FC875628

Overview
NameFC875628
Unique NameFC875628
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10281 contig Ccv1_Contig10281:1..696. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: GSTZ_EUPES (Glutathione S-transferase zeta class OS=Euphorbia esula PE=2 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 2.210e-88
Identity = 157/210 (74.76%), Postives = 187/210 (89.05%), Query Frame = 2
Query:   56 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPEFLEINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDAPS 685
            LKL+SY+RSSCS RVRI LNLKGL+YEY  VNL+KGEQF+PEFL+INPIGYVPALVDG+ V+SDSFAILMYLEEKYP+ P+LP+D+ +KAINYQAANIVSSSIQPLQNLAV+ +I EK   DE+  W + HI KGFAALEKLL+ +AG++ATGDEV+LADL L PQ++AA+ RFN+DMTQFPLLLRLHEAYS+LP FQNA+P+KQPD+ S
Sbjct:   12 LKLYSYFRSSCSFRVRIALNLKGLDYEYVPVNLLKGEQFTPEFLKINPIGYVPALVDGEDVISDSFAILMYLEEKYPEHPILPADIHKKAINYQAANIVSSSIQPLQNLAVLNFIGEKVSPDEKVPWVQRHISKGFAALEKLLQGHAGRFATGDEVYLADLFLEPQIHAAITRFNVDMTQFPLLLRLHEAYSQLPEFQNAMPDKQPDSTS 221          
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: GSTZ1_ARATH (Glutathione S-transferase zeta-class 1 OS=Arabidopsis thaliana GN=GST18 PE=1 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 2.449e-79
Identity = 138/211 (65.40%), Postives = 175/211 (82.94%), Query Frame = 2
Query:   56 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPEFLEINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDAPSS 688
            LKL+SYWRSSC+HRVRI L LKGL+YEY  VNL+KG+QF  +F +INP+G VPALVDGD V++DSFAI+MYL+EKYP+PPLLP DL ++A+NYQA +IV S IQP QNLAV++YIEEK   +E+  W    I KGF ALEKLL + AGK+ATGDE++LADL LAPQ++ A+NRF ++M  +P L + +E+Y++LPAFQNA+PEKQPDAPSS
Sbjct:    9 LKLYSYWRSSCAHRVRIALALKGLDYEYIPVNLLKGDQFDSDFKKINPMGTVPALVDGDVVINDSFAIIMYLDEKYPEPPLLPRDLHKRAVNYQAMSIVLSGIQPHQNLAVIRYIEEKINVEEKTAWVNNAITKGFTALEKLLVNCAGKHATGDEIYLADLFLAPQIHGAINRFQINMEPYPTLAKCYESYNELPAFQNALPEKQPDAPSS 219          
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: GSTZ2_ARATH (Probable glutathione S-transferase zeta-class 2 OS=Arabidopsis thaliana GN=At2g02380 PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 3.536e-78
Identity = 137/211 (64.93%), Postives = 173/211 (81.99%), Query Frame = 2
Query:   56 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPEFLEINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDAPSS 688
            LKL+SYWRSSC+HRVRI L LKGL+YEY  VNL+KG+Q   +F +INP+G VPALVDGD V++DSFAI+MYL++KYP+PPLLPSD  ++A+NYQA +IV S IQP QN+A+ +Y+E+K  A+E+  W    I KGF ALEKLL   AGKYATGDEV+LADL LAPQ++AA NRF+++M  FP L R +E+Y++LPAFQNAVPEKQPD PS+
Sbjct:   12 LKLYSYWRSSCAHRVRIALTLKGLDYEYIPVNLLKGDQSDSDFKKINPMGTVPALVDGDVVINDSFAIIMYLDDKYPEPPLLPSDYHKRAVNYQATSIVMSGIQPHQNMALFRYLEDKINAEEKTAWITNAITKGFTALEKLLVSCAGKYATGDEVYLADLFLAPQIHAAFNRFHINMEPFPTLARFYESYNELPAFQNAVPEKQPDTPST 222          
