FC876377

Overview
NameFC876377
Unique NameFC876377
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10441 contig Ccv1_Contig10441:221..948. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PALY_POPTR (Phenylalanine ammonia-lyase OS=Populus trichocarpa GN=PAL PE=2 SV=1)

HSP 1 Score: 408.297 bits (1048), Expect = 2.144e-113
Identity = 209/247 (84.62%), Postives = 224/247 (90.69%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIA---TSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALCHGTAVGSGLAS 728
            D L+WGV AE +KGSHL+EVKRMVA+YRKPVV LGGETLT+AQVA+IA   T    VELSESAR GVKASSDWVM+SM+KGTDSYGVTTGFGATSHRRTK GGALQKELIRFLNAGIFGNGTE+ HTLPHSATRAAMLVR+NTLLQGYSGIRFEILEAIT+LLN+NITPCLPLRGTITASGDLVPLSYIAGLL GRPNSKATGP GE++DA EA K AG   GFFELQPKEGLAL +GTAVGSGLAS
Sbjct:   23 DPLSWGVAAEAMKGSHLDEVKRMVADYRKPVVKLGGETLTIAQVASIAGHDTGDVKVELSESARPGVKASSDWVMDSMDKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTETCHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITRLLNNNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPTGEVLDAAEAFKAAGIESGFFELQPKEGLALVNGTAVGSGLAS 269          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PALY_TRISU (Phenylalanine ammonia-lyase OS=Trifolium subterraneum GN=PAL1 PE=3 SV=1)

HSP 1 Score: 401.749 bits (1031), Expect = 2.007e-111
Identity = 207/245 (84.49%), Postives = 222/245 (90.61%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIAT-SSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFG--FFELQPKEGLALCHGTAVGSGLAS 728
            D LNWGV AE +KGSHL+EVKRMV EYRKPVV LGGETLT++QVAAIA      VELSESAR GVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK GGALQKELIRFLNAGIFGNGTES+HTLPH+ATRAAMLVR+NTLLQGYSGIRFEILEAITKLLN+NITPCLPLRGTITASGDLVPLSYIAGLL GR NSKA GP+GE+++A+EA + AG    FFELQPKEGLAL +GTAVGSGLAS
Sbjct:   35 DPLNWGVAAEAMKGSHLDEVKRMVEEYRKPVVRLGGETLTISQVAAIAAHDGATVELSESARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESNHTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNITPCLPLRGTITASGDLVPLSYIAGLLTGRSNSKAHGPSGEMLNAKEAFQLAGINAEFFELQPKEGLALVNGTAVGSGLAS 279          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PALY_HELAN (Phenylalanine ammonia-lyase OS=Helianthus annuus GN=PAL PE=2 SV=2)

HSP 1 Score: 401.749 bits (1031), Expect = 2.007e-111
Identity = 206/248 (83.06%), Postives = 221/248 (89.11%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATSS----TNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALCHGTAVGSGLAS 728
            D LNWGV AE L GSHL+EVK+MV E+RKPVV LGGETLTV+QVA I+ +       VELSE+AR GVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVR+NTLLQGYSGIRFEILEAITK LN+NITPCLPLRGTITASGDLVPLSYIAGLL GRPNSKA GP GE+++A+ A  QAG   GFFELQPKEGLAL +GTAVGSG+AS
Sbjct:   18 DPLNWGVAAEALTGSHLDEVKKMVGEFRKPVVKLGGETLTVSQVAGISAAGDGNMVKVELSEAARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFLNNNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPAGEVLNAESAFAQAGVEGGFFELQPKEGLALVNGTAVGSGMAS 265          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PAL3_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 400.208 bits (1027), Expect = 5.839e-111
Identity = 205/248 (82.66%), Postives = 222/248 (89.52%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATS----STNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALCHGTAVGSGLAS 728
            D LNW + A++LKGSHL+EVK+MVAE+RKPVV LGGETLTVAQVAAIA      +  VELSE AR GVKASSDWVM+SM+KGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAG+FGNGTES HTLP S TRAAMLVR+NTLLQGYSGIRFEILEAITKLLNHN+TPCLPLRGTITASGDLVPLSYIAGLL GRPNSKA GPNGE ++A+EA + AG   GFFELQPKEGLAL +GTAVGSGLAS
Sbjct:   19 DPLNWEMAADSLKGSHLDEVKKMVAEFRKPVVKLGGETLTVAQVAAIAAKDNAKTVKVELSEGARAGVKASSDWVMDSMSKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGVFGNGTESCHTLPQSGTRAAMLVRINTLLQGYSGIRFEILEAITKLLNHNVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAIGPNGETLNAEEAFRVAGVNSGFFELQPKEGLALVNGTAVGSGLAS 266          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PAL2_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum GN=PALA PE=2 SV=2)

