FC876283

Overview
NameFC876283
Unique NameFC876283
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length592
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876283 vs. ExPASy Swiss-Prot
Match: CYT5_ARATH (Cysteine proteinase inhibitor 5 OS=Arabidopsis thaliana GN=CYS5 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 2.161e-24
Identity = 62/122 (50.82%), Postives = 83/122 (68.03%), Query Frame = 2
Query:  131 MNQRLCCLIVLFLSVV--PLLAAGDRKGAFVGGWMPIKDPKEKHVMEIGQFAVTEYNKRSKSALKFESVEEGETQVVSGTNYRLILVVKDGPS-TKKFEAVVFEKQWEHFKSLTSFKPMLGG 487
            M  ++  L++L L VV  PL A+     A VGGW PI +  +  V+EIG+FAV+EYNKRS+S LKFE+V  GETQVVSGTNYRL +   DG   +K + A+V++K W  F++LTSF+P   G
Sbjct:    1 MTSKVVFLLLLSLVVVLLPLYASA---AARVGGWSPISNVTDPQVVEIGEFAVSEYNKRSESGLKFETVVSGETQVVSGTNYRLKVAANDGDGVSKNYLAIVWDKPWMKFRNLTSFEPANNG 119          
BLAST of FC876283 vs. ExPASy Swiss-Prot
Match: CYT8_ORYSJ (Cysteine proteinase inhibitor 8 OS=Oryza sativa subsp. japonica GN=Os03g0429000 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.342e-17
Identity = 50/117 (42.74%), Postives = 68/117 (58.12%), Query Frame = 2
Query:  140 RLCCLIVLFLSVVPLLAA---GDR-KGAFVGGWMPIKDPKEKHVMEIGQFAVTEYNKRSKSALKFESVEEGETQVVSGTNYRLILVVKD-GPSTKKFEAVVFEKQWEHFKSLTSFKP 475
            R+  L+ L L+V    AA   G+R  G  VGGW PI D  + H+ E+G +AV  +   S   L+F  V  GE QVVSG NYRL++   D   +T  + AVV+E+ W + + LTSFKP
Sbjct:    3 RIPLLLALLLAVSAAAAAQVGGNRGHGPLVGGWSPITDVGDPHIQELGGWAVERHASLSSDGLRFRRVTSGEQQVVSGMNYRLVVSASDPAGATASYVAVVYEQSWTNTRQLTSFKP 119          
BLAST of FC876283 vs. ExPASy Swiss-Prot
Match: CYT4_ARATH (Cysteine proteinase inhibitor 4 OS=Arabidopsis thaliana GN=CYS4 PE=3 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 9.722e-17
Identity = 51/117 (43.59%), Postives = 69/117 (58.97%), Query Frame = 2
Query:  131 MNQRLCCLIVLFLSVVPLLAAGDRKGAFVGGWMPIKDPKEKHVMEIGQFAVTEYNKRSKSALKFESVEEGETQVVSGTNYRLILVVKD-GPSTKKFEAVVFEKQWEHFKSLTSFKPM 478
            M + L CL ++ L +V ++  G   G  +G   PIK+  +  V+ + ++A+ E+NK SK  L F  V EG TQVVSGT Y L +  KD G   K +EAVV EK W H KSL SFK +
Sbjct:    2 MMKSLICLSLILLPLVSVVE-GLGGGGGLGSRKPIKNVSDPDVVAVAKYAIEEHNKESKEKLVFVKVVEGTTQVVSGTKYDLKIAAKDGGGKIKNYEAVVVEKLWLHSKSLESFKAL 117          
BLAST of FC876283 vs. ExPASy Swiss-Prot
Match: CYT1_ORYSJ (Cysteine proteinase inhibitor 1 OS=Oryza sativa subsp. japonica GN=Os01g0803200 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 3.128e-15
Identity = 38/91 (41.76%), Postives = 60/91 (65.93%), Query Frame = 2
Query:  206 GAFVGGWMPIKDPKEKHVMEIGQFAVTEYNKRSKSALKFESVEEGETQVVSGTNYRLILVVKDGPSTKKFEAVVFEKQWEHFKSLTSFKPM 478
            G  +GG  P+ +  + H++++ +FAVTE+NK++ S L+FE +   + QVV+GT Y   + VK+G + K +EA V+EK W  FK L  FKP+