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: GSTZ1_DIACA (Glutathione S-transferase 1 OS=Dianthus caryophyllus GN=GST1 PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.591e-70
Identity = 128/198 (64.65%), Postives = 165/198 (83.33%), Query Frame = 2
Query:   56 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPEFLEINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQ 649
            ++L+S+  SSC+ RVRI L+LKGL++EYKAV+L KGE  +PEFL++NP+GYVP LV GD V++DS AI+MYLEEK+P+ PLLP DL+++A+NYQAANIV+S+IQPLQNLAV+ YIEEK G+DE+  WAK HI KGF+ALEKLLK +AGKYATGDEV LADL LAPQ+ A++  F +DM +FPLL  L++AY K   F+
Sbjct:    9 MQLYSFSLSSCAWRVRIALHLKGLDFEYKAVDLFKGEHLTPEFLKLNPLGYVPVLVHGDIVIADSLAIIMYLEEKFPENPLLPQDLQKRALNYQAANIVTSNIQPLQNLAVLNYIEEKLGSDEKLSWAKHHIKKGFSALEKLLKGHAGKYATGDEVGLADLFLAPQIIASITGFGMDMAEFPLLKSLNDAYLKYQHFR 206          
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: GSTZ_WHEAT (Glutathione S-transferase OS=Triticum aestivum GN=GSTZ1 PE=1 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 9.035e-66
Identity = 122/209 (58.37%), Postives = 156/209 (74.64%), Query Frame = 2
Query:   62 LFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPEFLEINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDAPSS 688
            L+  W SSCSHRVRI LNLKG++YEYKAVN     +  P++ +INPI Y+PALVDGDFV+SDS AI++YLE+KYPQ PL+P D+K K ++ Q ANIV SSIQPLQ   V+   E +   DE     + +I KGF A+EKLL     KY  GDEV L D+CLAPQ++AA+NRF +DMT++P+L RLH+AY K+PAFQ A+P+ QPDAPS+
Sbjct:    8 LYGAWISSCSHRVRIALNLKGVDYEYKAVN----PRTDPDYEKINPIKYIPALVDGDFVLSDSLAIMLYLEDKYPQHPLVPKDIKTKGLDLQIANIVCSSIQPLQGYGVIGLHEGRLSPDESLEVVQRYIDKGFRAIEKLLDGCDSKYCVGDEVHLGDVCLAPQIHAAINRFQIDMTKYPILSRLHDAYMKIPAFQAALPQNQPDAPSA 212          
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: GSTZ2_DIACA (Glutathione S-transferase 2 (Fragment) OS=Dianthus caryophyllus GN=GST2 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.884e-49
Identity = 90/137 (65.69%), Postives = 118/137 (86.13%), Query Frame = 2
Query:   56 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPEFLEINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFA 466
            ++L+SY  SSC+ RVRI L+LKGL++EYKAV+L+KGE  +PEFL++NP+GYVPALV GD V++DS AI+MYLEEK+P+ PLLP DL+++A+NYQAANIV+S+IQP QNLAV+ YIEEK G+DE+  WA  HI KGF+
Sbjct:    9 MQLYSYSSSSCAWRVRIALHLKGLDFEYKAVDLLKGEHLTPEFLKLNPLGYVPALVHGDIVIADSLAIIMYLEEKFPENPLLPRDLQKRALNYQAANIVASNIQPFQNLAVLNYIEEKLGSDEKLSWANHHIKKGFS 145          
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: MAAI_DICDI (Maleylacetoacetate isomerase OS=Dictyostelium discoideum GN=mai PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.228e-47
