FC876205

Overview
NameFC876205
Unique NameFC876205
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB1_RALSO (L-aspartate oxidase 1 OS=Ralstonia solanacearum GN=nadB1 PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.549e-60
Identity = 126/239 (52.72%), Postives = 157/239 (65.69%), Query Frame = 1
Query:    1 GGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTT--LDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711
            GGH H RI+HAAD TG  +   L++ V + PNI++ E HFAIDL+T   L  P   CHG+  L+ +  +V   I+  T+LA+GGAG +Y  TTNP  ATGDG+AMA RA   ++NMEF+QFHPT L               SFLI+EAVRG+GG L      RFMP +DER+ELAPRD+VAR+ID ++KKR    V LDISH+    I  HFP I A CL+ G+DITRQPIP  PAAHY
Sbjct:  114 GGHRHRRIIHAADATGHAVVTTLVDKVRAHPNITLLEDHFAIDLVTDAKLGLPGMRCHGLYVLDCKRGDVKTIIASQTVLATGGAGKVYLYTTNPDTATGDGIAMAWRAGCRVANMEFIQFHPTCLYHPFA---------KSFLISEAVRGEGGKLVLPDGTRFMPAHDERAELAPRDIVARAIDFEMKKRGLDCVYLDISHQSPAFIQEHFPTILARCLELGIDITRQPIPVVPAAHY 343          
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_PSEAE (L-aspartate oxidase OS=Pseudomonas aeruginosa GN=nadB PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.270e-54
Identity = 117/239 (48.95%), Postives = 148/239 (61.92%), Query Frame = 1
Query:    1 GGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTT--LDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711
            GGHSH RI+HAAD TG  I   LL      PNI +     A+DL+T   L  P   C G   LN E+ EV  F ++ ++LASGGA  +Y  T+NP   +GDG+AMA RA   + N+EF QFHPT L            +  SFLITEA+RG+G +L     ERFMP +D R ELAPRD+VAR+ID ++K+     V LDISH+P E I +HFP +   CL +G+DIT+QPIP  PAAHY
Sbjct:  123 GGHSHRRIIHAADATGAAIFNTLLAQARRRPNIELLSQRVAVDLITERKLGLPSKRCLGAYVLNRESGEVDTFRARFSVLASGGASKVYLYTSNPDGNSGDGIAMAWRAGCRVGNLEFNQFHPTCLYHP---------QAKSFLITEALRGEGALLRLPNGERFMPRFDPRGELAPRDIVARAIDHEMKRLGIDCVYLDISHKPAEFIKAHFPTVYERCLDFGIDITQQPIPVVPAAHY 352          
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_NEIMB (L-aspartate oxidase OS=Neisseria meningitidis serogroup B GN=nadB PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.189e-52
Identity = 114/238 (47.90%), Postives = 149/238 (62.61%), Query Frame = 1
Query:    1 GGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECL-KYGLDITRQPIPCGPAAHY 711
            GGH+  RI H AD TG  + ++L+  +   PNI V E   A+D+ T      A C G+  L+  TQE  R  ++ T+LA GG G IY +TT P   TGD +AMA RA   + N+EF+QFHPT LA      +P +    +FLI+EAVRG+GGIL N   ERFMP YD R+ELAPRD+VAR+I  ++ K+ + +V LDISH+P   +  HFP+I   CL + GLDITRQ IP  P  HY
Sbjct:  113 GGHTCRRIAHVADYTGEAVMQSLIAQIRRRPNIRVCERQMALDIQTE---SGAAC-GLTVLDCRTQETYRIRARHTVLAGGGLGQIYAATTTPPECTGDAIAMAIRAGCAVGNLEFIQFHPTGLA------RPSENGR-TFLISEAVRGEGGILTNQAGERFMPHYDRRAELAPRDIVARAIAAEIAKQTQDFVSLDISHQPAAFVRRHFPSIHRHCLSQCGLDITRQAIPVRPVQHY 339          
