FC876187
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876187 vs. ExPASy Swiss-Prot
Match: FPPS1_LUPAL (Farnesyl pyrophosphate synthetase 1 OS=Lupinus albus GN=FPS1 PE=2 SV=1) HSP 1 Score: 363.229 bits (931), Expect = 7.663e-100 Identity = 176/205 (85.85%), Postives = 185/205 (90.24%), Query Frame = 2 Query: 116 MSDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSN-----HRRIVQYKTAYYSFYLPVACALL 715 M+DL+S F+ VY VLK ELL+DPAFEF DSRQW+DRMLDYNVPGGKLNRGLSV+DSYRLLK+G EL DDE FL+SALGWCIEWLQAYFLVLDDIMD SHTRRGQPCWFRVPKVGMIAANDGVLLRNHI RILK HFR KPYY DLLDLFNEVEFQTASGQMIDLITT+EGEKDLS HRRIVQYKTAYYSFYLPVACALL Sbjct: 1 MADLRSTFLNVYSVLKSELLHDPAFEFSPDSRQWLDRMLDYNVPGGKLNRGLSVIDSYRLLKDGHELNDDEIFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGMIAANDGVLLRNHIPRILKKHFRGKPYYADLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTAYYSFYLPVACALL 205
BLAST of FC876187 vs. ExPASy Swiss-Prot
Match: FPPS_HELAN (Farnesyl pyrophosphate synthetase OS=Helianthus annuus GN=FPS1 PE=2 SV=1) HSP 1 Score: 359.377 bits (921), Expect = 1.107e-98 Identity = 174/204 (85.29%), Postives = 186/204 (91.18%), Query Frame = 2 Query: 119 SDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSN-----HRRIVQYKTAYYSFYLPVACALL 715 SDLKS+F+ VY LK ELLNDPAFEF HDSRQW+D+MLDYNVPGGKLNRGLSVVDSY+LLK G ELTDDE FL+SALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFR+PKVGMIAANDG++LRNH+ RILK HFR KPYYVDL+DLFNEVEFQTASGQMIDLITT+ GEKDLS HRRIVQYKTAYYSFYLPVACALL Sbjct: 3 SDLKSKFLHVYQTLKSELLNDPAFEFHHDSRQWIDKMLDYNVPGGKLNRGLSVVDSYQLLK-GAELTDDEIFLASALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRLPKVGMIAANDGLILRNHVPRILKKHFRGKPYYVDLVDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLSIHRRIVQYKTAYYSFYLPVACALL 205
BLAST of FC876187 vs. ExPASy Swiss-Prot
Match: FPPS2_LUPAL (Farnesyl pyrophosphate synthetase 2 OS=Lupinus albus GN=FPS2 PE=2 SV=1) HSP 1 Score: 355.14 bits (910), Expect = 2.087e-97 Identity = 171/205 (83.41%), Postives = 183/205 (89.27%), Query Frame = 2 Query: 116 MSDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSN-----HRRIVQYKTAYYSFYLPVACALL 715 M+D KS F+ VY +LK ELL DPAFEF DSRQWV+RMLDYNVPGGKLNRGLSV+DSY+LLK+G+EL D+E FL+SALGWCIEWLQAYFLVLDDIMD SHTRRG PCWFRVPKVGMIA NDGV+LRNHI RILK HFR KPYYVDLLDLFNEVEFQTASGQMIDLITT+EGEKDLS HRRIVQYKTAYYSFYLPVACALL Sbjct: 1 MADPKSSFLNVYSILKSELLQDPAFEFSTDSRQWVERMLDYNVPGGKLNRGLSVIDSYKLLKDGQELNDEEIFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGHPCWFRVPKVGMIAPNDGVVLRNHIPRILKKHFRGKPYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTAYYSFYLPVACALL 205
BLAST of FC876187 vs. ExPASy Swiss-Prot
