FC876351

Overview
NameFC876351
Unique NameFC876351
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length404
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:1..406. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_MESCR (Adenosylhomocysteinase OS=Mesembryanthemum crystallinum GN=SAHH PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.978e-43
Identity = 84/92 (91.30%), Postives = 90/92 (97.83%), Query Frame = 1 
Query:  127 MALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            MAL+V+K++SGRE+KVKD+SQADFGRLEIELAEVEMPGLMACR EFGPSQPFKG KITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ
Sbjct:    1 MALAVEKTSSGREYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 92
[Close]
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_CATRO (Adenosylhomocysteinase OS=Catharanthus roseus GN=SAHH PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 3.375e-43
Identity = 84/92 (91.30%), Postives = 90/92 (97.83%), Query Frame = 1 
Query:  127 MALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            MAL V+K++SGRE+KVKD+SQADFGRLEIELAEVEMPGLM+CRAEFGPSQPFKG KITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ
Sbjct:    1 MALLVEKTSSGREYKVKDMSQADFGRLEIELAEVEMPGLMSCRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 92
[Close]
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_TOBAC (Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAHH PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 5.756e-43
Identity = 84/92 (91.30%), Postives = 88/92 (95.65%), Query Frame = 1 
Query:  127 MALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            MAL V+K+ SGRE+KVKD+SQADFGRLEIELAEVEMPGLMACR EFGPSQPFKG KITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ
Sbjct:    1 MALLVEKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 92
[Close]
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_NICSY (Adenosylhomocysteinase OS=Nicotiana sylvestris GN=SAHH PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 5.756e-43
Identity = 84/92 (91.30%), Postives = 88/92 (95.65%), Query Frame = 1 
Query:  127 MALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            MAL V+K+ SGRE+KVKD+SQADFGRLEIELAEVEMPGLMACR EFGPSQPFKG KITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ
Sbjct:    1 MALLVEKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 92
[Close]
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_PHASS (Adenosylhomocysteinase OS=Phalaenopsis sp. GN=SAHH PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 7.518e-43
Identity = 84/92 (91.30%), Postives = 89/92 (96.74%), Query Frame = 1 
Query:  127 MALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            MAL V+K+ SGRE+KVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKG +I+GSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ
Sbjct:    1 MALLVEKTTSGREYKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGARISGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 92
[Close]
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH1_ARATH (Adenosylhomocysteinase 1 OS=Arabidopsis thaliana GN=SAHH1 PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 1.675e-42
Identity = 82/92 (89.13%), Postives = 89/92 (96.74%), Query Frame = 1 
Query:  127 MALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            MAL V+K++SGRE+KVKD+SQADFGRLE+ELAEVEMPGLMACR EFGPSQPFKG +ITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ
Sbjct:    1 MALLVEKTSSGREYKVKDMSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 92
[Close]
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_LUPLU (Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 6.364e-42
Identity = 83/92 (90.22%), Postives = 88/92 (95.65%), Query Frame = 1 
Query:  127 MALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            MAL V+K+ SGRE+KVKD+SQADFGRLEIELAEVEMPGLMA R+EFGPSQPFKG KITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ
Sbjct:    1 MALLVEKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMASRSEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 92
[Close]
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_WHEAT (Adenosylhomocysteinase OS=Triticum aestivum GN=SAHH PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 8.312e-42
Identity = 81/92 (88.04%), Postives = 89/92 (96.74%), Query Frame = 1 
Query:  127 MALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            MALSV+K++SGRE+KVKDL QADFGRLE+ELAEVEMPGLMACR EFGPSQPFKG +I+GSLHMTIQTAVLIETLTALGAEVRWCSCNIFS+Q
Sbjct:    1 MALSVEKTSSGREYKVKDLFQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARISGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSSQ 92
[Close]
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_PETCR (Adenosylhomocysteinase OS=Petroselinum crispum GN=SAHH PE=2 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 1.418e-41
Identity = 80/92 (86.96%), Postives = 88/92 (95.65%), Query Frame = 1 
Query:  127 MALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            MALSV+K+A+GRE+KVKD+S ADFGRLE+ELAEVEMPGLM+CR EFGPSQPFKG +ITGSLHMTIQT VLIETLTALGAEVRWCSCNIFSTQ
Sbjct:    1 MALSVEKTAAGREYKVKDMSLADFGRLELELAEVEMPGLMSCRTEFGPSQPFKGARITGSLHMTIQTGVLIETLTALGAEVRWCSCNIFSTQ 92
[Close]
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_MEDSA (Adenosylhomocysteinase OS=Medicago sativa GN=SAHH PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.418e-41
Identity = 81/92 (88.04%), Postives = 87/92 (94.57%), Query Frame = 1 
Query:  127 MALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            MAL V+ + SGRE+KVKD+SQADFGRLEIELAEVEMPGLM+CR EFGPSQPFKG +ITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ
Sbjct:    1 MALLVETTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMSCRTEFGPSQPFKGARITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 92
The following BLAST results are available for this feature:
BLAST of FC876351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
SAHH_MESCR1.978e-4391.30Adenosylhomocysteinase OS=Mesembryanthemum crystal... [more]
SAHH_CATRO3.375e-4391.30Adenosylhomocysteinase OS=Catharanthus roseus GN=S... [more]
SAHH_TOBAC5.756e-4391.30Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAH... [more]
SAHH_NICSY5.756e-4391.30Adenosylhomocysteinase OS=Nicotiana sylvestris GN=... [more]
SAHH_PHASS7.518e-4391.30Adenosylhomocysteinase OS=Phalaenopsis sp. GN=SAHH... [more]
SAHH1_ARATH1.675e-4289.13Adenosylhomocysteinase 1 OS=Arabidopsis thaliana G... [more]
SAHH_LUPLU6.364e-4290.22Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH P... [more]
SAHH_WHEAT8.312e-4288.04Adenosylhomocysteinase OS=Triticum aestivum GN=SAH... [more]
SAHH_PETCR1.418e-4186.96Adenosylhomocysteinase OS=Petroselinum crispum GN=... [more]
SAHH_MEDSA1.418e-4188.04Adenosylhomocysteinase OS=Medicago sativa GN=SAHH ... [more]

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Properties
Property NameValue
Genbank descriptionC32003G05EF DevOvary1 Citrus clementina cDNA clone C32003G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876351 ID=FC876351; Name=FC876351; organism=Citrus clementina; type=EST; length=404bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGTCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGA
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