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_NEIMA (L-aspartate oxidase OS=Neisseria meningitidis serogroup A GN=nadB PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.460e-52
Identity = 114/240 (47.50%), Postives = 149/240 (62.08%), Query Frame = 1
Query:    1 GGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTREN--SFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECL-KYGLDITRQPIPCGPAAHY 711
            GGH+  RI H AD TG  + ++L+  +   PNI V+E   A+D+ T      A C G+  L+  TQE     +  T+LA GG G IY +TT P   TGD +AMA RA   + N+EF+QFHPT LA         ++ EN  +FLI+EAVRG+GGIL N   ERFMP YD R+ELAPRD+VAR+I  ++ K+ + +V LDISH+P   +  HFP+I   CL + GLDITRQ IP  P  HY
Sbjct:  113 GGHTCRRIAHVADYTGEAVMQSLIVQIRRRPNIRVYERQMALDIQTE---SGAAC-GLTVLDRRTQETYNIRASHTVLAGGGLGQIYAATTTPPECTGDAIAMAIRAGCAVENLEFIQFHPTGLA---------RSSENGRTFLISEAVRGEGGILTNQAGERFMPHYDRRAELAPRDIVARAIAAEIAKQTQDFVSLDISHQPAAFVRRHFPSIHRHCLSQCGLDITRQAIPVRPVQHY 339          
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_SALTI (L-aspartate oxidase OS=Salmonella typhi GN=nadB PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.243e-51
Identity = 111/241 (46.06%), Postives = 150/241 (62.24%), Query Frame = 1
Query:    1 GGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTT----LDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711
            GGHSH RI+HAAD TG+E+E  L+    + PNI V E   A+DL+ +    L GP  V  G    N   + V    +K  +LA+GGA  +Y  TTNP +++GDG+AMA RA   ++N+EF QFHPTAL            +  +FL+TEA+RG+G  L      RFMP  DER ELAPRD+VAR+ID ++K+     + LDISH+P + +  HFP I A+ L  G+D+T++PIP  PAAHY
Sbjct:  122 GGHSHRRILHAADATGKEVETTLVSRAQNHPNIQVLERSNAVDLIISDKIGLPGPRRVV-GAWIWNRNKEWVETCHAKSVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANLEFNQFHPTALYHP---------QARNFLLTEALRGEGAYLKRPDGSRFMPDVDERGELAPRDIVARAIDHEMKRLGADCMFLDISHKPDDFVRQHFPMIYAKLLDLGMDLTKEPIPIVPAAHY 352          
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_ECOLI (L-aspartate oxidase OS=Escherichia coli (strain K12) GN=nadB PE=1 SV=4)

HSP 1 Score: 202.216 bits (513), Expect = 2.243e-51
Identity = 112/242 (46.28%), Postives = 151/242 (62.40%), Query Frame = 1
Query:    1 GGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTT----LDGPDAVCHG-VDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711
            GGHSH RI+HAAD TGRE+E  L+   ++ PNI V E   A+DL+ +    L G   V    V   N ET E     +K  +LA+GGA  +Y  TTNP +++GDG+AMA RA   ++N+EF QFHPTAL            +  +FL+TEA+RG+G  L      RFMP +DER ELAPRD+VAR+ID ++K+     + LDISH+P + I  HFP I  + L  G+D+T++P+P  PAAHY
Sbjct:  122 GGHSHRRILHAADATGREVETTLVSKALNHPNIRVLERSNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCH--AKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANLEFNQFHPTALYHP---------QARNFLLTEALRGEGAYLKRPDGTRFMPDFDERGELAPRDIVARAIDHEMKRLGADCMFLDISHKPADFIRQHFPMIYEKLLGLGIDLTQEPVPIVPAAHY 352          