Match: FPPS_ARTAN (Farnesyl pyrophosphate synthetase OS=Artemisia annua GN=FPS1 PE=2 SV=1) HSP 1 Score: 353.599 bits (906), Expect = 6.072e-97 Identity = 171/204 (83.82%), Postives = 186/204 (91.18%), Query Frame = 2 Query: 119 SDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSN-----HRRIVQYKTAYYSFYLPVACALL 715 +DLKS+F++VY LK EL+NDPAFEFD DSRQW+++MLDYNVPGGKLNRGLSVVDSY+LLK G EL+DDE FLSSALGWCIEWLQAYFLVLDDIMD SHTRRGQPCWFR+PKVGMIAANDG+LLRNH+ RILK HFR KPYYVDL+DLFNEVEFQTASGQMIDLITT+ GEKDLS HRRIVQYKTAYYSFYLPVACALL Sbjct: 4 TDLKSKFLKVYDTLKSELINDPAFEFDDDSRQWIEKMLDYNVPGGKLNRGLSVVDSYQLLKGG-ELSDDEIFLSSALGWCIEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMIAANDGILLRNHVPRILKKHFRGKPYYVDLVDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLSIHRRIVQYKTAYYSFYLPVACALL 206
BLAST of FC876187 vs. ExPASy Swiss-Prot
Match: FPPS1_PARAR (Farnesyl pyrophosphate synthetase 1 OS=Parthenium argentatum GN=FPS1 PE=2 SV=1) HSP 1 Score: 351.288 bits (900), Expect = 3.013e-96 Identity = 170/204 (83.33%), Postives = 186/204 (91.18%), Query Frame = 2 Query: 119 SDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSN-----HRRIVQYKTAYYSFYLPVACALL 715 SDLKSRF++VY LK EL+NDPAFEFD DSRQWV++MLDYNVPGGKLNRGLSV+DSY+LLK G ELTD+E FL++ALGWCIEWLQAYFLVLDDIMD SHTRRGQPCWFR+PKVGMIAANDG++LRN++ RILK HFR KPYYVDLLDLFNEVEFQTASGQMIDLITT+ GEKDLS HRRIVQYKTAYYSFYLPVACALL Sbjct: 3 SDLKSRFLQVYDTLKSELINDPAFEFDDDSRQWVEKMLDYNVPGGKLNRGLSVIDSYQLLKGG-ELTDNEIFLAAALGWCIEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMIAANDGIILRNNVPRILKKHFRGKPYYVDLLDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLSIHRRIVQYKTAYYSFYLPVACALL 205
BLAST of FC876187 vs. ExPASy Swiss-Prot
Match: FPPS2_PARAR (Farnesyl pyrophosphate synthetase 2 OS=Parthenium argentatum GN=FPS2 PE=2 SV=1) HSP 1 Score: 348.206 bits (892), Expect = 2.551e-95 Identity = 165/204 (80.88%), Postives = 185/204 (90.69%), Query Frame = 2 Query: 119 SDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSN-----HRRIVQYKTAYYSFYLPVACALL 715 +D++S+F++VY LK EL+NDPAFEFD DSRQW+++MLDYNVPGGKLNRGLSV+DSY+LLK GK LTDDE F +SALGWC+EWLQAYFLVLDDIMD SHTRRGQPCWFR+PKVGMIAANDG++LRNH+ RILK HFR KPYYVDL+DLFNEVEFQTASGQMIDLITT+ GEKDLS HRRIVQYKTAYYSFYLPVACALL Sbjct: 3 TDIRSKFLQVYDTLKSELINDPAFEFDDDSRQWIEKMLDYNVPGGKLNRGLSVIDSYQLLKGGK-LTDDEIFHASALGWCVEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMIAANDGIILRNHVPRILKKHFRGKPYYVDLVDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLSIHRRIVQYKTAYYSFYLPVACALL 205
BLAST of FC876187 vs. ExPASy Swiss-Prot
Match: FPPS2_ARATH (Farnesyl pyrophosphate synthetase 2 OS=Arabidopsis thaliana GN=FPS2 PE=2 SV=1) HSP 1 Score: 339.732 bits (870), Expect = 9.073e-93 Identity = 163/205 (79.51%), Postives = 181/205 (88.29%), Query Frame = 2 Query: 116 MSDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSN-----HRRIVQYKTAYYSFYLPVACALL 715 M+DLKS F++VY VLK +LL DP+FEF H+SRQW++RMLDYNV GGKLNRGLSVVDSY+LLK+G++LT+ E FLS ALGWCIEWLQAYFLVLDDIMD S TRRGQPCWFR PKVGMIA NDG+LLRNHI RILK HFR+ PYYVDL+DLFNEVEFQTA GQMIDLITT +GEKDLS HRRIV+YKTAYYSFYLPVACALL Sbjct: 1 MADLKSTFLDVYSVLKSDLLQDPSFEFTHESRQWLERMLDYNVRGGKLNRGLSVVDSYKLLKQGQDLTEKETFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRKPKVGMIAINDGILLRNHIHRILKKHFREMPYYVDLVDLFNEVEFQTACGQMIDLITTFDGEKDLSKYSLQIHRRIVEYKTAYYSFYLPVACALL 205
