FC875673

Overview
NameFC875673
Unique NameFC875673
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length335
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15105 contig Ccv1_Contig15105:450..784. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK1_ELAUM (S-adenosylmethionine synthetase 1 OS=Elaeagnus umbellata GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 3.915e-60
Identity = 108/111 (97.30%), Postives = 111/111 (100.00%), Query Frame = 1 
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQGHMFGYATDETPE+MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH
Sbjct:  121 GDQGHMFGYATDETPEYMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 231
[Close]
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_MESCR (S-adenosylmethionine synthetase OS=Mesembryanthemum crystallinum GN=METK PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 8.721e-60
Identity = 108/111 (97.30%), Postives = 110/111 (99.10%), Query Frame = 1 
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH
Sbjct:  121 GDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 231
[Close]
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_CARPA (S-adenosylmethionine synthetase OS=Carica papaya GN=SAMS PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 8.721e-60
Identity = 108/111 (97.30%), Postives = 110/111 (99.10%), Query Frame = 1 
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQGHMFGYATDETPEFMPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEYYNENGA VPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH
Sbjct:  121 GDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 231
[Close]
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK3_PETHY (S-adenosylmethionine synthetase 3 OS=Petunia hybrida GN=SAM3 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 8.721e-60
Identity = 108/111 (97.30%), Postives = 110/111 (99.10%), Query Frame = 1 
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQGHMFGYATDETPEFMPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIA DLKEHVIKPVIPEKYLDEKTIFH
Sbjct:  121 GDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAHDLKEHVIKPVIPEKYLDEKTIFH 231
[Close]
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK1_POPTR (S-adenosylmethionine synthetase 1 OS=Populus trichocarpa GN=METK1 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 8.721e-60
Identity = 107/111 (96.40%), Postives = 111/111 (100.00%), Query Frame = 1 
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQGHMFGYATDETPE+MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEYYN+NGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH
Sbjct:  121 GDQGHMFGYATDETPEYMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 231
[Close]
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK4_ATRNU (S-adenosylmethionine synthetase 4 OS=Atriplex nummularia GN=SAMS4 PE=1 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 1.139e-59
Identity = 107/111 (96.40%), Postives = 110/111 (99.10%), Query Frame = 1 
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH
Sbjct:  125 GDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 235
[Close]
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK3_ATRNU (S-adenosylmethionine synthetase 3 OS=Atriplex nummularia GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 1.139e-59
Identity = 107/111 (96.40%), Postives = 110/111 (99.10%), Query Frame = 1 
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH
Sbjct:  125 GDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 235
[Close]
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK1_ATRNU (S-adenosylmethionine synthetase 1 OS=Atriplex nummularia GN=SAMS1 PE=1 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 1.139e-59
Identity = 107/111 (96.40%), Postives = 110/111 (99.10%), Query Frame = 1 
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH
Sbjct:  125 GDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 235
[Close]
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK1_CATRO (S-adenosylmethionine synthetase 1 OS=Catharanthus roseus GN=SAMS1 PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 1.943e-59
Identity = 106/111 (95.50%), Postives = 111/111 (100.00%), Query Frame = 1 
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQGHMFGYATDETPEFMPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTV+ISTQHDETVTND+IAADLKEHVIKPVIPEKYLDE+TIFH
Sbjct:  121 GDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVVISTQHDETVTNDQIAADLKEHVIKPVIPEKYLDERTIFH 231
[Close]
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK1_BETVU (S-adenosylmethionine synthetase 1 OS=Beta vulgaris GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 2.537e-59
Identity = 106/111 (95.50%), Postives = 110/111 (99.10%), Query Frame = 1 
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEYYN+NGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH
Sbjct:  125 GDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDNGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 235
The following BLAST results are available for this feature:
BLAST of FC875673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_ELAUM3.915e-6097.30S-adenosylmethionine synthetase 1 OS=Elaeagnus umb... [more]
METK_MESCR8.721e-6097.30S-adenosylmethionine synthetase OS=Mesembryanthemu... [more]
METK_CARPA8.721e-6097.30S-adenosylmethionine synthetase OS=Carica papaya G... [more]
METK3_PETHY8.721e-6097.30S-adenosylmethionine synthetase 3 OS=Petunia hybri... [more]
METK1_POPTR8.721e-6096.40S-adenosylmethionine synthetase 1 OS=Populus trich... [more]
METK4_ATRNU1.139e-5996.40S-adenosylmethionine synthetase 4 OS=Atriplex numm... [more]
METK3_ATRNU1.139e-5996.40S-adenosylmethionine synthetase 3 OS=Atriplex numm... [more]
METK1_ATRNU1.139e-5996.40S-adenosylmethionine synthetase 1 OS=Atriplex numm... [more]
METK1_CATRO1.943e-5995.50S-adenosylmethionine synthetase 1 OS=Catharanthus ... [more]
METK1_BETVU2.537e-5995.50S-adenosylmethionine synthetase 1 OS=Beta vulgaris... [more]

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Properties
Property NameValue
Genbank descriptionC31401E10EF CTVClemen1 Citrus clementina cDNA clone C31401E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875673 ID=FC875673; Name=FC875673; organism=Citrus clementina; type=EST; length=335bp
GGTGATCAGGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAATT
TATGCCTCTGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCG
AGGTTCGAAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACA
CAAGTTACTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAG
AGTTCACACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAATG
ATGAGATCGCTGCTGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCT
GAGAAGTACCTTGATGAGAAGACTATCTTCCATCT
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