FC875698

Overview
NameFC875698
Unique NameFC875698
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14173 contig Ccv1_Contig14173:2..693. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875698 vs. ExPASy Swiss-Prot
Match: KCS10_ARATH (3-ketoacyl-CoA synthase 10 OS=Arabidopsis thaliana GN=FDH PE=1 SV=2)

HSP 1 Score: 313.538 bits (802), Expect = 6.598e-85
Identity = 159/213 (74.65%), Postives = 186/213 (87.32%), Query Frame = 3
Query:   45 MARS-ERDLLSTEIVNRGIESSGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFAFTLSVYFMSRPRSVYLVDFACYRPPDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELFER 680
            M RS E+DLLSTEIVNRGIE SGPNAGS TFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHA+YLATIPVL+LVFSAEVGSLSREE+W+KLW+   +DLA+V+GFFGVF  T  VYFMSRPRSVYL+DFACY+P D+ KVT+E+FIE+A K  K DE +L F++RI+++SGIGDETY+P+ + S+ EN  TMK GR EAS V+FGALDELFE+
Sbjct:    1 MGRSNEQDLLSTEIVNRGIEPSGPNAGSPTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHAVYLATIPVLVLVFSAEVGSLSREEIWKKLWD---YDLATVIGFFGVFVLTACVYFMSRPRSVYLIDFACYKPSDEHKVTKEEFIELARKSGKFDEETLGFKKRILQASGIGDETYVPRSI-SSSENITTMKEGREEASTVIFGALDELFEK 209          
BLAST of FC875698 vs. ExPASy Swiss-Prot
Match: KCS4_ARATH (3-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana GN=KCS4 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.208e-39
Identity = 85/189 (44.97%), Postives = 124/189 (65.61%), Query Frame = 3
Query:  108 GPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFAFTLSVYFMSRPRSVYLVDFACYRPPDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELF 674
            G   GS+   +R  R LPDFLQSVNLKYVKLGYHYLI++ + L   P L +V S E   ++ ++L ++LW   +++L S++    +  F L+VY M+RPR VYLVDF+CY PPD LK    +F+E +      D+++L+FQR+I++ SG+G++TY+P+ +       ++M   R EA  VMFGALD LF
Sbjct:   13 GGGDGSVGVQIRQTRMLPDFLQSVNLKYVKLGYHYLISNLLTLCLFP-LAVVISVEASQMNPDDL-KQLWIHLQYNLVSIIICSAILVFGLTVYVMTRPRPVYLVDFSCYLPPDHLKAPYARFMEHSRLTGDFDDSALEFQRKILERSGLGEDTYVPEAMHYVPPR-ISMAAAREEAEQVMFGALDNLF 198          
BLAST of FC875698 vs. ExPASy Swiss-Prot
Match: KCS9_ARATH (3-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana GN=KCS9 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.032e-37
Identity = 80/177 (45.20%), Postives = 121/177 (68.36%), Query Frame = 3
Query:  147 RRRLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFAFTLSVYFMSRPRSVYLVDFACYRPPDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELFE 677
            RR+LP+FLQSVN+KYVKLGYHYLI H   L  +P L+ V   E+  L+ ++L++ +W   +++L + +    +  F  +VY MSRPRSVYLVD++CY PP+ L+V  ++F++ +      +E+SL+FQR+I++ SG+G+ETY+P+ +        TM   R E+  VMFGALD+LFE
Sbjct:   22 RRKLPNFLQSVNMKYVKLGYHYLITHLFKLCLVP-LMAVLVTEISRLTTDDLYQ-IWLHLQYNLVAFIFLSALAIFGSTVYIMSRPRSVYLVDYSCYLPPESLQVKYQKFMDHSKLIEDFNESSLEFQRKILERSGLGEETYLPEALHCIPPR-PTMMAAREESEQVMFGALDKLFE 195          
BLAST of FC875698 vs. ExPASy Swiss-Prot
Match: KCS11_ARATH (3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana GN=KCS11 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.922e-37
Identity = 79/177 (44.63%), Postives = 119/177 (67.23%), Query Frame = 3
Query:  150 RRLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFAFTLSVYFMSRPRSVYLVDFACYRPPDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELFER 680
            R LPDF +SV LKYVKLGYHYLI H +YL   P L+LV +A++ + S  +L   LWE  +++L SV+    +  F +++YFM+RPR VYLV+F+C++P +  K T++ F++ +       E +L+FQR+I++ SG+G+ TY+P+ V++   N   MK  R EA  VMFGA+DEL  +
Sbjct:   15 RNLPDFKKSVKLKYVKLGYHYLITHGMYLFLSP-LVLVIAAQISTFSVTDL-RSLWEHLQYNLISVVVCSMLLVFLMTIYFMTRPRPVYLVNFSCFKPDESRKCTKKIFMDRSKLTGSFTEENLEFQRKILQRSGLGESTYLPEAVLNVPPN-PCMKEARKEAETVMFGAIDELLAK 188          
