FC876362
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876362 vs. ExPASy Swiss-Prot
Match: COBL8_ARATH (COBRA-like protein 8 OS=Arabidopsis thaliana GN=COBL8 PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 6.106e-55 Identity = 104/186 (55.91%), Postives = 134/186 (72.04%), Query Frame = 3 Query: 78 WVSIFILFTTLPFTISQSXXXXXXXXXXXNTCNGVFLSYTYNSGSKLPPDNPKHHAYRFESTLTVLNNGLEQLKQWRAFVGFQHEEILVSASNAVLFDGNSFPASVGNGTVFAGFPMSDLKTAVMTAGDLTQMQVQVKIVGTQFGVGLRDVPMPKNISLANDGFLCSPVTRQGKSELHVCCTKECN 635 W+ + LFT + T SQ + CNGVF+SYTY +G+K+ P++ K+ YRFES +TVLNNG ++LK W+ FV F H EILVSA+NAVL DG+S PASV NGT+FAGFP +DLKTA+MTAGD+TQM+ +V++VGTQFGV VP+PKNI+L NDG+ C T+QG + L VCCT N Sbjct: 10 WILLSSLFTAIQLTSSQRNTPPPRSKDA-DLCNGVFVSYTYLTGTKIKPNDTKNQPYRFESEITVLNNGRDELKSWQVFVKFAHREILVSATNAVLSDGSSLPASVENGTIFAGFPSADLKTAIMTAGDVTQMEARVELVGTQFGVAPPSVPLPKNITLVNDGWSCPKPTQQGSNVLQVCCTPNPN 194
BLAST of FC876362 vs. ExPASy Swiss-Prot
Match: COBL7_ARATH (COBRA-like protein 7 OS=Arabidopsis thaliana GN=COBL7 PE=1 SV=2) HSP 1 Score: 204.527 bits (519), Expect = 3.705e-52 Identity = 100/180 (55.56%), Postives = 129/180 (71.67%), Query Frame = 3 Query: 93 ILFTTLPFTISQSXXXXXXXXXXX----NTCNGVFLSYTYNSGSKLPPDNPKHHAYRFESTLTVLNNGLEQLKQWRAFVGFQHEEILVSASNAVLFDGNSFPASVGNGTVFAGFPMSDLKTAVMTAGDLTQMQVQVKIVGTQFGVGLRDVPMPKNISLANDGFLCSPVTRQGKSELHVCC 620 +L ++P T SQS + CNGVF+SYT+ GSK+PP++ + YRFES +TVLN+G ++LK WR FV F H EILVSASNAVL DG+S P SV NGTVFAG+P SDLK+A+ TAGD+TQMQ +V++VGTQFGV +VP+PKNI+LA DG+ C T++G + L VCC Sbjct: 16 LLIVSIPLTSSQSDANTTNPSPSPPSDSDLCNGVFVSYTHTKGSKIPPNDTANQPYRFESVITVLNHGRDELKSWRVFVKFAHREILVSASNAVLSDGSSLPVSVENGTVFAGYPSSDLKSAIQTAGDVTQMQARVELVGTQFGVAPPNVPLPKNITLATDGWKCPKATQKGTNVLQVCC 195
BLAST of FC876362 vs. ExPASy Swiss-Prot
Match: COBL9_ARATH (COBRA-like protein 9 OS=Arabidopsis thaliana GN=COBL9 PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 3.834e-49 Identity = 94/189 (49.74%), Postives = 126/189 (66.67%), Query Frame = 3 Query: 87 IFILFTTLPFTISQSXXXXXXXXXXX------NTCNGVFLSYTYNSGSKLPPDNPKHHAYRFESTLTVLNNGLEQLKQWRAFVGFQHEEILVSASNAVLFDGNSFPASVGNGTVFAGFPMSDLKTAVMTAGDLTQMQVQVKIVGTQFGVGLRDVPMPKNISLANDGFLCSPVTRQGKSELHVCCTKECN 635 + +LFT P ++SQ + CNG+FLSY + G K+PP++ YRFES LTVLNNG E+LK+WR FVGFQH EIL+SA++A++ +G PA VGNGT+F G+P+SDLKTA+ TAGDL QM ++++VGTQF V VP+P NISL N+G+LC T Q K EL CC ++ + Sbjct: 11 VLLLFTVTPPSMSQLPPTIMVPAPAPAPISPSDLCNGIFLSYDFILGRKIPPNDTADQPYRFESVLTVLNNGREELKEWRVFVGFQHNEILISATDALIVNGTELPALVGNGTIFGGYPVSDLKTAIQTAGDLKQMTAEIELVGTQFMVAPPAVPLPSNISLVNEGWLCPVPTLQSKRELTTCCIRDAS 199
BLAST of FC876362 vs. ExPASy Swiss-Prot
Match: CBL10_ARATH (COBRA-like protein 10 OS=Arabidopsis thaliana GN=COBL10 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 6.570e-33 Identity = 68/154 (44.16%), Postives = 97/154 (62.99%), Query Frame = 3 Query: 171 CNGVFLSYTYNSGSKLPPD--NPKHHAYRFESTLTVLNNGLEQLKQWRAFVGFQHEEILVSASNAVLFDGNSFPASVGNGTVFAGFPMSDLKTAVMTAGDLTQMQVQVKIVGTQFGVGLRDVPMPKNISLANDGFLCSPVTRQGKSELHVCCTK 626 CNG+F+SY + S + P N ++ F+ST ++N G E+LK W+ F+GF+H+E++VSA+ A DG+ +P NGT F G P DLKT++ TAGD TQ+ ++I GT FGV PMP+ I L NDG+ C R+G S +HVCC + Sbjct: 58 CNGIFMSYNFGSREREYPHVKNVTAQSWAFKSTAMIVNAGREELKGWQMFIGFRHKELIVSATGATPMDGD-YPLDASNGTTFVGSPNMDLKTSIETAGDFTQISANIEITGTLFGVSKAVTPMPRTIKLTNDGWECPAAKRKGGS-MHVCCKR 209
BLAST of FC876362 vs. ExPASy Swiss-Prot
Match: CBL11_ARATH (COBRA-like protein 11 OS=Arabidopsis thaliana GN=COBL11 PE=2 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 4.258e-32 Identity = 70/154 (45.45%), Postives = 96/154 (62.34%), Query Frame = 3 Query: 171 CNGVFLSYTYNSGSKLPP--DNPKHHAYRFESTLTVLNNGLEQLKQWRAFVGFQHEEILVSASNAVLFDGNSFPASVGNGTVFAGFPMSDLKTAVMTAGDLTQMQVQVKIVGTQFGVGLRDVPMPKNISLANDGFLCSPVTRQGKSELHVCCTK 626 CNGV++SY+ KL P N A+ F+ST ++N G+E++K W+ FVGF H EI+VSA+ AV DG+ FP NGT F G +DLKT+++TAGD TQ+ ++I GT FG PMPK+I L NDG+ C T +G + VCC + Sbjct: 48 CNGVYMSYSSGGREKLYPRTTNATAQAWSFKSTAMIVNTGIEEVKGWQMFVGFHHREIIVSATGAVSSDGD-FPVDATNGTTFIGSQNTDLKTSILTAGDYTQISTNIEITGTVFGGKGTATPMPKSIKLTNDGWQCPAATSKG-GTMQVCCKR 199 The following BLAST results are available for this feature:
BLAST of FC876362 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876362 ID=FC876362; Name=FC876362; organism=Citrus clementina; type=EST; length=640bpback to top |