FC875622
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA2A_ARATH (Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana GN=PAB1 PE=1 SV=1) HSP 1 Score: 385.571 bits (989), Expect = 1.535e-106 Identity = 195/206 (94.66%), Postives = 200/206 (97.09%), Query Frame = 1 Query: 118 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFEGQISEK 735 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDE+SV KIQ LTPNIGVVYSGMGPDFRVLVRKSR+QAEQY RLYKEPIPVTQLVRETA VMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRY E+MELDDA+HTAILTLKEGFEG+IS K Sbjct: 1 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGFEGEISSK 206
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA2B_ARATH (Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 384.03 bits (985), Expect = 4.466e-106 Identity = 194/206 (94.17%), Postives = 199/206 (96.60%), Query Frame = 1 Query: 118 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFEGQISEK 735 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDE+SV KIQ LTPNIG VYSGMGPDFRVLVRKSR+QAEQY RLYKEPIPVTQLVRETA VMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRY E+MELDDA+HTAILTLKEGFEG+IS K Sbjct: 1 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGFEGEISSK 206
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSJ (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica GN=PAB1 PE=2 SV=1) HSP 1 Score: 381.333 bits (978), Expect = 2.895e-105 Identity = 191/204 (93.63%), Postives = 200/204 (98.04%), Query Frame = 1 Query: 118 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFEGQIS 729 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKA+NGVVIATEKKLPSILVDE+SV KIQSLTPNIGVVYSGMGPDFRVLVRKSR+QA+QY+RLYKE IPVTQLVRETAAVMQEFTQSGGVRPFGVSLL+AGYDD GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRY E+MELDDA+HTAILTLKEG+EGQIS Sbjct: 1 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEGQIS 204
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSI (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. indica GN=PAB1 PE=2 SV=2) HSP 1 Score: 381.333 bits (978), Expect = 2.895e-105 Identity = 191/204 (93.63%), Postives = 200/204 (98.04%), Query Frame = 1 Query: 118 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFEGQIS 729 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKA+NGVVIATEKKLPSILVDE+SV KIQSLTPNIGVVYSGMGPDFRVLVRKSR+QA+QY+RLYKE IPVTQLVRETAAVMQEFTQSGGVRPFGVSLL+AGYDD GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRY E+MELDDA+HTAILTLKEG+EGQIS Sbjct: 1 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEGQIS 204
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA2_CARAU (Proteasome subunit alpha type-2 OS=Carassius auratus GN=psma2 PE=2 SV=3) HSP 1 Score: 295.819 bits (756), Expect = 1.599e-79 Identity = 144/206 (69.90%), Postives = 177/206 (85.92%), Query Frame = 1 Query: 118 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFEGQISEK 735 M D YSFSLTTFSPSGKLVQIE+AL AV +G S+GIKASNGVV+ATEKK SIL DE SVHKI+ +T +IG+VYSGMGPD+RVLVR++R+ A+QY +Y+EPIP QLV+ A+VMQE+TQSGGVRPFGVSLL+AG+D+ P L+Q DPSG+YF+WKA+AMGK+ N KTFLEKRY E++EL+DA+HTAILTLKE FEGQ++E+ Sbjct: 1 MADRGYSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKASNGVVLATEKKQKSILYDEQSVHKIEPITKHIGMVYSGMGPDYRVLVRRARKLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEDRPYLFQSDPSGAYFAWKATAMGKSYVNGKTFLEKRYNEDLELEDAIHTAILTLKESFEGQMTEE 206
