FC875675

Overview
NameFC875675
Unique NameFC875675
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10993 contig Ccv1_Contig10993:288..945. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYG_RICCO (Pyruvate kinase isozyme G, chloroplastic (Fragment) OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 2.979e-84
Identity = 158/214 (73.83%), Postives = 182/214 (85.05%), Query Frame = 3
Query:    3 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNIQVRQV 644
            E+IIR C SM K VIVATNMLESMI HPTPTRAEVSDIAIAVREGADAVMLSGETAHGK+PLKAV+VMHTV+LRTE++      PP  G A+K HM EMFA+HAT+M+NTL T I+VFTRTG MA+LLSHY+P+ TIFAFTNE+RI+QRLSLY+GV PIYMEFS DAEETF  AL LL  +G++ EGE V L+QSG QPIWR +STH+IQVR+V
Sbjct:  204 EDIIRRCHSMQKPVIVATNMLESMINHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKYPLKAVRVMHTVALRTESSSPVNTTPPAQG-AYKGHMGEMFAFHATIMANTLNTPIIVFTRTGSMAVLLSHYQPASTIFAFTNEERIKQRLSLYRGVMPIYMEFSSDAEETFSRALQLLLNKGLLVEGEHVTLVQSGAQPIWRQESTHHIQVRKV 416          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYG_TOBAC (Pyruvate kinase isozyme G, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 8.969e-81
Identity = 148/214 (69.16%), Postives = 178/214 (83.18%), Query Frame = 3
Query:    3 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNIQVRQV 644
            E+IIR C+SM K VIVATNMLESMI HPTPTRAEVSDI+IAVREGADAVMLSGETAHGK+PLKAVKVMH V+LRTE+++      P+   A+K+HM EMFA+H++ M+NTL T I+VFTRTG MAI+LSH RPS T+FAFTN +R++QRL+LY GV PIYMEFS DAEETF  A+ LL  + +VK+G+ V L+QSG QPIWR  STH+IQVR+V
Sbjct:  347 EDIIRRCQSMQKPVIVATNMLESMIDHPTPTRAEVSDISIAVREGADAVMLSGETAHGKYPLKAVKVMHIVALRTESSLQKSTSSPSQSAAYKSHMGEMFAFHSSSMANTLSTPIIVFTRTGSMAIILSHNRPSSTVFAFTNNERVKQRLALYHGVVPIYMEFSSDAEETFSRAIKLLLSKSLVKDGQYVTLVQSGAQPIWRRHSTHHIQVRKV 560          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYA_RICCO (Pyruvate kinase isozyme A, chloroplastic OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 7.949e-37
Identity = 87/206 (42.23%), Postives = 128/206 (62.14%), Query Frame = 3
Query:    3 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTE----ATITGGAMP-PNLGQAFKNHMSEMFAYHATMMSNTLGT-SIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPI 602
            + I++ CR + K VIVA+ +LESMI +PTPTRAEV+D++ AVR+ ADA+MLSGE+A G++P KA+ V+ +VS+R E          AM  P +G  + + +SE     A  M+N LG  ++ V+T+ G MA LLS  RP   IFAFT    +++RL+L  G+ P  + F+DD E   +    LL+ +GM+K G+ V  +    Q I
Sbjct:  372 QNIVQVCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQYPEKALAVLRSVSVRIEKWWREEKHHEAMELPAIGSTYSDSISEEICNSAAKMANNLGVDALFVYTKDGHMASLLSRCRPDCPIFAFTTTTSVRRRLNLQWGLIPFRLSFADDMESNLNKTFSLLKARGMIKSGDLVIAVSDMLQSI 577          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYA_TOBAC (Pyruvate kinase isozyme A, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.499e-35
Identity = 83/206 (40.29%), Postives = 125/206 (60.68%), Query Frame = 3
Query:    3 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMP-----PNLGQAFKNHMSEMFAYHATMMSNTLGT-SIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPI 602
            ++I++ CR + + VIVA+ +LESMI +P PTRAEV+D++ AVR+  DA+MLSGE+A G+FP KA+ V+ +VSLR E              P++  +F + +SE     A  M+N L   ++ V+T+ G MA LLS  RP   IFAFT    +++RL+L  G+ P  + FSDD E   +    LL+ +GM+K G+ +  +    Q I
Sbjct:  382 QKIVQICRQLNRPVIVASQLLESMIEYPIPTRAEVADVSEAVRQRGDALMLSGESAMGQFPEKALTVLRSVSLRIERMWREQKRHEVIELPSIASSFSDSISEEICNSAAKMANNLEVDALFVYTKNGHMASLLSRCRPDCPIFAFTTTTSVRRRLNLQWGLMPFRLSFSDDMESNLNKTFSLLKARGMIKSGDLIIAVSDMLQSI 587          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_LACDE (Pyruvate kinase OS=Lactobacillus delbrueckii subsp. bulgaricus GN=pyk PE=1 SV=3)

