FC876176
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876176 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.212e-27 Identity = 66/153 (43.14%), Postives = 93/153 (60.78%), Query Frame = 2 Query: 215 DGSVMLKLAQSLQNLPSDWSSTSSTGYCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIP 673 D S ML L +SL N PS + S C+WT I C + RVT I + SGL GTLSP++ +L++LE L Q NNI+G +PSL+ SLQ + L NNNF S+P+ F GLT+LQ + + +NP W P L +++L ++AN+ G +P Sbjct: 28 DLSAMLSLKKSL-NPPSSFG-WSDPDPCKWTHIVCTGTKRVTRIQIGHSGLQGTLSPDLRNLSELERLELQWNNISGPVPSLSGLASLQVLMLSNNNFDSIPSDVFQGLTSLQSVEIDNNP-FKSWEIPESLRNASALQNFSANSANVSGSLP 177
BLAST of FC876176 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 9.317e-18 Identity = 57/158 (36.08%), Postives = 81/158 (51.27%), Query Frame = 2 Query: 215 DGSVMLKLAQSLQNLPSD----WSSTSSTGYCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPS-LANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIP 673 DG+ +L L + ++PSD W+++ ST C W G+ CD V T++L+ G+SG PEIS L L+ + N G+IPS L N + L+ I L +N+FT L NL+ LSL N + PFP L L T+Y + G IP Sbjct: 27 DGAALLSLTRHWTSIPSDITQSWNASDSTP-CSWLGVECDRRQFVDTLNLSSYGISGEFGPEISHLKHLKKVVLSGNGFFGSIPSQLGNCSLLEHIDLSSNSFTGNIPDTLGALQNLRNLSLFFNSLIG--PFPESLLSIPHLETVYFTGNGLNGSIP 181
BLAST of FC876176 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.217e-17 Identity = 57/159 (35.85%), Postives = 75/159 (47.17%), Query Frame = 2 Query: 215 DGSVMLKLAQSLQNLPSDWSST-----SSTGYCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPS-LANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIP 673 DG +L L + L +P +ST S C W GI CD+S V +++ +S +SG L PEI L L+ L NN +G IPS L N T L + L N F+ D L L+VL L N P L + L LY+D N+ G IP Sbjct: 32 DGLTLLSLLKHLDRVPPQVTSTWKINASEATPCNWFGITCDDSKNVASLNFTRSRVSGQLGPEIGELKSLQILDLSTNNFSGTIPSTLGNCTKLATLDLSENGFSDKIPDTLDSLKRLEVLYL--YINFLTGELPESLFRIPKLQVLYLDYNNLTGPIP 188
BLAST of FC876176 vs. ExPASy Swiss-Prot
Match: FLS2_ARATH (LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.217e-17 Identity = 52/140 (37.14%), Postives = 79/140 (56.43%), Query Frame = 2 Query: 263 SDWSSTSSTGYCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPS-LANATSLQDIYLDNNNFT-SVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPD 676 SDW+ S +C WTGI CD++ V ++SL + L G LSP I++LT L+ L N+ G IP+ + T L + L N F+ S+P+G ++ L N+ L L + NL P E+ K++SL + D N+ G IP+ Sbjct: 50 SDWTIIGSLRHCNWTGITCDSTGHVVSVSLLEKQLEGVLSPAIANLTYLQVLDLTSNSFTGKIPAEIGKLTELNQLILYLNYFSGSIPSGIWE-LKNIFYLDLRN--NLLSGDVPEEICKTSSLVLIGFDYNNLTGKIPE 186
BLAST of FC876176 vs. ExPASy Swiss-Prot
Match: Y5659_ARATH (Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana GN=At5g16590 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.487e-15 Identity = 55/157 (35.03%), Postives = 85/157 (54.14%), Query Frame = 2 Query: 215 DGSVMLKLAQSLQNLPSDWSSTSSTGYCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAI-PSLANATSLQDIYLDNNNFT-SVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDV 679 D ++ L + P W+ T+ C W G+ C+ S RVT + L GLSG L I +LT+LETLSF+ N + G + P AN T L+ +YL N F+ +P+ F L N+ ++L+ N L P+ + +T L TLY+ + + G IP++ Sbjct: 28 DRRALIALRDGVHGRPLLWNLTAPP--CTWGGVQCE-SGRVTALRLPGVGLSGPLPIAIGNLTKLETLSFRFNALNGPLPPDFANLTLLRYLYLQGNAFSGEIPSFLFT-LPNIIRINLAQNNFLG--RIPDNVNSATRLATLYLQDNQLTGPIPEI 178
