FC876340
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876340 vs. ExPASy Swiss-Prot
Match: SNAG_ARATH (Gamma-soluble NSF attachment protein OS=Arabidopsis thaliana GN=GSNAP PE=2 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 3.375e-65 Identity = 121/177 (68.36%), Postives = 141/177 (79.66%), Query Frame = 3 Query: 123 SSDPHKLMVKADKLTKLSLTRWSADWKSATQLYEQAANGFRVAKNIEQAKIAFEKASQGQEMLSSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPXXXXXXXXXXXXXXXVPEDAIQLYTDACIMLEEDDKEQMAFDVYRAATNVYIKLEKYADAATFLLRWGL 653 SSDP K+M KADK+TKL+LTRWSADW+ AT+LYEQAANGFR + E+AK+A EKAS+GQEM +SPWDAAKHMESAAALA++L W EVADFYRKASELY ECGR+QP P+DAIQLYTDAC +LEED ++QMAFD+YRA NVYIKLEK+ DAATF LR G+ Sbjct: 2 SSDPDKMMSKADKMTKLTLTRWSADWRGATELYEQAANGFRASNKYEKAKVALEKASKGQEMQASPWDAAKHMESAAALAQKLSIWNEVADFYRKASELYVECGRAQPASDALGKAARALEDVKPDDAIQLYTDACEILEEDGRDQMAFDLYRACANVYIKLEKFTDAATFFLRLGV 178
BLAST of FC876340 vs. ExPASy Swiss-Prot
Match: SNAG_DICDI (Gamma-soluble NSF attachment protein OS=Dictyostelium discoideum GN=snpC PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21 Identity = 58/166 (34.94%), Postives = 88/166 (53.01%), Query Frame = 3 Query: 144 MVKADKLTKLSLTRWSADWKSATQLYEQAANGFRVAKNIEQAKIAFEKASQGQEMLSSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPXXXXXXXXXXXXXXXVPEDAIQLYTDACIMLEEDDKEQMAFDVYRAATNVYIKLEKYADAATFLL 641 M + DKL+K ++ RW ADW SA YE+AAN FR AK + AK F + S Q + + AAK ME+A+A+AKEL +E A+ ++ +LY G S I+L TDAC + E DDK+ + D ++ ++ +K +KY +A ++ Sbjct: 17 MKEGDKLSKTNIFRWKADWDSAALAYEKAANAFRSAKIYDSAKYCFLRLSLCQTHMDVYYLAAKSMENASAMAKELKETQECANLLLESCKLYRTNGNSFQAADTMTKAAKLLEDIDLNQTIKLLTDACELFELDDKDHFSGDTFKQTISMLLKHKKYTEAVDLMI 182
BLAST of FC876340 vs. ExPASy Swiss-Prot
Match: SNAG_BOVIN (Gamma-soluble NSF attachment protein OS=Bos taurus GN=NAPG PE=1 SV=3) HSP 1 Score: 73.9442 bits (180), Expect = 8.723e-13 Identity = 48/173 (27.75%), Postives = 78/173 (45.09%), Query Frame = 3 Query: 111 AAMASSDPHKLMVKADKLTKLSLTRWSADWKSATQLYEQAANGFRVAKNIEQAKIAFEKASQGQEMLSSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPXXXXXXXXXXXXXXXVPEDAIQLYTDACIMLEEDDKEQMAFDVYRAATNVYIKLEKYADAA 629 AA ++ + + KA+K K +W D+ SA Y +AA F+ AK EQAK A K + E + + AAK E A + KE+ E KAS +Y E G PE A+QLY + E +++ + A ++ A+ + ++ ++ +AA Sbjct: 2 AAQKINEGLEHLAKAEKYLKTGFLKWKPDYDSAASEYGKAAVAFKNAKQFEQAKDACLKEAVAHENNRALFHAAKAYEQAGMMLKEMQKLPEAVQLIEKASMMYLENGTPDTAAMALERAGKLIENVDPEKAVQLYQQTANVFENEERLRQAVELLGKASRLLVRGRRFDEAA 174
BLAST of FC876340 vs. ExPASy Swiss-Prot
Match: SNAG_MOUSE (Gamma-soluble NSF attachment protein OS=Mus musculus GN=Napg PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.943e-12 Identity = 47/173 (27.17%), Postives = 78/173 (45.09%), Query Frame = 3 Query: 111 AAMASSDPHKLMVKADKLTKLSLTRWSADWKSATQLYEQAANGFRVAKNIEQAKIAFEKASQGQEMLSSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPXXXXXXXXXXXXXXXVPEDAIQLYTDACIMLEEDDKEQMAFDVYRAATNVYIKLEKYADAA 629 AA ++ + + KA+K K +W D+ SA Y +AA F+ AK EQAK A + + E + + AAK E A + KE+ E KAS +Y E G PE A+QLY + E +++ + A ++ A+ + ++ ++ +AA Sbjct: 2 AAQKINEGLEHLAKAEKYLKTGFLKWKPDYDSAASEYGKAAVAFKNAKQFEQAKDACLREAVAHENNRALFHAAKAYEQAGMMLKEMQKLPEAVQLIEKASMMYLENGTPDTAAMALERAGKLIENVDPEKAVQLYQQTANVFENEERLRQAVELLGKASRLLVRGRRFDEAA 174
BLAST of FC876340 vs. ExPASy Swiss-Prot
Match: SNAG_HUMAN (Gamma-soluble NSF attachment protein OS=Homo sapiens GN=NAPG PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.943e-12 Identity = 47/173 (27.17%), Postives = 78/173 (45.09%), Query Frame = 3 Query: 111 AAMASSDPHKLMVKADKLTKLSLTRWSADWKSATQLYEQAANGFRVAKNIEQAKIAFEKASQGQEMLSSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPXXXXXXXXXXXXXXXVPEDAIQLYTDACIMLEEDDKEQMAFDVYRAATNVYIKLEKYADAA 629 AA ++ + + KA+K K +W D+ SA Y +AA F+ AK EQAK A + + E + + AAK E A + KE+ E KAS +Y E G PE A+QLY + E +++ + A ++ A+ + ++ ++ +AA Sbjct: 2 AAQKINEGLEHLAKAEKYLKTGFLKWKPDYDSAASEYGKAAVAFKNAKQFEQAKDACLREAVAHENNRALFHAAKAYEQAGMMLKEMQKLPEAVQLIEKASMMYLENGTPDTAAMALERAGKLIENVDPEKAVQLYQQTANVFENEERLRQAVELLGKASRLLVRGRRFDEAA 174 The following BLAST results are available for this feature:
BLAST of FC876340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876340 ID=FC876340; Name=FC876340; organism=Citrus clementina; type=EST; length=690bpback to top |