095e-13 Identity = 37/116 (31.90%), Postives = 54/116 (46.55%), Query Frame = 3
Query: 306 KFPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVTRPPEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAK 653
+ P P D FK GD+V T GG AE+A+A + + P E+ +G+ + V TA++AL SA K +++LV ASGGVG A Q+A+
Sbjct: 64 RLPYTPGLDVAGLIEAVGERVSAFKKGDRVFT----TSTVSGGYAEYALAADHTVYKLPGELDFQKGAAIGVPYFTAYRALLHSACAKAG-----ESVLVHGASGGVGLAACQIAR 170 HSP 2 Score: 42.3578 bits (98), Expect = 6.095e-13 Identity = 18/54 (33.33%), Postives = 34/54 (62.96%), Query Frame = 2
Query: 119 GKPLMHAVQYNSYGGGAADLKHVELSVPTPSKDEVLLKLEATALNPVDWKVQKG 280
G+ LM A++ + +GG +++VP P + +VL+K++A +NPVD ++ G
Sbjct: 4 GQRLMRAIRVSEFGGPEVLKLQSDVAVPIPEEHQVLIKVQACGVNPVDTYIRSG 57
BLAST of FC875621 vs. ExPASy Swiss-Prot
Match: QOR_BOVIN (Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2) HSP 1 Score: 53.1434 bits (126), Expect = 1.335e-12 Identity = 37/114 (32.46%), Postives = 55/114 (48.25%), Query Frame = 3
Query: 312 PCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVTRPPEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAK 653
P P D FK GD+V T GG AE+A+A + + T P ++ +G+ + + TA++AL SA VK +++LV ASGGVG A Q+A+
Sbjct: 66 PYTPGFDVAGIIEAVGESVSAFKKGDRVFTTR----TISGGYAEYALAADHTVYTLPEKLDFKQGAAIGIPYFTAYRALLHSACVK-----PGESVLVHGASGGVGIAACQIAR 170 HSP 2 Score: 40.4318 bits (93), Expect = 1.335e-12 Identity = 18/54 (33.33%), Postives = 32/54 (59.26%), Query Frame = 2
Query: 119 GKPLMHAVQYNSYGGGAADLKHVELSVPTPSKDEVLLKLEATALNPVDWKVQKG 280
G+ LM A++ +GG +++VP P +VL+K++A +NPVD ++ G
Sbjct: 4 GQKLMRAIRVFEFGGPEVLKLQSDVAVPIPKDHQVLIKVQACGVNPVDTYIRSG 57
BLAST of FC875621 vs. ExPASy Swiss-Prot
Match: QORL_ARATH (Quinone oxidoreductase-like protein At1g23740, chloroplastic OS=Arabidopsis thaliana GN=At1g23740 PE=1 SV=2) HSP 1 Score: 53.1434 bits (126), Expect = 2.909e-12 Identity = 39/121 (32.23%), Postives = 55/121 (45.45%), Query Frame = 3
Query: 312 PCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNG----GGLAEFAVAKESSTVTRPPEVSAAEGSGLPVAGLTAHQALTQ---SAGVKLDGSGQQKNILVTAASGGVGHYAVQLAK 653
P +P D K K GD+V A ++ G G LAE+ +E +P + A+ +GLP+A TA + L + SAG K+ILV +GGVG +QLAK
Sbjct: 137 PTVPGYDVAGVVVKVGSAVKDLKEGDEVYANVSEKALEGPKQFGSLAEYTAVEEKLLALKPKNIDFAQAAGLPLAIETADEGLVRTEFSAG---------KSILVLNGAGGVGSLVIQLAK 248 HSP 2 Score: 39.2762 bits (90), Expect = 2.909e-12 Identity = 21/53 (39.62%), Postives = 31/53 (58.49%), Query Frame = 2
Query: 131 MHAVQYNSYGGGAADLKHVELSVPTPSKDEVLLKLEATALNPVDWKVQKGQLR 289
M A Y+ YGG + VP +D+VL+K+ A ALNPVD K ++G+ +
Sbjct: 78 MKAWVYSDYGGVDVLKLESNIVVPEIKEDQVLIKVVAAALNPVDAKRRQGKFK 130
BLAST of FC875621 vs. ExPASy Swiss-Prot
Match: QOR_HUMAN (Quinone oxidoreductase OS=Homo sapiens GN=CRYZ PE=1 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 6.402e-12 Identity = 36/114 (31.58%), Postives = 55/114 (48.25%), Query Frame = 3
Query: 312 PCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVTRPPEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAK 653
P P +D FK GD+V T GG AE+A+A + + P ++ +G+ + + TA++AL SA VK +++LV ASGGVG A Q+A+
Sbjct: 66 PYTPGSDVAGVIEAVGDNASAFKKGDRVFTSS----TISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAG-----ESVLVHGASGGVGLAACQIAR 170 HSP 2 Score: 38.891 bits (89), Expect = 6.402e-12 Identity = 18/54 (33.33%), Postives = 31/54 (57.41%), Query Frame = 2
Query: 119 GKPLMHAVQYNSYGGGAADLKHVELSVPTPSKDEVLLKLEATALNPVDWKVQKG 280
G+ LM AV+ +GG +++VP P +VL+K+ A +NPV+ ++ G
Sbjct: 4 GQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSG 57
BLAST of FC875621 vs. ExPASy Swiss-Prot
Match: QOR_PONAB (Quinone oxidoreductase OS=Pongo abelii GN=CRYZ PE=2 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 1.401e-11 Identity = 36/114 (31.58%), Postives = 55/114 (48.25%), Query Frame = 3