Identity = 99/213 (46.48%), Postives = 139/213 (65.26%), Query Frame = 2
Query:   50 NMLKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVK--GEQFSPEFLEINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGAD-ERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDA 679
            N   L+SYWRSSCS RVR+ L  K ++YEYKA++L+K  G+Q S E+ ++NP+  +P L     ++  S AIL YLEE +P+ PL+P     +AI  Q   I+ S IQPLQNL V+  I + +G D ++  WA+T I  GF  LEKLL+ ++GK+  GD V  ADLCL  Q+Y A NRFN+DMT +P + R+++    +P F  A+P+ QPDA
Sbjct:    4 NKTVLYSYWRSSCSWRVRVALAYKKIKYEYKAIHLLKDGGQQKSDEYSKLNPMKAIPTLEIDGHIIGQSLAILEYLEETHPENPLMPKGSYERAIARQMMQIIGSDIQPLQNLKVLGLIAQYSGDDSKKSEWARTVITNGFNGLEKLLEKHSGKFCVGDSVSFADLCLPAQVYNA-NRFNVDMTPYPNITRVNQHLLTIPEFIEALPQNQPDA 215          
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: MAAI2_DROME (Probable maleylacetoacetate isomerase 2 OS=Drosophila melanogaster GN=CG9363 PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.314e-45
Identity = 97/210 (46.19%), Postives = 138/210 (65.71%), Query Frame = 2
Query:   62 LFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVK--GEQFSPEFLEINPIGYVPAL-VDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDAP 682
            L+SYWRSSCS RVRI +NLK + Y+ K ++L+K  GEQ   E+ E+NP+  VPAL +DG  ++ +S AI+ YLEE  PQ PLLP D+ ++A   +   I+ S IQPLQNL V+ ++    G +++  WA+  I +GF A+EK L   AGKY  GDE+ +AD CL PQ++ A  RF++D+  +P++LR+       PAF+ A P  QPD P
Sbjct:   18 LYSYWRSSCSWRVRIAMNLKEIPYDIKPISLIKSGGEQHCNEYREVNPMEQVPALQIDGHTLI-ESVAIMHYLEETRPQRPLLPQDVHKRAKVREIVEIICSGIQPLQNLIVLIHV----GEEKKKEWAQHWITRGFRAVEKALSTSAGKYCVGDEISMADCCLVPQVFNA-RRFHVDLRPYPIILRIDRELESNPAFRAAHPSNQPDCP 221          
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: MAAI_MOUSE (Maleylacetoacetate isomerase OS=Mus musculus GN=Gstz1 PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.341e-44
Identity = 95/210 (45.24%), Postives = 137/210 (65.24%), Query Frame = 2
Query:   62 LFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVK--GEQFSPEFLEINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDAPS 685
            L+SY+RSSCS RVRI L LKG++YE   +NL+K  G+QF+ EF  +NP+  VPAL      +  S AI+ YLEE  P P LLP D +++AI    +++++S IQPLQNL+V+K +    G + +  WA+  I  GF ALEK+L+  AGKY  GDEV +AD+CL PQ+ A   RF +D++ +P +  +++    L  FQ + P +QPD P+
Sbjct:    8 LYSYFRSSCSWRVRIALALKGIDYEIVPINLIKDGGQQFTEEFQTLNPMKQVPALKIDGITIVQSLAIMEYLEETRPIPRLLPQDPQKRAIVRMISDLIASGIQPLQNLSVLKQV----GQENQMQWAQKVITSGFNALEKILQSTAGKYCVGDEVSMADVCLVPQV-ANAERFKVDLSPYPTISHINKELLALEVFQVSHPRRQPDTPA 212          
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: MAAI_CAEEL (Probable maleylacetoacetate isomerase OS=Caenorhabditis elegans GN=gst-42 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.833e-42