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_SALTY (L-aspartate oxidase OS=Salmonella typhimurium GN=nadB PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.929e-51
Identity = 111/241 (46.06%), Postives = 150/241 (62.24%), Query Frame = 1
Query:    1 GGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTT----LDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711
            GGHSH RI+HAAD TG+E+E  L+    + PNI V E   A+DL+ +    L GP  V  G    N   + V    +K  +LA+GGA  +Y  TTNP +++GDG+AMA RA   ++N+EF QFHPTAL            +  +FL+TEA+RG+G  L      RFMP  DER ELAPRD+VAR+ID ++K+     + LDISH+P + +  HFP I A+ L  G+D+T++PIP  PAAHY
Sbjct:  122 GGHSHRRILHAADATGKEVETTLVSRAQNHPNIQVLERSNAVDLIISDKMGLPGPRRVV-GAWIWNRNKEWVETCHAKSVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANLEFNQFHPTALYHP---------QARNFLLTEALRGEGAYLKRPDGSRFMPDVDERGELAPRDIVARAIDHEMKQLGADCMFLDISHKPDDFVRQHFPMIYAKLLDLGMDLTKEPIPVVPAAHY 352          
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_ECO57 (L-aspartate oxidase OS=Escherichia coli O157:H7 GN=nadB PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.113e-50
Identity = 109/241 (45.23%), Postives = 150/241 (62.24%), Query Frame = 1
Query:    1 GGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTT----LDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711
            GGHSH RI+HAAD TGRE+E  L+   ++ PNI V E   A+DL+ +    L G   V  G    N   ++V    +K  +LA+GGA  +Y  TTNP +++GDG+AMA RA   ++N+EF QFHPTAL            +  +FL+TEA+RG+G  L      RFMP +D R ELAPRD+VAR+ID ++K+     + LDISH+P + I  HFP I  + L  G+D+T++P+P  PAAHY
Sbjct:  122 GGHSHRRILHAADATGREVETTLVSKALNHPNIRVLERSNAVDLIISDKIGLPGTRRVV-GAWVWNRNKEKVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANLEFNQFHPTALYHP---------QARNFLLTEALRGEGAYLKRPDGTRFMPDFDVRGELAPRDIVARAIDHEMKRLGADCMFLDISHKPADFIRQHFPMIYEKLLGLGIDLTQEPVPIVPAAHY 352          
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_YERPE (L-aspartate oxidase OS=Yersinia pestis GN=nadB PE=3 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 1.454e-50
Identity = 109/241 (45.23%), Postives = 151/241 (62.66%), Query Frame = 1
Query:    1 GGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTT----LDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711
            GGHSH RI+H AD TG+E+E  L+    + PNISV E   A+DL+T+    L G   V  G    N E ++V  F +K  +LA+GGA  +Y  TTNP +++GDG+AMA RA   ++N+EF QFHPT L            +  +FL+TEA+RG+G  L      RFM  +D R ELAPRD+VAR+ID ++K+     + LDISH+PT+ ++ HFP I  + L  G+D+T++ IP  PAAHY
Sbjct:  122 GGHSHRRILHTADATGKEVETTLVGKASNHPNISVKERCNAVDLITSNKIGLAGTKRVV-GAYVWNRELEKVETFRAKAVVLATGGAAKVYQYTTNPDISSGDGIAMAWRAGCRVANLEFNQFHPTCLFHP---------QARNFLLTEALRGEGAYLKRPDGSRFMLDFDPRGELAPRDIVARAIDHEMKRLGADCMYLDISHKPTDFVMQHFPMIYEKLLSLGIDLTKEAIPIVPAAHY 352          
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_VIBCH (L-aspartate oxidase OS=Vibrio cholerae GN=nadB PE=3 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 3.238e-50
