FC876255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876255 vs. ExPASy Swiss-Prot
Match: RPT3_ARATH (Root phototropism protein 3 OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 3.340e-51 Identity = 113/148 (76.35%), Postives = 120/148 (81.08%), Query Frame = 2 Query: 2 KDQRMIIESLISIIPPQKDSVSCSFLLRLLRMANMLKVAPALVTELEKRVGMQFEQATLADLLIPAY-SKRETLYDVDLVQRLLEHFLVQEQTESSSPSRQSFS-DKHMYDASQRGNGT----------SAKMRVARLVDGYLTEVAR 409 KDQRMI+ESLISIIPPQKDSV+CSFLLRLLR ANMLKVAPAL+TELEKRVGMQFEQATL DLLIP Y +K ET+YDVDLVQRLLEHFLVQEQTE SSPSR S S + MY RGN +AKMRVARLVD YLTEVAR Sbjct: 370 KDQRMIVESLISIIPPQKDSVTCSFLLRLLRAANMLKVAPALITELEKRVGMQFEQATLQDLLIPGYNNKGETMYDVDLVQRLLEHFLVQEQTEGSSPSRMSPSPSQSMYADIPRGNNNNGGGGGGNNQNAKMRVARLVDSYLTEVAR 517
BLAST of FC876255 vs. ExPASy Swiss-Prot
Match: NPH3_ORYSJ (Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica GN=CPT1 PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 5.910e-40 Identity = 94/156 (60.26%), Postives = 110/156 (70.51%), Query Frame = 2 Query: 2 KDQRMIIESLISIIPPQKDSVSCSFLLRLLRMANMLKVAPALVTELEKRVGMQFEQATLADLLIPAYSKR--ETLYDVDLVQRLLEHFLVQEQTE---SSSP---------------SRQSFSDKHMYDASQRGNGTSAKMRVARLVDGYLTEVAR 409 ++QRM++ES+ISI PPQ+DSVSC FLLRLLR+A ML+ APALVTELEKRVGMQ EQA LADLLIP+Y R +T YDVDLVQRL+EHFLVQEQTE +SSP R S AS G +AK RVARL+D YL+EV+R Sbjct: 365 REQRMVVESIISITPPQRDSVSCGFLLRLLRLAIMLRAAPALVTELEKRVGMQLEQAALADLLIPSYGGRAADTAYDVDLVQRLVEHFLVQEQTEMAVASSPGRGDPPPPPQPEYYSGRMPPSSAAAASASASTGGLNAKARVARLLDSYLSEVSR 520
BLAST of FC876255 vs. ExPASy Swiss-Prot
Match: Y1044_ARATH (BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana GN=At1g30440 PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 8.872e-20 Identity = 57/139 (41.01%), Postives = 86/139 (61.87%), Query Frame = 2 Query: 2 KDQRMIIESLISIIPPQKDSVSCSFLLRLLRMANMLKVAPALVTELEKRVGMQFEQATLADLLIPAYS-KRETLYDVDLVQRLLEHFLVQEQTES---SSPSRQSFSDKHMYDASQRGNGTSAKMRVARLVDGYLTEVA 406 ++Q+ ++E + ++ QK V F + +LR+A +LK +P + LEKR+GMQ +QA L DL++P++S ETLYDVD VQR+L+HFL +Q SP S D ++ + Q +A VA+L+DGYL EVA Sbjct: 286 EEQKNLLEEIQELLRMQKGLVPTKFFVDMLRIAKILKASPDCIANLEKRIGMQLDQAALEDLVMPSFSHTMETLYDVDSVQRILDHFLGTDQIMPGGVGSPC-SSVDDGNLIGSPQSITPMTA---VAKLIDGYLAEVA 420
BLAST of FC876255 vs. ExPASy Swiss-Prot
Match: Y5880_ARATH (BTB/POZ domain-containing protein At5g48800 OS=Arabidopsis thaliana GN=At5g48800 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.579e-15 Identity = 48/134 (35.82%), Postives = 79/134 (58.96%), Query Frame = 2 Query: 8 QRMIIESLISIIPPQKDSVSCSFLLRLLRMANMLKVAPALVTELEKRVGMQFEQATLADLLIPAYSKR-ETLYDVDLVQRLLEHFLVQEQTESSSPSRQSFSDKHMYDASQRGNGTSAKMRVARLVDGYLTEVA 406 ++ I+E++++++P + V SFL LLR A +L + + +LE+R+G Q + ATL DLLIP++ +TL+D+D V R+L +F Q+ + S F + SQ +A +VA+LVD YL E+A Sbjct: 269 EQTIVETIVTLLPVENLVVPISFLFGLLRRAVILDTSVSCRLDLERRLGSQLDMATLDDLLIPSFRHAGDTLFDIDTVHRILVNF-SQQGGDDSEDEESVFECDSPHSPSQ-----TAMFKVAKLVDSYLAEIA 396
BLAST of FC876255 vs. ExPASy Swiss-Prot
Match: RPT2_ARATH (Root phototropism protein 2 OS=Arabidopsis thaliana GN=RPT2 PE=1 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 4.413e-11 Identity = 43/134 (32.09%), Postives = 70/134 (52.24%), Query Frame = 2 Query: 8 QRMIIESLISIIPPQKDSVSCSFLLRLLRMANMLKVAPALVTELEKRVGMQFEQATLADLLIPAYS-KRETLYDVDLVQRLLEHFLVQEQTESSSPSRQSFSDKHMYDASQRGNGTSAKMRVARLVDGYLTEVA 406 QR +++S++S++P K +FL LLR A L + ELEKR+ + E ++ DLLIP+++ E L D+D V+R++ F+ +E+ RG + + RVA+ VD YL E+A Sbjct: 258 QRDLVQSIVSLLPSDKGLFPVNFLCSLLRCAVFLDTSLTCKNELEKRISVVLEHVSVDDLLIPSFTYDGERLLDLDSVRRIISAFVEKEKNVGVFNGGD----------FNRGVCSVSLQRVAKTVDSYLAEIA 381 The following BLAST results are available for this feature:
BLAST of FC876255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876255 ID=FC876255; Name=FC876255; organism=Citrus clementina; type=EST; length=409bpback to top |