BLAST of FC875698 vs. ExPASy Swiss-Prot
Match: KCS17_ARATH (3-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana GN=KCS17 PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 6.065e-30
Identity = 74/178 (41.57%), Postives = 113/178 (63.48%), Query Frame = 3
Query:  150 RRLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREEL-WEKLWEDTRHDLASVLGFFGVFAFTLSVYFMSRPRSVYLVDFACYRPPDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELFER 680
            ++LP+FL SV LKYVKLGYHYLI++A+Y+  +PV LL  ++   SL+   L +  L +   H L+S L F  +  F  ++YF +RPR ++L+DFACY+P   L  TRE F++ + +     E +L FQ++I++ SG+G +TY P+ ++    N   M   R EA  VMFGA+D + E+
Sbjct:   20 KKLPNFLLSVRLKYVKLGYHYLISNAVYILILPVGLLAATSSSFSLTDLTLLYNHLLKF--HFLSSTL-FAALLIFLTTLYFTTRPRRIFLLDFACYKPDSSLICTRETFMDRSQRVGIFTEDNLAFQQKILERSGLGQKTYFPEALLRVPPN-PCMSEARKEAETVMFGAIDAVLEK 193          
BLAST of FC875698 vs. ExPASy Swiss-Prot
Match: KCS6_ARATH (3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana GN=CUT1 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.035e-29
Identity = 73/177 (41.24%), Postives = 109/177 (61.58%), Query Frame = 3
Query:  156 LPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVL--GFFGVFAFTLSVYFMSRPRSVYLVDFACYRPPDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELFER 680
            +P+F  SV LKYVKLGY YL+NH +    IP++ +V + E+  +  EE+   +W   + DL  VL   FF +F  T  VYFMS+PR++YLVD++CY+PP   +V    F+E +    K    S++FQ RI++ SG+G+ET +P  +        TM   R EA MV+F A+D+LF++
Sbjct:    6 MPEFSSSVKLKYVKLGYQYLVNHFLSFLLIPIMAIV-AVELLRMGPEEILN-VWNSLQFDLVQVLCSSFFVIFIST--VYFMSKPRTIYLVDYSCYKPPVTCRVPFATFMEHSRLILKDKPKSVEFQMRILERSGLGEETCLPPAIHYIPPT-PTMDAARSEAQMVIFEAMDDLFKK 177          
BLAST of FC875698 vs. ExPASy Swiss-Prot
Match: KCS1_ARATH (3-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana GN=KCS1 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.683e-28
Identity = 70/184 (38.04%), Postives = 106/184 (57.61%), Query Frame = 3
Query:  138 VRVRRRLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSRE-ELWEKLWED--TRHDLASVLGFFGVFAFTLSVYFMSRPRSVYLVDFACYRPPDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELFER 680
            +R+RRRLPD L SV LKYVKLG H   N    L  + +L L  +  V       + + +LW +   + D A+ L      +F L++Y  +R + VYLVDF+CY+P D+ K++ + F+ +  +     + ++ FQ+RI   +G+GDETY+P+ + S     + M   R EA  VMFGALD LFE+
Sbjct:   28 IRIRRRLPDLLTSVKLKYVKLGLHNSCNVTTILFFLIILPLTGTVLVQLTGLTFDTFSELWSNQAVQLDTATRLTCLVFLSFVLTLYVANRSKPVYLVDFSCYKPEDERKISVDSFLTMTEENGSFTDDTVQFQQRISNRAGLGDETYLPRGITSTPPK-LNMSEARAEAEAVMFGALDSLFEK 210          
BLAST of FC875698 vs. ExPASy Swiss-Prot
Match: KCS19_ARATH (3-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana GN=KCS19 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.157e-27
Identity = 68/175 (38.86%), Postives = 104/175 (59.43%), Query Frame = 3
Query:  156 LPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFAFTLSVYFMSRPRSVYLVDFACYRPPDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELFER 680
            LP+FL SV LKYVKLGYHYLI++A+Y+  +P+L     A + S +  +L   L+   R    S      +     + YF +RPR V+L+DF+CY+P   L  TRE F++ + +     E +L FQ++I++ SG+G +TY P+ ++    N   M+  R EA  VMFGA+D + E+
Sbjct:   28 LPNFLLSVRLKYVKLGYHYLISNALYILLLPLLAATI-ANLSSFTINDL-SLLYNTLRFHFLSATLATALLISLSTAYFTTRPRRVFLLDFSCYKPDPSLICTRETFMDRSQRVGIFTEDNLAFQQKILERSGLGQKTYFPEALLRVPPN-PCMEEARKEAETVMFGAIDAVLEK 199          
BLAST of FC875698 vs. ExPASy Swiss-Prot
Match: KCS15_ARATH (3-ketoacyl-CoA synthase 15 OS=Arabidopsis thaliana GN=KCS15 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.157e-27