BLAST of FC876176 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.328e-15 Identity = 54/160 (33.75%), Postives = 79/160 (49.38%), Query Frame = 2 Query: 218 GSVMLKLAQSLQNLP---SDWSSTSSTGYCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDVFY 685 G + L SL+ LP SDW+ + C W+ + CD+ N VT+++L+ SGTLS + L L+TL+ + N I G IP N TSL + L++N T L LQ L+LS N P LT +L L +D+ ++ G IP + Sbjct: 31 GDALFALRISLRALPNQLSDWNQ-NQVNPCTWSQVICDDKNFVTSLTLSDMNFSGTLSSRVGILENLKTLTLKGNGITGEIPEDFGNLTSLTSLDLEDNQLTGRIPSTIGNLKKLQFLTLSRNK--LNGTIPESLTGLPNLLNLLLDSNSLSGQIPQSLF 187
BLAST of FC876176 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.328e-15 Identity = 51/136 (37.50%), Postives = 70/136 (51.47%), Query Frame = 2 Query: 296 CEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAI-PSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDVFYSFFNL 700 C WT I+C + N V + LSGTLS I +LT L +S Q NNI+G I P + + LQ + L NN F+ G + L+NLQ L L N N PFP L++ L+ L + N+ G +P FN+ Sbjct: 63 CSWTMISCSSDNLVIGLGAPSQSLSGTLSGSIGNLTNLRQVSLQNNNISGKIPPEICSLPKLQTLDLSNNRFSGEIPGSVNQLSNLQYLRL--NNNSLSGPFPASLSQIPHLSFLDLSYNNLRGPVPKFPARTFNV 196
BLAST of FC876176 vs. ExPASy Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.328e-15 Identity = 63/182 (34.62%), Postives = 87/182 (47.80%), Query Frame = 2 Query: 161 ICAVVXXXXXXXXXXXGDDGSVMLKLAQSLQNLP----SDWS-STSSTGYCE--WTGINCDNS-NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPS-LANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDV 679 +C++ DG +L L + +P S W +TS T C W G+ CD S N V T++L+ SGLSG L EI L L TL +N+ +G +PS L N TSL+ + L NN+F+ F L NL L L D NL+ P + L L M N+ G IP++ Sbjct: 12 LCSLFVYFRIDSVSSLNSDGLALLSLLKHFDKVPLEVASTWKENTSETTPCNNNWFGVICDLSGNVVETLNLSASGLSGQLGSEIGELKSLVTLDLSLNSFSGLLPSTLGNCTSLEYLDLSNNDFSGEVPDIFGSLQNLTFLYL-DRNNLSGL-IPASVGGLIELVDLRMSYNNLSGTIPEL 191
BLAST of FC876176 vs. ExPASy Swiss-Prot
Match: Y3288_ARATH (Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana GN=At3g02880 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.259e-14 Identity = 52/158 (32.91%), Postives = 89/158 (56.33%), Query Frame = 2 Query: 215 DGSVMLKLAQSLQNLPSDWSSTSSTGYCEWTGINCDNSNRVTTISLAKSGLSGTLS-PEISSLTQLETLSFQMNNIAGAIPS-LANATSLQDIYLDNNNFTS-VPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDV 679 D +L + S++ P W+ ++S+ C W G++CD + RVT + L SGL G+L I +LTQL+TLS + N+++G IPS +N L+ +YL N F+ +P+ F T ++ ++ N P+ + +T L TLY++ + G IP++ Sbjct: 29 DRRALLAVRNSVRGRPLLWNMSASSP-CNWHGVHCD-AGRVTALRLPGSGLFGSLPIGGIGNLTQLKTLSLRFNSLSGPIPSDFSNLVLLRYLYLQGNAFSGEIPSLLF---TLPSIIRINLGENKFSGRIPDNVNSATRLVTLYLERNQLSGPIPEI 181
BLAST of FC876176 vs. ExPASy Swiss-Prot
Match: Y1848_ARATH (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.066e-13 Identity = 50/157 (31.85%), Postives = 83/157 (52.87%), Query Frame = 2 Query: 215 DGSVMLKLAQSLQNLPSDWSSTSSTGYCEWTGINCDNSNRVTTISLAKSGLSGTLSPEI-SSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDV 679 D + +L L ++ W+ T C W G+ C+ SNRVT + L LSG + I +LTQL TLS ++N ++G++P L+ +++L+ +YL N F+ L++L L+L+ N + T T L TL+++N + G IPD+ Sbjct: 36 DRTALLSLRSAVGGRTFRWN-IKQTSPCNWAGVKCE-SNRVTALRLPGVALSGDIPEGIFGNLTQLRTLSLRLNALSGSLPKDLSTSSNLRHLYLQGNRFSGEIPEVLFSLSHLVRLNLASNSFTG--EISSGFTNLTKLKTLFLENNQLSGSIPDL 188 The following BLAST results are available for this feature:
BLAST of FC876176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876176 ID=FC876176; Name=FC876176; organism=Citrus clementina; type=EST; length=700bpback to top |