FC875637

Overview
NameFC875637
Unique NameFC875637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10285 contig Ccv1_Contig10285:1..715. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875637 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 322.398 bits (825), Expect = 1.487e-87
Identity = 151/211 (71.56%), Postives = 175/211 (82.94%), Query Frame = 3
Query:   60 MANE-VVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAP-LLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAQALPDGKKVFEFV 686
            MANE V+LLDFWPSMFG+R+RIALAEK +KYEYKEEDL+NKSPLLLQMNP+HKKIPVLIHNG+P CES I V+YI+EVWKDKAP LLPSDPY RAQARFW D+IDKK+YD  RK WTTKG             LK LEG LGDKP+FGG++FG+VD++LI +Y WFY YET G F+ EAECPKF+AW KRC+QRE+VA++LPD  KV EFV
Sbjct:    1 MANEEVILLDFWPSMFGMRLRIALAEKEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKGEEQEAAKKDFIECLKVLEGALGDKPYFGGESFGFVDIALIGYYSWFYAYETFGNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFV 211          
BLAST of FC875637 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 1.259e-86
Identity = 149/211 (70.62%), Postives = 174/211 (82.46%), Query Frame = 3
Query:   60 MANE-VVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAP-LLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAQALPDGKKVFEFV 686
            MANE V+LLDFWPSMFG+R+RIALAEK +KYEYK+EDL+NKSPLLLQMNP+HKKIPVLIHNG+P CES I V+YI+EVWKDKAP LLPSDPY RAQARFW D+IDKK+YD  RK W TKG             LK LEG LGD+P+FGG++FG+VD++LI FY WFY YET G F+ EAECPKF+AW KRC+QRE+VA++LPD  KV EFV
Sbjct:    1 MANEEVILLDFWPSMFGMRLRIALAEKEIKYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKGEEQEAAKKDFIECLKVLEGALGDRPYFGGESFGFVDIALIGFYSWFYAYETFGNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFV 211          
BLAST of FC875637 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 5.473e-82
Identity = 138/209 (66.03%), Postives = 166/209 (79.43%), Query Frame = 3
Query:   60 MANEVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAQALPDGKKVFEFV 686
            M++EVVLLD W SM+G+R RIALAEKGV+YEYKEE+L N+SPLLLQMNP+HKKIPVLIHNG+P CES IIVQYIDEVW DK+PL+PSDPY+R+QARFWVD+IDKK+YD+ +K W +KG            + K LE  L DKPF+G D FG+VDL LI F  WFYTYET G F +E ECPK +AWVKRC++RETV+  LPD KKV+  +
Sbjct:    1 MSDEVVLLDTWASMYGMRARIALAEKGVRYEYKEENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSPLMPSDPYKRSQARFWVDYIDKKIYDTWKKMWLSKGEEHEEGKKELISIFKQLEETLTDKPFYGDDTFGFVDLCLITFSSWFYTYETYGNFKMEEECPKLMAWVKRCMERETVSNTLPDAKKVYGLI 209          
BLAST of FC875637 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 3.108e-77
Identity = 126/208 (60.58%), Postives = 164/208 (78.85%), Query Frame = 3
Query:   63 ANEVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAQALPDGKKVFEFV 686
            +N VVLLDFWPS FG+R+RIALA KG+KYE KEE+L +KSPLLL+MNPVHKKIP+LIHN +  CES  I++YIDEVW DK PLLPSDPY+R+QARFW D+IDKK+Y + R+ W+ KG            +LKTLEG+LG+K +FGGDN G+VD++L+PF  WFY+YETC  F++EAECPK + W K C++ E+V+++LP   K++ FV
Sbjct:    3 SNNVVLLDFWPSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCPLLPSDPYERSQARFWADYIDKKIYSTGRRVWSGKGEDQEEAKKEFIEILKTLEGELGNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSIEAECPKLVVWAKTCMESESVSKSLPHPHKIYGFV 210          
BLAST of FC875637 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 5.134e-72
Identity = 121/208 (58.17%), Postives = 161/208 (77.40%), Query Frame = 3