Sbjct:   44 GPVLGGVEPVGNENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPWMDFKELQEFKPV 134          
BLAST of FC876283 vs. ExPASy Swiss-Prot
Match: CYT1_MAIZE (Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.027e-14
Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 2
Query:  188 AAGDRKGAFVGGWMPIK-DPKEKHVMEIGQFAVTEYNKRSKSALKFESVEEGETQVVSGTNYRLILVVKDGPSTKKFEAVVFEKQWEHFKSLTSFKPMLGG 487
            +  D  G   GG   +  +  +  + E+ +FAV E+N+++ + L FE + + +TQVV+GT Y L + VKDG   K +EA V+EK WE+FK L  FKP+  G
Sbjct:   32 SVADNAGMLAGGIKDVPANENDLQLQELARFAVNEHNQKANALLGFEKLVKAKTQVVAGTMYYLTIEVKDGEVKKLYEAKVWEKPWENFKQLQEFKPVEEG 132          
BLAST of FC876283 vs. ExPASy Swiss-Prot
Match: CYTM_SOLTU (Multicystatin OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.458e-14
Identity = 45/147 (30.61%), Postives = 77/147 (52.38%), Query Frame = 2
Query:  164 FLSVVPLLAAGDRKGAFVGGWMPIKDPKEKHVMEIGQFAVTEYNKRSKSALKFESVEEGETQVVSGTNYRLILVVKDGPSTKKFEAVVFEKQWEHFKSLTSFK------PMLGGWTPID-PTEKHVMEIGQFAVTEYNKRSKSALKF 583
            F  VV     GD   A +GG + +  P      ++ +FAV +YNK+  + L+F      + Q+V+G  Y + LV  D    K +EA ++ K+WE+FK +  FK       ++GG+T +  P      ++ +FAV +YNK+  + L++
Sbjct:  460 FKKVVEFKLVGD-DSAKLGGIINVPFPNNPEFQDLARFAVQDYNKKENAHLEFVENLNVKEQLVAGMLYYITLVAIDAGKKKIYEAKIWVKEWENFKKVIEFKLIGDDSAIIGGFTDVPFPNNPEFQDLARFAVQDYNKKENAHLEY 605          

HSP 2 Score: 76.2554 bits (186), Expect = 1.314e-13
Identity = 46/148 (31.08%), Postives = 73/148 (49.32%), Query Frame = 2
Query:  164 FLSVVPLLAAGDRKGAFVGGWMPIKDPKEKHVMEIGQFAVTEYNKRSKSALKFESVEEGETQVVSGTNYRLILVVKDGPSTKKFEAVVFEKQWEHFKSLTSFK-------PMLGGWTPID-PTEKHVMEIGQFAVTEYNKRSKSALKF 583
            F  VV     GD   A  GG + + +P      ++ +FAV +YN    + L+F      + Q+VSG  Y + L   D  + K++EA ++ K+WE FK +  FK         LGG+T +  P      ++ +FAV +YNK   + L+F
Sbjct:  271 FKKVVEFKLVGD-DSAKTGGIINVPNPNSPEFQDLARFAVQDYNNTQNAHLEFVENLNVKEQLVSGMMYYITLAATDAGNKKEYEAKIWVKEWEDFKKVIDFKLVGNDSAKKLGGFTEVPFPNSPEFQDLTRFAVHQYNKDQNAHLEF 417          

HSP 3 Score: 72.7886 bits (177), Expect = 1.453e-12
Identity = 38/132 (28.79%), Postives = 72/132 (54.55%), Query Frame = 2
Query:  209 AFVGGWMPIKDPKEKHVMEIGQFAVTEYNKRSKSALKFESVEEGETQVVSGTNYRLILVVKDGPSTKKFEAVVFEKQWEHFKSLTSFK------PMLGGWTPI-DPTEKHVMEIGQFAVTEYNKRSKSALKF 583
            A VGG + +    +    ++ +FAV +YN+++ S+L+F+ V   + Q+V+G  Y +     +G + K++EA +  ++WE  K +  FK       M GG   + +P      E+ +FA+ +YNK+  + L+F
Sbjct:    2 AIVGGLVDVPFENKVEFDDLARFAVQDYNQKNDSSLEFKKVLNVKQQIVAGIMYYITFEATEGGNKKEYEAKILLRKWEDLKKVVGFKLVGDDSTMPGGIVNVPNPNNTKFQELARFAIQDYNKKQNAHLEF 133          

HSP 4 Score: 72.0182 bits (175), Expect = 2.478e-12
Identity = 42/147 (28.57%), Postives = 69/147 (46.94%), Query Frame = 2