BLAST of FC876187 vs. ExPASy Swiss-Prot
Match: FPPS1_ARATH (Farnesyl pyrophosphate synthetase 1, mitochondrial OS=Arabidopsis thaliana GN=FPS1 PE=2 SV=2) HSP 1 Score: 336.65 bits (862), Expect = 7.681e-92 Identity = 163/204 (79.90%), Postives = 179/204 (87.75%), Query Frame = 2 Query: 119 SDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKD-----LSNHRRIVQYKTAYYSFYLPVACALL 715 +DLKS F+ VY VLK +LL+DP+FEF ++SR WVDRMLDYNV GGKLNRGLSVVDS++LLK+G +LT+ E FLS ALGWCIEWLQAYFLVLDDIMD S TRRGQPCWFRVP+VGM+A NDG+LLRNHI RILK HFRDKPYYVDL+DLFNEVE QTA GQMIDLITT EGEKD LS HRRIVQYKTAYYSFYLPVACALL Sbjct: 44 TDLKSTFLNVYSVLKSDLLHDPSFEFTNESRLWVDRMLDYNVRGGKLNRGLSVVDSFKLLKQGNDLTEQEVFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPQVGMVAINDGILLRNHIHRILKKHFRDKPYYVDLVDLFNEVELQTACGQMIDLITTFEGEKDLAKYSLSIHRRIVQYKTAYYSFYLPVACALL 247
BLAST of FC876187 vs. ExPASy Swiss-Prot
Match: FPPS_MAIZE (Farnesyl pyrophosphate synthetase OS=Zea mays GN=FPS PE=2 SV=1) HSP 1 Score: 316.62 bits (810), Expect = 8.225e-86 Identity = 150/203 (73.89%), Postives = 172/203 (84.73%), Query Frame = 2 Query: 122 DLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSN-----HRRIVQYKTAYYSFYLPVACALL 715 D ++ F +Y LK+ELL DPAFEF +SRQW+DRM+DYNV GGK NRGLSVVDSY+LLK L ++E FL+ LGWCIEWLQA+FLVLDDIMD SHTRRGQPCWFRVP+VG+IAANDG++LRNHISRIL+ HF+ KPYY DLLDLFNEVEF+TASGQ++DLITT EGEKDL+ H RIVQYKTAYYSFYLPVACALL Sbjct: 11 DTRAAFARIYKTLKEELLTDPAFEFTEESRQWIDRMVDYNVLGGKCNRGLSVVDSYKLLKGADALGEEETFLACTLGWCIEWLQAFFLVLDDIMDDSHTRRGQPCWFRVPQVGLIAANDGIILRNHISRILRRHFKGKPYYADLLDLFNEVEFKTASGQLLDLITTHEGEKDLTKYNITVHGRIVQYKTAYYSFYLPVACALL 213
BLAST of FC876187 vs. ExPASy Swiss-Prot
Match: CPPAS_TANCI (Chrysanthemyl diphosphate synthase, chloroplastic OS=Tanacetum cinerariifolium PE=1 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 2.477e-82 Identity = 146/204 (71.57%), Postives = 173/204 (84.80%), Query Frame = 2 Query: 119 SDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSNH-----RRIVQYKTAYYSFYLPVACALL 715 S+L S+F++VY LK EL++DP+FEFD DSRQWV+RM+DYNVPGGK+ RG SVVDSY+LLK G+ELT+DE FL+ ALGWC EWLQA+ LVLDDIMDGSHTRRGQPCWFR+P+VG++A NDGVLLRNH+ RILK +F+ KPYYV LLDLFNE EFQT SGQMID I + G+KDLS + RRIVQYK +YYS YLP+ACALL Sbjct: 56 SNLDSQFMQVYETLKSELIHDPSFEFDDDSRQWVERMIDYNVPGGKMVRGYSVVDSYQLLK-GEELTEDEAFLACALGWCTEWLQAFILVLDDIMDGSHTRRGQPCWFRLPEVGVVAINDGVLLRNHVHRILKKYFQGKPYYVHLLDLFNETEFQTISGQMIDTICRLAGQKDLSKYTMTLNRRIVQYKGSYYSCYLPIACALL 258 The following BLAST results are available for this feature:
BLAST of FC876187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876187 ID=FC876187; Name=FC876187; organism=Citrus clementina; type=EST; length=717bpback to top |