Query:   63 ANEVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAQALPDGKKVFEFV 686
            +N VVLLDF  S FG+R+RIALA KG+KYE KEE+L +KSPLLL+MNPVHKKIP+LIHNG+P CES  I++YIDEVW +K PLLPSDPYQR+QARFW ++ID K+Y + R+ W+ KG            + KTLEG+LG+K +FGGDN G+VD++L+PF  WFY+YETC  F++EAEC K + W + C++ E V+++LP   K+++FV
Sbjct:    3 SNNVVLLDFSGSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCPLLPSDPYQRSQARFWANYIDNKIYSTGRRVWSGKGEDQEEAKKEFIEIFKTLEGELGNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSIEAECRKLVVW-QNCMENERVSKSLPHPHKIYDFV 209          
BLAST of FC875637 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSJ (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. japonica GN=GSTU1 PE=1 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 7.958e-57
Identity = 106/216 (49.07%), Postives = 144/216 (66.67%), Query Frame = 3
Query:   69 EVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAPLLP-------SDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFF---GGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAQALPDGKKVFEFV 686
            E+VLLDFW S FG R RIA+AEKG+++EY+EEDL NKS LLL+ NPVH+KIPVL+H GRP  ES +I+QY+D+ +     LLP          Y RA ARFW D++D+K+YD   + W  KG            +L+TLE +LGD+ FF   GG   G+VD++L+PF  WFY+YE CG F+VE   P+  AW +RC + ++V + LP  +KV++FV
Sbjct:    6 ELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFV 221          
BLAST of FC875637 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSI (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. indica GN=GSTU1 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.773e-56
Identity = 107/216 (49.54%), Postives = 147/216 (68.06%), Query Frame = 3
Query:   69 EVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAPLL-PSD------PYQRAQARFWVDFIDKKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFF---GGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAQALPDGKKVFEFV 686
            E+VLLDFW S FG R RIA+AEKG+++EY+EEDL NKS LLL+ NPVH+KIPVL+H GRP  ES +I+QY+D+ +     LL P++       Y RA ARFW D++D+K+YD   + W  KG            +L+TLE +LGD+ FF   GG   G+VD++L+PF  WFY+YE CG F+VE   P+  AW +RC + ++VA+ LP  +KV++FV
Sbjct:    6 ELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVAKHLPSPEKVYDFV 221          
BLAST of FC875637 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.850e-38
Identity = 92/211 (43.60%), Postives = 123/211 (58.29%), Query Frame = 3
Query:   69 EVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDL--SLIPFYCWFYTYETCGKFNVEAE-CPKFIAWVKRCLQRETVAQALPDGKKVFEFVSS 692
            EV LL FW S F  RV  AL  KGVKYEY EED  NKS LLLQ NP+HKK+PVLIHNG+   ES +I++YIDE ++  + +LP DPY RA ARFW  F+D K+  ++ KT+  KG            +LK L+ +L DK FF GD FG+ D+  +L+ F+   +  E  G   V +E  P F  W    +    + ++LP   ++  F  S
Sbjct:    3 EVKLLGFWYSPFSRRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETFEGPS-ILPKDPYDRALARFWAKFLDDKV-PAVVKTFLRKGEEQEKDKEEVCEMLKVLDNELKDKKFFVGDKFGFADIAANLVAFWLGVFE-EASGVVLVTSEKFPNFCKWRGEYINCSQIKESLPPRDELLAFYRS 210          
BLAST of FC875637 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.335e-38
Identity = 92/207 (44.44%), Postives = 120/207 (57.97%), Query Frame = 3
Query:   69 EVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYET-CGKFNVEAE-CPKFIAWVKRCLQRETVAQALPDGKKVFEF 683