HSP 1 Score: 133.265 bits (334), Expect = 1.112e-30
Identity = 76/215 (35.35%), Postives = 127/215 (59.07%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATI-TGGAMPPNLGQAFK-NHMSEMFAYHATMMSNTLGT-SIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALL------QSGRQPIWRFQSTHN 626
            +I+ C ++GK VI AT ML+SM  +P PTRAEV+D+A AV +G DA MLSGE+A+G +P+++V+ MH + +RTE  + T   +     + +K ++++E         +  LG  +I+  T +G+ A ++S YRP  TI A T +++IQ  L +  GV P+  +   + +E F+ A  + ++ G VK+G+ V ++      QSG   + + Q   N
Sbjct:  264 LIKKCNALGKPVITATQMLDSMQENPRPTRAEVTDVANAVLDGTDATMLSGESANGLYPVQSVQAMHDIDVRTEKELDTRNTLALQRFEEYKGSNVTEAIGESVVRTAQELGVKTIIAATSSGYTARMISKYRPDATIVALTFDEKIQHSLGIVWGVEPVLAKKPSNTDEMFEEAARVAKEHGFVKDGDLVIIVAGVPFGQSGTTNLMKLQIIGN 478          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK2_YEAST (Pyruvate kinase 2 OS=Saccharomyces cerevisiae GN=PYK2 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.170e-26
Identity = 79/203 (38.92%), Postives = 105/203 (51.72%), Query Frame = 3
Query:    3 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTL---GTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYME------FSDDAEETFDNALGLLQKQGMVKEGEEVALLQ 584
            +++I  C   GK VI AT ML+SM  +P PTRAEVSD+  AV +GAD VMLSGETA G +P+ AV +M   +L  E+TI   A+  +L  A     S      A   +  L   G +IVV + TG  A LLS YRPS  I   T   R  +   LY+GV P   E      + +D        + + +  GMV  G+ V  +Q
Sbjct:  283 KKLIAKCNLAGKPVICATQMLDSMTHNPRPTRAEVSDVGNAVLDGADCVMLSGETAKGDYPVNAVNIMAATALIAESTIAHLALYDDLRDATPKPTSTTETVAAAATAAILEQDGKAIVVLSTTGNTARLLSKYRPSCPIILVTRHARTARIAHLYRGVFPFLYEPKRLDDWGEDVHRRLKFGVEMARSFGMVDNGDTVVSIQ 485          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_XENLA (Pyruvate kinase muscle isozyme OS=Xenopus laevis GN=pkm PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.313e-26
Identity = 79/216 (36.57%), Postives = 119/216 (55.09%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQA--FKNHMSEMFAYHATMMSNTLGT-SIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPI-YME-----FSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNI 629
            +I  C   GK VI AT MLESMI  P PTRAE SD+A AV +GAD +MLSGETA G +PL+AV++ H ++   EA I    +   L +        +E  A  A   S    + +I+V T++G  A LLS YRP   I + T   +  ++  LY+G+ P+ Y E     +++D +   + A+ + + +G  K G+ V +L +G +P   F +T  +
Sbjct:  309 MIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHAIAREAEAAIFHRQLFEELRRVSPLTRDPTEATAVGAVEASFKCSSGAIIVLTKSGRSAHLLSRYRPRAPIISVTRNGQTARQAHLYRGIFPVLYREAVHEAWAEDVDSRVNFAMDIGKARGFFKSGDVVIVL-TGWRPGSGFTNTMRV 523          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_BACST (Pyruvate kinase OS=Bacillus stearothermophilus GN=pyk PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 6.313e-26
Identity = 72/213 (33.80%), Postives = 117/213 (54.93%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLG-TSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQSGRQPIWRFQSTHNIQVRQV 644
            +I+ C  +GK VI AT ML+SM  +P PTRAE SD+A A+ +G DAVMLSGETA G++P++AVK MH ++LRTE  +    +     +  +  +++         +  L   +IV  T +G    +++ YRP   I A T+ + + +RL+L  GV        +  +E  D A+    + G+VK G+ V +  +   P+    ST+ ++V  +
Sbjct:  264 LIKKCNMLGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAVMLSGETAAGQYPVEAVKTMHQIALRTEQALEHRDILSQRTKESQTTITDAIGQSVAHTALNLDVAAIVTPTVSGKTPQMVAKYRPKAPIIAVTSNEAVSRRLALVWGVYTKEAPHVNTTDEMLDVAVDAAVRSGLVKHGDLVVI--TAGVPVGETGSTNLMKVHVI 474          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK2_ECOLI (Pyruvate kinase II OS=Escherichia coli (strain K12) GN=pykA PE=1 SV=3)