Query: 312 PCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVTRPPEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAK 653
P P +D FK GD+V T GG AE+A+A + + P ++ +G+ + + TA++AL SA VK +++LV ASGGVG A Q+A+
Sbjct: 66 PYTPGSDVAGVIEAVGGNASAFKKGDRVFTSS----TISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSAHVKAG-----ESVLVHGASGGVGLAACQIAR 170 HSP 2 Score: 37.3502 bits (85), Expect = 1.401e-11 Identity = 17/54 (31.48%), Postives = 30/54 (55.56%), Query Frame = 2
Query: 119 GKPLMHAVQYNSYGGGAADLKHVELSVPTPSKDEVLLKLEATALNPVDWKVQKG 280
G+ LM AV+ +GG +++VP P + L+K+ A +NPV+ ++ G
Sbjct: 4 GQKLMRAVRVFEFGGPEVLKLQSDIAVPIPKDHQALIKVHACGVNPVETYIRSG 57
BLAST of FC875621 vs. ExPASy Swiss-Prot
Match: QOR_RAT (Quinone oxidoreductase OS=Rattus norvegicus GN=Cryz PE=2 SV=1) HSP 1 Score: 51.9878 bits (123), Expect = 1.819e-11 Identity = 36/114 (31.58%), Postives = 54/114 (47.37%), Query Frame = 3
Query: 312 PCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVTRPPEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAK 653
P P +D FK GD+V F T GG AEFA++ +++T P + +G+ L + TA +AL SA + +++LV ASGGVG Q+A+
Sbjct: 66 PYTPGSDVAGIIESVGDGVSAFKKGDRVFCFS----TVSGGYAEFALSADNTTYPLPETLDFRQGAALGIPYFTACRALFHSARARAG-----ESVLVHGASGGVGLATCQIAR 170 HSP 2 Score: 37.7354 bits (86), Expect = 1.819e-11 Identity = 17/54 (31.48%), Postives = 30/54 (55.56%), Query Frame = 2
Query: 119 GKPLMHAVQYNSYGGGAADLKHVELSVPTPSKDEVLLKLEATALNPVDWKVQKG 280
G+ LM A++ +GG ++ VP P +VL+K+ A +NPV+ ++ G
Sbjct: 4 GQKLMRAIRVFEFGGPEVLKLQSDVVVPAPQSHQVLIKVHACGVNPVETYIRSG 57
BLAST of FC875621 vs. ExPASy Swiss-Prot
Match: QOR_CAVPO (Quinone oxidoreductase OS=Cavia porcellus GN=CRYZ PE=1 SV=1) HSP 1 Score: 51.2174 bits (121), Expect = 1.819e-11 Identity = 36/114 (31.58%), Postives = 53/114 (46.49%), Query Frame = 3
Query: 312 PCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVTRPPEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAK 653
P P TD FK GD+V T GG AE+A+A + + P ++ +G+ + + TA +AL SA K +++LV ASGGVG A Q+A+
Sbjct: 66 PYTPGTDVAGVVESIGNDVSAFKKGDRVFT----TSTISGGYAEYALASDHTVYRLPEKLDFRQGAAIGIPYFTACRALFHSARAKAG-----ESVLVHGASGGVGLAACQIAR 170 HSP 2 Score: 38.5058 bits (88), Expect = 1.819e-11 Identity = 17/54 (31.48%), Postives = 31/54 (57.41%), Query Frame = 2
Query: 119 GKPLMHAVQYNSYGGGAADLKHVELSVPTPSKDEVLLKLEATALNPVDWKVQKG 280
G+ LM A++ +GG +++VP P +VL+K+ A +NPV+ ++ G
Sbjct: 4 GQKLMRAIRVFEFGGPEVLKVQSDVAVPIPKDHQVLIKVHACGINPVETYIRSG 57
BLAST of FC875621 vs. ExPASy Swiss-Prot
Match: QOR_PIG (Quinone oxidoreductase OS=Sus scrofa GN=CRYZ PE=2 SV=1) HSP 1 Score: 47.7506 bits (112), Expect = 6.705e-11 Identity = 35/114 (30.70%), Postives = 52/114 (45.61%), Query Frame = 3
Query: 312 PCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVTRPPEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAK 653
P P D FK GD+V + T GG AE+A+A + + P ++ +G+ + + TA AL SA VK + +L+ ASGGVG A Q+A+
Sbjct: 66 PYTPGLDVAGIVEAVGEHVSSFKKGDRVFT----VSTLSGGYAEYALAADDTVYMLPEKLDFKQGAAIGIPYFTACLALLHSACVKAG-----EIVLIHGASGGVGIAACQIAR 170 HSP 2 Score: 40.0466 bits (92), Expect = 6.705e-11 Identity = 17/54 (31.48%), Postives = 32/54 (59.26%), Query Frame = 2
Query: 119 GKPLMHAVQYNSYGGGAADLKHVELSVPTPSKDEVLLKLEATALNPVDWKVQKG 280
G+ LM A++ +GG ++++P P ++VL+K+ A +NPVD ++ G
Sbjct: 4 GQKLMSAIRVFKFGGPEVMKLQSDVAIPIPKDNQVLIKVHACGVNPVDTYIRSG 57 The following BLAST results are available for this feature:
BLAST of FC875621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875621 ID=FC875621; Name=FC875621; organism=Citrus clementina; type=EST; length=694bpback to top |