Identity = 95/205 (46.34%), Postives = 135/205 (65.85%), Query Frame = 2
Query:   62 LFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPEFLEINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPD 676
            L+SYWRSSCS RVRI L LK ++YEYK V+L+  E+   +  EINP   VP  V    V+++S AI+ YLEE +P  PLLP D  ++A     + +V+S IQPL NL V++ + +K  A     +AK  + +G  ALE LLK ++GKYA GD+V +ADL + P +Y+A NRFNLD++ +P + R++E  + +PAF  A P+ QPD
Sbjct:    8 LYSYWRSSCSWRVRIALALKNVDYEYKTVDLLS-EEAKSKLKEINPAAKVPTFVVDGQVITESLAIIEYLEETHPDVPLLPKDPIKRAHARAISLLVASGIQPLHNLKVLQLLNKKE-AGFGGQFAKQFVVEGLTALEILLKQHSGKYAVGDDVTIADLSIPPLIYSA-NRFNLDLSPYPTVNRINETLADIPAFIAAHPDNQPD 209          
The following BLAST results are available for this feature:
BLAST of FC875628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
GSTZ_EUPES2.210e-8874.76Glutathione S-transferase zeta class OS=Euphorbia ... [more]
GSTZ1_ARATH2.449e-7965.40Glutathione S-transferase zeta-class 1 OS=Arabidop... [more]
GSTZ2_ARATH3.536e-7864.93Probable glutathione S-transferase zeta-class 2 OS... [more]
GSTZ1_DIACA1.591e-7064.65Glutathione S-transferase 1 OS=Dianthus caryophyll... [more]
GSTZ_WHEAT9.035e-6658.37Glutathione S-transferase OS=Triticum aestivum GN=... [more]
GSTZ2_DIACA5.884e-4965.69Glutathione S-transferase 2 (Fragment) OS=Dianthus... [more]
MAAI_DICDI3.228e-4746.48Maleylacetoacetate isomerase OS=Dictyostelium disc... [more]
MAAI2_DROME2.314e-4546.19Probable maleylacetoacetate isomerase 2 OS=Drosoph... [more]
MAAI_MOUSE3.341e-4445.24Maleylacetoacetate isomerase OS=Mus musculus GN=Gs... [more]
MAAI_CAEEL1.833e-4246.34Probable maleylacetoacetate isomerase OS=Caenorhab... [more]

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Properties
Property NameValue
Genbank descriptionC31401A09EF CTVClemen1 Citrus clementina cDNA clone C31401A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875628 ID=FC875628; Name=FC875628; organism=Citrus clementina; type=EST; length=696bp
GAATCTGCAGTGCTTGTGTAGTCTGGTTAGAGACAGAACCTGTTGATAAA
ACATGCTGAAACTGTTTTCATACTGGAGGAGTTCATGCTCACATCGTGTC
AGAATTGGTCTCAACTTGAAAGGGTTAGAATATGAGTACAAAGCAGTTAA
CTTGGTGAAAGGAGAGCAATTCAGTCCTGAGTTTTTGGAGATCAACCCTA
TTGGCTACGTGCCGGCTTTGGTTGATGGAGATTTTGTTGTATCTGATTCT
TTTGCCATTTTAATGTACCTGGAAGAGAAGTATCCTCAGCCTCCATTGTT
GCCTTCTGATCTTAAGAGAAAAGCTATCAATTATCAGGCTGCAAATATTG
TTTCCTCGAGCATACAGCCTCTTCAGAATCTTGCTGTAGTGAAGTACATT
GAGGAAAAAGCTGGTGCAGATGAGAGAGACATCTGGGCTAAAACTCACAT
TGGAAAAGGCTTTGCGGCACTTGAGAAGCTGCTAAAAGACTATGCTGGGA
AATATGCAACTGGAGATGAAGTTTTCCTGGCAGATTTGTGTCTGGCACCA
CAGCTTTATGCAGCGGTCAACAGGTTCAACCTTGACATGACCCAATTCCC
TCTTTTGCTGAGGTTGCATGAGGCATACAGCAAGCTACCGGCATTTCAAA
ATGCTGTACCAGAAAAACAACCGGATGCCCCTTCATCATGAAGTAT
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