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA2_XENLA (Proteasome subunit alpha type-2 OS=Xenopus laevis GN=psma2 PE=2 SV=2) HSP 1 Score: 294.278 bits (752), Expect = 4.654e-79 Identity = 141/205 (68.78%), Postives = 176/205 (85.85%), Query Frame = 1 Query: 118 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFEGQISE 732 M + YSFSLTTFSPSGKLVQIE+AL AV +G S+GIKA+NGVV+ATEKK SIL DE S HK++ +T +IG+VYSGMGPD+RVLVR++R+ A+QY+ +Y+EPIP QLV+ A+VMQE+TQSGGVRPFGVSLL+AG+D+ P L+Q DPSG+YF+WKA+AMGKN N KTFLEKRY E++EL+DA+HTAILTLKE FEGQ++E Sbjct: 1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKATNGVVLATEKKQKSILYDEQSAHKVEPITKHIGMVYSGMGPDYRVLVRRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILTLKESFEGQMTE 205
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA2_DICDI (Proteasome subunit alpha type-2 OS=Dictyostelium discoideum GN=psmA2 PE=3 SV=1) HSP 1 Score: 293.508 bits (750), Expect = 7.938e-79 Identity = 141/203 (69.46%), Postives = 179/203 (88.18%), Query Frame = 1 Query: 124 DSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFEGQISE 732 DS YSFSLTTFSPSGKLVQIEHAL A SG +++GIKA NGVV+ TEKKL S LVD +SV KI +T NIG+VY+GMGPD RVL++K+R+++E+Y++ YKE IPV QLVRE A++MQEFTQSGGVRPFGVSLLVAG+D+KGP LYQVDPSGSYF+WKA+A+GKN+ ++KTFLEKRY +++E++DA+ TA++T+KEGFE Q++E Sbjct: 2 DSDYSFSLTTFSPSGKLVQIEHALQAAASGGSAIGIKAKNGVVLITEKKLHS-LVDVTSVQKISMITENIGLVYAGMGPDSRVLIKKARKESEKYYKQYKEKIPVLQLVRELASIMQEFTQSGGVRPFGVSLLVAGFDEKGPHLYQVDPSGSYFAWKATAIGKNMVSSKTFLEKRYSDDLEIEDAIQTALITIKEGFETQLTE 203
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA2_RAT (Proteasome subunit alpha type-2 OS=Rattus norvegicus GN=Psma2 PE=1 SV=3) HSP 1 Score: 289.656 bits (740), Expect = 1.146e-77 Identity = 139/205 (67.80%), Postives = 174/205 (84.88%), Query Frame = 1 Query: 118 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFEGQISE 732 M + YSFSLTTFSPSGKLVQIE+AL AV G S+GIKA+NGVV+ATEKK SIL DE SVHK++ +T +IG+VYSGMGPD+RVLV ++R+ A+QY+ +Y+EPIP QLV+ A+VMQE+TQSGGVRPFGVSLL+ G+++ P L+Q DPSG+YF+WKA+AMGKN N KTFLEKRY E++EL+DA+HTAILTLKE FEGQ++E Sbjct: 1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILTLKESFEGQMTE 205
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA2_HUMAN (Proteasome subunit alpha type-2 OS=Homo sapiens GN=PSMA2 PE=1 SV=2) HSP 1 Score: 289.656 bits (740), Expect = 1.146e-77 Identity = 139/205 (67.80%), Postives = 174/205 (84.88%), Query Frame = 1 Query: 118 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFEGQISE 732 M + YSFSLTTFSPSGKLVQIE+AL AV G S+GIKA+NGVV+ATEKK SIL DE SVHK++ +T +IG+VYSGMGPD+RVLV ++R+ A+QY+ +Y+EPIP QLV+ A+VMQE+TQSGGVRPFGVSLL+ G+++ P L+Q DPSG+YF+WKA+AMGKN N KTFLEKRY E++EL+DA+HTAILTLKE FEGQ++E Sbjct: 1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILTLKESFEGQMTE 205
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA2_BOVIN (Proteasome subunit alpha type-2 OS=Bos taurus GN=PSMA2 PE=1 SV=3) HSP 1 Score: 289.656 bits (740), Expect = 1.146e-77 Identity = 139/205 (67.80%), Postives = 174/205 (84.88%), Query Frame = 1 Query: 118 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFEGQISE 732 M + YSFSLTTFSPSGKLVQIE+AL AV G S+GIKA+NGVV+ATEKK SIL DE SVHK++ +T +IG+VYSGMGPD+RVLV ++R+ A+QY+ +Y+EPIP QLV+ A+VMQE+TQSGGVRPFGVSLL+ G+++ P L+Q DPSG+YF+WKA+AMGKN N KTFLEKRY E++EL+DA+HTAILTLKE FEGQ++E Sbjct: 1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILTLKESFEGQMTE 205 The following BLAST results are available for this feature:
BLAST of FC875622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875622 ID=FC875622; Name=FC875622; organism=Citrus clementina; type=EST; length=740bpback to top |