Identity = 106/239 (44.35%), Postives = 148/239 (61.92%), Query Frame = 1
Query:    1 GGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTT--LDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711
            GGHSH RI+HAAD TG  ++ +L +   + PNI+V E H A+DL+T   + G      G    N   + V    +K  +LA+GGA  +Y  T+NP V++GDG+AMA RA   ++N+EF QFHPT L               +FL+TEA+RG+G  L      RFMP +DER+ELAPRD+VAR+ID ++K+     + LDISH+P + I  HFP I +  +  G+D+T++PIP  PAAHY
Sbjct:  123 GGHSHRRILHAADATGMAMQTSLQDNAHNHPNITVLERHNALDLITEDKIGGDANKVVGAYVWNRNAEHVETIRAKFVVLATGGASKVYQYTSNPDVSSGDGIAMAWRAGCRVANLEFNQFHPTCLYHP---------EARNFLLTEALRGEGAYLRRPDGSRFMPDFDERAELAPRDIVARAIDFEMKRLGADCMYLDISHKPADFIEKHFPTIYSRLMDLGIDMTKEPIPIVPAAHY 352          
The following BLAST results are available for this feature:
BLAST of FC876205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
NADB1_RALSO1.549e-6052.72L-aspartate oxidase 1 OS=Ralstonia solanacearum GN... [more]
NADB_PSEAE1.270e-5448.95L-aspartate oxidase OS=Pseudomonas aeruginosa GN=n... [more]
NADB_NEIMB1.189e-5247.90L-aspartate oxidase OS=Neisseria meningitidis sero... [more]
NADB_NEIMA3.460e-5247.50L-aspartate oxidase OS=Neisseria meningitidis sero... [more]
NADB_SALTI2.243e-5146.06L-aspartate oxidase OS=Salmonella typhi GN=nadB PE... [more]
NADB_ECOLI2.243e-5146.28L-aspartate oxidase OS=Escherichia coli (strain K1... [more]
NADB_SALTY2.929e-5146.06L-aspartate oxidase OS=Salmonella typhimurium GN=n... [more]
NADB_ECO571.113e-5045.23L-aspartate oxidase OS=Escherichia coli O157:H7 GN... [more]
NADB_YERPE1.454e-5045.23L-aspartate oxidase OS=Yersinia pestis GN=nadB PE=... [more]
NADB_VIBCH3.238e-5044.35L-aspartate oxidase OS=Vibrio cholerae GN=nadB PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32001F10EF DevOvary1 Citrus clementina cDNA clone C32001F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876205 ID=FC876205; Name=FC876205; organism=Citrus clementina; type=EST; length=712bp
GGGGGACACTCCCATCACAGAATCGTCCATGCTGCAGATATGACTGGAAG
GGAGATCGAGCGGGCTCTTTTGGAAGCTGTTGTCAGTGACCCTAATATCT
CAGTGTTCGAGCATCACTTTGCGATAGATTTGCTAACTACTCTGGATGGT
CCTGATGCAGTTTGTCACGGTGTTGACACTTTAAATGTTGAAACACAAGA
GGTGGTACGATTCATTTCAAAGGTGACCTTACTTGCATCAGGTGGAGCTG
GGCATATTTATCCATCGACAACAAATCCTCTGGTGGCCACTGGAGATGGG
ATGGCTATGGCCCACCGAGCTCAAGCAGTGATTTCAAACATGGAATTTGT
GCAGTTCCACCCAACTGCCTTAGCTGATGAGGGCCTTCCCATCAAACCAA
AGAAAACTCGAGAGAATTCATTTCTCATCACTGAAGCTGTCAGGGGTGAT
GGAGGCATCCTTTACAATTTAGGCATGGAACGGTTCATGCCCCTGTATGA
TGAGAGATCTGAGCTTGCTCCTAGGGATGTGGTGGCAAGAAGTATAGATG
ACCAGCTTAAAAAGCGTAATGAGAAGTATGTGCTCCTTGATATAAGTCAC
AGGCCCACGGAAAAAATACTGTCCCACTTTCCCAACATAGCTGCTGAATG
CCTTAAGTATGGACTGGACATAACCCGCCAGCCAATTCCCTGTGGTCCTG
CTGCACATTACA
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