Identity = 76/207 (36.71%), Postives = 114/207 (55.07%), Query Frame = 3
Query:   72 STEIVNRGIESSGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHA-IYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFAFTLSVYFMS------RPRSVYLVDFACYRPPDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDEL 671
            +T++VN G++S  P               PDFL   NL+YVKLGY YL++ +  +   +P LLL+F                          V  F  + AF LS +F+        P SV+L+DF+CYRPPD LK+T+  FIE+A K    +E +++ QR+++  SGIG+E+Y+P+VV       + ++ GR EA+MV+FGA+DEL
Sbjct:    5 ATKMVNGGVKSKSPKGS------------PDFL-GYNLRYVKLGYIYLLSLSRTFCFFLPPLLLLF------------------------IFVSRFLPILAFPLSTFFILLIYHYLTPSSVFLLDFSCYRPPDHLKITKSDFIELAMKSGNFNETAIELQRKVLDQSGIGEESYMPRVVFKPGHR-VNLRDGREEAAMVIFGAIDEL 173          
BLAST of FC875698 vs. ExPASy Swiss-Prot
Match: KCS5_ARATH (3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana GN=KCS5 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.197e-27
Identity = 70/174 (40.23%), Postives = 105/174 (60.34%), Query Frame = 3
Query:  156 LPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFAFTLSVYFMSRPRSVYLVDFACYRPPDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELFE 677
            + DF  SV LKYVKLGY YLIN+ + L  IPV+  V + E+  +  EE+   L      +L  +L    +  F  +VYFMS+PR+VYLVD++CY+PP   +V    F+E +    K +  S++FQ RI++ SG+G+ET +P  +        TM+  R EA MV+F A+++LF+
Sbjct:    1 MSDFSSSVKLKYVKLGYQYLINNFLTLLLIPVIATV-AIELLRMGPEEILSVL-NSLHFELLHILCSSFLIIFVSTVYFMSKPRTVYLVDYSCYKPPVTCRVPFSSFMEHSRLILKDNPKSVEFQMRILERSGLGEETCLPPAIHYIPPT-PTMESARNEAQMVIFTAMEDLFK 171          
The following BLAST results are available for this feature:
BLAST of FC875698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
KCS10_ARATH6.598e-8574.653-ketoacyl-CoA synthase 10 OS=Arabidopsis thaliana... [more]
KCS4_ARATH3.208e-3944.973-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana ... [more]
KCS9_ARATH1.032e-3745.203-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana ... [more]
KCS11_ARATH3.922e-3744.633-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana... [more]
KCS17_ARATH6.065e-3041.573-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana... [more]
KCS6_ARATH1.035e-2941.243-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana ... [more]
KCS1_ARATH9.683e-2838.043-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana ... [more]
KCS19_ARATH2.157e-2738.863-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana... [more]
KCS15_ARATH2.157e-2736.713-ketoacyl-CoA synthase 15 OS=Arabidopsis thaliana... [more]
KCS5_ARATH8.197e-2740.233-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionC31401G12EF CTVClemen1 Citrus clementina cDNA clone C31401G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875698 ID=FC875698; Name=FC875698; organism=Citrus clementina; type=EST; length=692bp
GATTCTTATCAAACTAGATAGCTATAACACATAACATTAACGTCATGGCT
AGAAGTGAACGAGACCTCCTGTCAACTGAAATTGTCAACCGTGGGATCGA
GTCCTCCGGTCCCAATGCCGGTTCTTTGACGTTCTCTGTGAGAGTCCGGA
GACGGCTGCCAGATTTTCTCCAGTCCGTGAACCTCAAGTACGTGAAGCTA
GGGTACCATTACCTCATCAACCATGCCATATATTTGGCCACCATTCCTGT
GTTGTTACTTGTGTTTAGTGCTGAAGTGGGGAGTCTCAGTAGAGAAGAGC
TCTGGGAGAAGCTCTGGGAAGATACCCGCCACGATCTCGCCTCCGTTCTT
GGCTTCTTCGGCGTGTTCGCCTTCACGCTCTCCGTTTACTTCATGTCACG
CCCTCGCTCCGTTTATCTCGTTGATTTTGCTTGCTATCGCCCCCCCGATG
ATCTCAAGGTGACGAGAGAGCAGTTCATCGAAGTGGCGGGAAAATGGAGC
AAGTCCGACGAGGCGAGCTTGGATTTTCAAAGGAGAATAATGAAATCATC
GGGGATTGGAGATGAAACGTACATCCCCAAGGTAGTGATGTCTGCTGAGG
AGAACTGCATGACGATGAAACACGGTCGTTTAGAAGCTTCGATGGTGATG
TTTGGAGCTCTGGACGAGCTATTCGAAAGACTAANGTGAGGC
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