Query:  164 FLSVVPLLAAGDRKGAFVGGWMPIKDPKEKHVMEIGQFAVTEYNKRSKSALKFESVEEGETQVVSGTNYRLILVVKDGPSTKKFEAVVFEKQWEHFKSLTSFK------PMLGGWTPID-PTEKHVMEIGQFAVTEYNKRSKSALKF 583
            F  V+     G+     +GG+  +  P      ++ +FAV +YNK   + L+F      + QVV+G  Y +     DG   K +E  ++ K WE+FK +  FK        LGG   +  P      ++ +FAV +YNK+  + L+F
Sbjct:  365 FKKVIDFKLVGNDSAKKLGGFTEVPFPNSPEFQDLTRFAVHQYNKDQNAHLEFVENLNVKKQVVAGMLYYITFAATDGGKKKIYETKIWVKVWENFKKVVEFKLVGDDSAKLGGIINVPFPNNPEFQDLARFAVQDYNKKENAHLEF 511          

HSP 5 Score: 71.633 bits (174), Expect = 3.237e-12
Identity = 42/147 (28.57%), Postives = 71/147 (48.30%), Query Frame = 2
Query:  164 FLSVVPLLAAGDRKGAFVGGWMPIKDPKEKHVMEIGQFAVTEYNKRSKSALKFESVEEGETQVVSGTNYRLILVVKDGPSTKKFEAVVFEKQWEHFKSLTSFK------PMLGGWTPID-PTEKHVMEIGQFAVTEYNKRSKSALKF 583
            F  V+     GD   A +GG+  +  P      ++ +FAV +YNK+  + L++      + Q+V+G  Y + LV  D    K +EA ++ K+WE FK +  FK         GG   +  P      ++ +FAV ++NK+    L+F
Sbjct:  554 FKKVIEFKLIGD-DSAIIGGFTDVPFPNNPEFQDLARFAVQDYNKKENAHLEYVENLNVKEQLVAGMIYYITLVATDAGKKKIYEAKIWVKEWEDFKKVVEFKLVGDDSAKPGGIIIVPFPNSPEFQDLARFAVQDFNKKENGHLEF 699          

HSP 6 Score: 70.4774 bits (171), Expect = 7.210e-12
Identity = 40/130 (30.77%), Postives = 66/130 (50.77%), Query Frame = 2
Query:  218 GGWMPIKDPKEKHVMEIGQFAVTEYNKRSKSALKFESVEEGETQVVSGTNYRLILVVKDGPSTKK-FEAVVFEKQWEHFKSLTSFK------PMLGGWTPID-PTEKHVMEIGQFAVTEYNKRSKSALKF 583
            GG + + +P      E+ +FA+ +YNK+  + L+F      + QVV+G  Y + L   D    KK ++A ++ K+WE FK +  FK        LGG T +  P      ++ +FA+  YNK+    L+F
Sbjct:   99 GGIVNVPNPNNTKFQELARFAIQDYNKKQNAHLEFVENLNVKEQVVAGIMYYITLAATDDAGKKKIYKAKIWVKEWEDFKKVVEFKLVGDDIAKLGGITDVPFPNNPEFQDLARFAIQVYNKKENVHLEF 228          
BLAST of FC876283 vs. ExPASy Swiss-Prot
Match: CYT6_ORYSJ (Cysteine proteinase inhibitor 6 OS=Oryza sativa subsp. japonica GN=Os03g0210200 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.927e-13
Identity = 44/99 (44.44%), Postives = 58/99 (58.59%), Query Frame = 2
Query:  182 LLAAGDRKGAFVGGWMPIKDPKEKHVMEIGQFAVTEYNKRSKS-ALKFESVEEGETQVVSGTNYRLILVVKDGPS--TKKFEAVVFEKQWEHFKSLTSF 469
            LLAA     A   GW PIK+  + H+ E+G++A+TE N+ S S  L F  V  GE QVVSG NYRL +    G    T  + AVVFE++W + + L SF
Sbjct:    9 LLAAVCAAAALPRGWSPIKNIDDPHIQELGRWAITENNRVSPSDELTFHRVTGGEQQVVSGMNYRLEIEAASGGGDVTGSYGAVVFEQEWSNTRKLISF 107          
BLAST of FC876283 vs. ExPASy Swiss-Prot
Match: CYT7_ORYSJ (Putative cysteine proteinase inhibitor 7 OS=Oryza sativa subsp. japonica GN=Os03g0210100 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.674e-11
Identity = 44/119 (36.97%), Postives = 68/119 (57.14%), Query Frame = 2
Query:  131 MNQRLCCLIVLFLSVVPLLAAGDRKGAFVGGWMPIKDPKEKHVMEIGQFAVTEYNKR-SKSALKFESVEEGETQVVSGTNYRLIL-VVKDGPSTKKFEAVVFEKQ-WEHFKSLTSFKPM 478