HSP 1 Score: 117.087 bits (292), Expect = 8.245e-26
Identity = 72/194 (37.11%), Postives = 105/194 (54.12%), Query Frame = 3
Query:    9 IIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITGGAMPPNLGQAFKNHMSEMFAYHATMMSNTLG--TSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVALLQ 584
            +IR  R + +AVI AT M+ESMI +P PTRAEV D+A AV +G DAVMLS ETA G++P + V  M  V L  E   +       L   F N + E  A  A   +N L   T+I+  T +G  A++ S       IFA +  +R     +LY+GV P++ + ++D       A+ LL+ +G +  G+ V + Q
Sbjct:  269 LIRRARQLNRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAMARVCLGAEKIPSINVSKHRLDVQFDN-VEEAIAMSAMYAANHLKGVTAIITMTESGRTALMTSRISSGLPIFAMSRHERTLNLTALYRGVTPVHFDSANDGVAAASEAVNLLRDKGYLMSGDLVIVTQ 461          
BLAST of FC875675 vs. ExPASy Swiss-Prot
Match: KPYK_BACSU (Pyruvate kinase OS=Bacillus subtilis GN=pyk PE=1 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.077e-25
Identity = 67/196 (34.18%), Postives = 109/196 (55.61%), Query Frame = 3
Query:    3 EEIIRTCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVSLRTEATITG----GAMPPNLGQAFKNHMSEMFAYHATMMSNTLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEKRIQQRLSLYQGVCPIYMEFSDDAEETFDNALGLLQKQGMVKEGEEVAL 578
            +E+I+ C ++GK VI AT ML+SM  +P PTRAE SD+A A+ +G DA+MLSGETA G +P++AV+ MH ++ R+E  +            +G    + + +  A+ A    N    +IV  T +G  A +++ YRP   I A T    I ++L+L  GV     + +   +E  ++A+      G+VK G+ + +
Sbjct:  261 KELIKKCNALGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAIMLSGETAAGSYPVEAVQTMHNIASRSEEALNYKEILSKRRDQVGMTITDAIGQSVAHTAI---NLNAAAIVTPTESGHTARMIAKYRPQAPIVAVTVNDSISRKLALVSGVFAESGQNASSTDEMLEDAVQKSLNSGIVKHGDLIVI 453          
The following BLAST results are available for this feature:
BLAST of FC875675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
KPYG_RICCO2.979e-8473.83Pyruvate kinase isozyme G, chloroplastic (Fragment... [more]
KPYG_TOBAC8.969e-8169.16Pyruvate kinase isozyme G, chloroplastic OS=Nicoti... [more]
KPYA_RICCO7.949e-3742.23Pyruvate kinase isozyme A, chloroplastic OS=Ricinu... [more]
KPYA_TOBAC1.499e-3540.29Pyruvate kinase isozyme A, chloroplastic OS=Nicoti... [more]
KPYK_LACDE1.112e-3035.35Pyruvate kinase OS=Lactobacillus delbrueckii subsp... [more]
KPYK2_YEAST2.170e-2638.92Pyruvate kinase 2 OS=Saccharomyces cerevisiae GN=P... [more]
KPYK_XENLA6.313e-2636.57Pyruvate kinase muscle isozyme OS=Xenopus laevis G... [more]
KPYK_BACST6.313e-2633.80Pyruvate kinase OS=Bacillus stearothermophilus GN=... [more]
KPYK2_ECOLI8.245e-2637.11Pyruvate kinase II OS=Escherichia coli (strain K12... [more]
KPYK_BACSU1.077e-2534.18Pyruvate kinase OS=Bacillus subtilis GN=pyk PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionC31401E12EF CTVClemen1 Citrus clementina cDNA clone C31401E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875675 ID=FC875675; Name=FC875675; organism=Citrus clementina; type=EST; length=658bp
AGGAAGAGATAATAAGGACTTGTCGTAGCATGGGGAAAGCTGTTATTGTG
GCCACCAATATGTTGGAAAGCATGATTGTTCATCCAACTCCAACCAGAGC
AGAGGTCTCAGACATTGCCATTGCTGTCCGAGAGGGTGCTGACGCCGTCA
TGCTTTCTGGAGAAACTGCTCATGGGAAGTTCCCATTGAAAGCCGTGAAA
GTAATGCACACTGTCTCATTACGGACTGAAGCAACCATAACAGGTGGTGC
AATGCCACCAAATCTTGGTCAAGCTTTCAAGAACCACATGAGCGAGATGT
TTGCATACCATGCGACCATGATGTCCAACACGCTTGGAACTTCCATCGTT
GTCTTCACTAGAACTGGTTTTATGGCTATATTACTGAGCCATTATCGACC
TTCTGGCACTATATTTGCCTTCACAAATGAGAAGAGGATTCAGCAAAGGC
TGTCTTTGTATCAAGGAGTTTGCCCCATCTACATGGAGTTCTCAGACGAT
GCTGAAGAAACCTTTGACAATGCCTTAGGTTTATTGCAGAAACAAGGAAT
GGTAAAGGAAGGAGAAGAGGTAGCACTTCTTCAGAGTGGCAGACAACCCA
TCTGGCGGTTCCAATCCACTCACAATATTCAGGTCCGNCAAGTGTAGACA
CAGAGCGG
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