            EV LL FW S F  RV  AL  KGVKYEY EED  NKS LLLQ NPV+KK+PVLIHNG+P  ES II++YIDE ++  + +LP DPY RA ARFW  F+D K+  ++  T+  KG            +LK L+ +L DK FF GD FG+ D++      W   +E   G   V++E  P F  W    +    V ++LP   ++  F
Sbjct:    3 EVKLLGFWYSPFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETFEGPS-ILPKDPYDRALARFWAKFLDDKV-AAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFAGDKFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDELLAF 207          
BLAST of FC875637 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.004e-37
Identity = 86/208 (41.35%), Postives = 119/208 (57.21%), Query Frame = 3
Query:   69 EVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPFCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSLRKT-WTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNV--EAECPKFIAWVKRCLQRETVAQALPDGKKVFEF 683
            +V LL    S F  RV+IAL  KGV+Y++ EE+L NKS LLL+ NPVHKK+PV +HN +P  ES +IV+YIDE WK+  P+LPSDPYQRA ARFW  FID K+  ++ K+ +T                L+ LE +L DK FFGG+ FG VD++ +    W   ++      +    + P    W +  L    V + LP    +F +
Sbjct:    7 DVKLLGIVGSPFVCRVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNN-PILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENELKDKKFFGGEEFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLPPRDPLFAY 213          
The following BLAST results are available for this feature:
BLAST of FC875637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
GSTX4_TOBAC1.487e-8771.56Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC1.259e-8670.62Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX3_SOYBN5.473e-8266.03Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTXA_TOBAC3.108e-7760.58Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX1_NICPL5.134e-7258.17Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]
GSTU1_ORYSJ7.958e-5749.07Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTU1_ORYSI1.773e-5649.54Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTX1_TOBAC4.850e-3843.60Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX2_TOBAC6.335e-3844.44Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX6_SOYBN7.004e-3741.35Probable glutathione S-transferase OS=Glycine max ... [more]

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Properties
Property NameValue
Genbank descriptionC31401B08EF CTVClemen1 Citrus clementina cDNA clone C31401B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875637 ID=FC875637; Name=FC875637; organism=Citrus clementina; type=EST; length=715bp
GGGTGTTTGTCTTGTCTTTTCATTTATTCACTCTTGACTCTTAGTAAGCT
TCTGTCACAATGGCGAACGAAGTGGTTCTGTTGGATTTCTGGCCCAGCAT
GTTTGGGATAAGGGTCAGGATTGCTCTGGCGGAGAAAGGCGTCAAGTATG
AGTACAAGGAAGAGGACTTGAAGAACAAGAGCCCCCTGCTTCTGCAGATG
AACCCCGTTCACAAGAAGATCCCGGTTCTCATCCACAACGGCAGACCGTT
CTGTGAGTCACCCATCATTGTTCAGTACATTGATGAAGTGTGGAAGGACA
AGGCTCCATTGCTTCCCTCTGATCCCTACCAGAGAGCTCAAGCTAGGTTC
TGGGTAGATTTCATTGACAAGAAGATGTACGATTCTTTGAGGAAGACATG
GACCACAAAGGGAGAAGAGCAGGAGGCAGCTAAGAAGGAGTTCTTTGAAG
TTCTGAAGACTTTGGAAGGGCAGCTTGGAGACAAGCCTTTCTTCGGAGGA
GACAATTTTGGGTATGTGGATTTAAGTTTGATCCCATTCTATTGTTGGTT
TTACACGTATGAGACATGTGGAAAGTTCAACGTCGAGGCTGAGTGCCCCA
AGTTCATAGCTTGGGTGAAGAGATGCTTGCAGAGGGAGACTGTTGCCCAG
GCACTTCCTGATGGGAAGAAAGTGTTTGAATTTGTTTCNAGCGATGAGAC
AATTTAGGATTGGAG
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