FC876229
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876229 vs. ExPASy Swiss-Prot
Match: ILV5_ARATH (Ketol-acid reductoisomerase, chloroplastic OS=Arabidopsis thaliana GN=At3g58610 PE=2 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 7.746e-40 Identity = 84/121 (69.42%), Postives = 97/121 (80.17%), Query Frame = 1 Query: 112 NLAFFSSTAKSLRALKTT----RGRGSALGAQMASETALKTPFLLDFETSVFKKDAISLANRDEFIVRGGRDLFKLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR 462 N+ F SS++KSLR+L T GS+L A+M S +A+K P LDFETSVFKK+ +SLA +E+IVRGGRDLFK LPDAF GI QIGVIGWGSQGPAQAQNLRDSL EAKSDIVVK+GLR Sbjct: 36 NIGFLSSSSKSLRSLTATVAGNGATGSSLAARMVSSSAVKAPVSLDFETSVFKKEKVSLAGYEEYIVRGGRDLFKHLPDAFKGIKQIGVIGWGSQGPAQAQNLRDSLVEAKSDIVVKIGLR 156
BLAST of FC876229 vs. ExPASy Swiss-Prot
Match: ILV5_PEA (Ketol-acid reductoisomerase, chloroplastic OS=Pisum sativum GN=PGAAIR PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 5.196e-36 Identity = 80/122 (65.57%), Postives = 92/122 (75.41%), Query Frame = 1 Query: 97 AFKHLNLAFFSSTAKSLRALKTTRGRGSALGAQMASETALKTPFLLDFETSVFKKDAISLANRDEFIVRGGRDLFKLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR 462 +F NL+F + +S+RA ++ GSALGA S P LDFETSVFKK+ ++LA +E+IVRGGRDLF LLPDAF GI QIGVIGWGSQGPAQAQNLRDSL EAKSDIVVKVGLR Sbjct: 26 SFAPTNLSFSKLSPQSIRARRSITV-GSALGATKVSAPPATHPVSLDFETSVFKKERVNLAGHEEYIVRGGRDLFHLLPDAFKGIKQIGVIGWGSQGPAQAQNLRDSLVEAKSDIVVKVGLR 146
BLAST of FC876229 vs. ExPASy Swiss-Prot
Match: ILV5_SPIOL (Ketol-acid reductoisomerase, chloroplastic OS=Spinacia oleracea GN=AHRI PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 2.579e-35 Identity = 80/129 (62.02%), Postives = 95/129 (73.64%), Query Frame = 1 Query: 109 LNLAFF--SSTAKSLRALKTTR-------GRGSALGAQMASETALKTPFL--LDFETSVFKKDAISLANRDEFIVRGGRDLFKLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR 462 LNL F SST K+ R+LK R G GSAL AQM S ++ TP DF++SVFKK+ ++L+ DE+IVRGGR+LF LLPDAF GI QIGVIGWGSQ PAQAQNL+DSL EAKSD+VVK+GLR Sbjct: 34 LNLGFLGSSSTIKACRSLKAARVLPSGANGGGSALSAQMVSAPSINTPSATTFDFDSSVFKKEKVTLSGHDEYIVRGGRNLFPLLPDAFKGIKQIGVIGWGSQAPAQAQNLKDSLTEAKSDVVVKIGLR 162
BLAST of FC876229 vs. ExPASy Swiss-Prot
Match: ILV5_ORYSJ (Ketol-acid reductoisomerase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os05g0573700 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 4.260e-30 Identity = 69/105 (65.71%), Postives = 79/105 (75.24%), Query Frame = 1 Query: 148 RALKTTRGRGSALGAQMASETALKTPFLLDFETSVFKKDAISLANRDEFIVRGGRDLFKLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR 462 RA+ A+GA M S LDF+TSVF K+ +SLA +E+IVRGGR+LF LLP+AF GI QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK+GLR Sbjct: 49 RAVTAMVAAPPAVGAAMPS---------LDFDTSVFNKEKVSLAGHEEYIVRGGRNLFPLLPEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLR 144 The following BLAST results are available for this feature:
BLAST of FC876229 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876229 ID=FC876229; Name=FC876229; organism=Citrus clementina; type=EST; length=464bpback to top |