            M  R   L++  ++VV ++A      A VG W P+ D  + HV E+G++AV E ++  +   L FE V +GE QVV+G NYRL L     G    ++EAVV+E+    + + L SF+P+
Sbjct:    1 MTMRTSSLLLAAVAVVAIVAGAT--AATVGSWEPV-DINDPHVQELGRWAVAEEDRGVAAGGLTFERVTDGEKQVVAGVNYRLTLEASSSGAKDGRYEAVVYEQDPRSNARKLVSFEPI 116          
BLAST of FC876283 vs. ExPASy Swiss-Prot
Match: CYT1_HORVU (Cysteine proteinase inhibitor OS=Hordeum vulgare GN=ICY PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.104e-11
Identity = 34/93 (36.56%), Postives = 55/93 (59.14%), Query Frame = 2
Query:  203 KGAFVGGWM--PIKDPKEKHVMEIGQFAVTEYNKRSKSALKFESVEEGETQVVSGTNYRLILVVKDGPSTKKFEAVVFEKQWEHFKSLTSFKP 475
            +G  +GG    P     +   +E+ +FAV E+N ++ + L+FE + +   QVV+G  +   + VK+G + K +EA V+EK WE+FK L  FKP
Sbjct:   13 RGVLLGGVQDAPAGRENDLETIELARFAVAEHNAKANALLEFEKLVKVRQQVVAGCMHYFTIEVKEGGAKKLYEAKVWEKAWENFKQLQEFKP 105          
The following BLAST results are available for this feature:
BLAST of FC876283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
CYT5_ARATH2.161e-2450.82Cysteine proteinase inhibitor 5 OS=Arabidopsis tha... [more]
CYT8_ORYSJ3.342e-1742.74Cysteine proteinase inhibitor 8 OS=Oryza sativa su... [more]
CYT4_ARATH9.722e-1743.59Cysteine proteinase inhibitor 4 OS=Arabidopsis tha... [more]
CYT1_ORYSJ3.128e-1541.76Cysteine proteinase inhibitor 1 OS=Oryza sativa su... [more]
CYT1_MAIZE2.027e-1439.60Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1[more]
CYTM_SOLTU3.458e-1430.61Multicystatin OS=Solanum tuberosum PE=2 SV=1[more]
CYT6_ORYSJ2.927e-1344.44Cysteine proteinase inhibitor 6 OS=Oryza sativa su... [more]
CYT7_ORYSJ4.674e-1136.97Putative cysteine proteinase inhibitor 7 OS=Oryza ... [more]
CYT1_HORVU6.104e-1136.56Cysteine proteinase inhibitor OS=Hordeum vulgare G... [more]
back to top
Properties
Property NameValue
Genbank descriptionC32002H05EF DevOvary1 Citrus clementina cDNA clone C32002H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876283 ID=FC876283; Name=FC876283; organism=Citrus clementina; type=EST; length=592bp
GAAGAACTCGAAAAAGTAATTTAGTAAAACTCGCCGCCAATAAAATCCAA
AACTGAGGGCCAAGACGAAGTATTCACTCAAGGACCGCGAGTCACGCATT
GTGGTGTGAACGGTTACCAAAACAACGAAAATGAACCAACGTCTTTGCTG
TCTTATTGTTCTCTTTCTCTCCGTGGTCCCTCTCCTGGCCGCCGGCGACC
GTAAAGGAGCGTTTGTTGGGGGATGGATGCCGATAAAGGACCCCAAGGAG
AAGCACGTGATGGAGATCGGGCAGTTCGCGGTGACGGAGTACAACAAACG
GTCAAAGAGCGCGTTGAAGTTCGAGAGCGTGGAGGAGGGCGAGACTCAGG
TGGTTTCCGGCACCAATTACCGGCTGATCTTGGTCGTCAAGGACGGACCT
TCGACCAAGAAATTTGAAGCTGTCGTTTTCGAGAAGCAATGGGAGCATTT
CAAGAGTCTCACCTCGTTTAAGCCTATGCTTGGGGGATGGACTCCGATAG
ACCCCACGGAGAAGCACGTGATGGAGATCGGGCAGTTCGCGGTGACGGAG
TACAACAAACGGTCAAAGAGCGCGTTGAAGTTCGAGAACGTG
back to top