HSP 1 Score: 400.208 bits (1027), Expect = 5.839e-111
Identity = 205/248 (82.66%), Postives = 221/248 (89.11%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATS----STNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALCHGTAVGSGLAS 728
            D LNW + A++LKGSHL+EVK+MVAE+RKPVV LGGETLTVAQVAAIA      +  VELSE AR GVKASSDWVM+SM KGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAG+FGNGTES HTLP S TRAAMLVR+NTLLQGYSGIRFEILEAITKLLNHN+TPCLPLRGTITASGDLVPLSYIAGLL GRPNSKA GPNGE ++A+EA + AG   GFFELQPKEGLAL +GTAVGSGLAS
Sbjct:   19 DPLNWEMAADSLKGSHLDEVKKMVAEFRKPVVKLGGETLTVAQVAAIAAKDNVKTVKVELSEGARAGVKASSDWVMDSMGKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGVFGNGTESCHTLPQSGTRAAMLVRINTLLQGYSGIRFEILEAITKLLNHNVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGETLNAEEAFRVAGVNGGFFELQPKEGLALVNGTAVGSGLAS 266          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PAL2_LITER (Phenylalanine ammonia-lyase 2 OS=Lithospermum erythrorhizon PE=2 SV=1)

HSP 1 Score: 399.823 bits (1026), Expect = 7.626e-111
Identity = 204/246 (82.93%), Postives = 222/246 (90.24%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIAT--SSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALCHGTAVGSGLAS 728
            D LNWG+ AE++KGSHL+EVK+MVAE+RKPVV L G+TLT+AQVAAIA       VEL+E+AREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK GGALQKELIRFLNAGIFGNGTE+SHTLPHSATRAAMLVR+NTLLQGYSGIRFEILEAITK LN NITPCLPLRGTITASGDLVPLSYIAGLL GRPNSKA GP GE ++A+EA + AG   GFFELQPKEGLAL +GTAVGSG+AS
Sbjct:   14 DPLNWGMAAESMKGSHLDEVKKMVAEFRKPVVQLAGKTLTIAQVAAIAARDDGVTVELAEAAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTETSHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFLNTNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPTGEKLNAEEAFRLAGISSGFFELQPKEGLALVNGTAVGSGMAS 259          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PAL1_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum GN=TPA1 PE=2 SV=1)

HSP 1 Score: 399.053 bits (1024), Expect = 1.301e-110
Identity = 203/249 (81.53%), Postives = 224/249 (89.96%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIAT-----SSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALCHGTAVGSGLAS 728
            D LNW + AE+L+GSHL+EVK+MV+E+RKP+V LGGE+LTVAQVAAIA      +   VELSE AR GVKASSDWVM+SMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAG+FGNGTE+SHTLPHSATRAAMLVR+NTLLQGYSGIRFEILEAITKL+N NITPCLPLRGTITASGDLVPLSYIAGLL GRPNSKA GPNGE ++A+EA + AG   GFFELQPKEGLAL +GTAVGSG+AS
Sbjct:   21 DPLNWEMAAESLRGSHLDEVKKMVSEFRKPMVKLGGESLTVAQVAAIAVRDKSANGVKVELSEEARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGVFGNGTETSHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLINSNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGETLNAEEAFRVAGVNGGFFELQPKEGLALVNGTAVGSGMAS 269          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PAL1_SOYBN (Phenylalanine ammonia-lyase 1 OS=Glycine max GN=PAL1 PE=3 SV=1)

HSP 1 Score: 397.897 bits (1021), Expect = 2.898e-110
Identity = 204/246 (82.93%), Postives = 220/246 (89.43%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIA--TSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFG--FFELQPKEGLALCHGTAVGSGLAS 728
            D LNWG  AE +KGSHL+EVKRMVAEYRKPVV LGGETLT+AQVAA+A       VELSESAREGVKASS+WVM SMN GTDSYGVTTGFGATSHRRTK GGALQKELIRFLNAGIFGNGTESSHTLPH+ATRAAMLVR+NTLLQGYSGIRFEILEAITKLLN+N+TPCL LRGTITASGDLVPLSYIAGLL GRPNSKA GP+GE+++A+EA + A     FFELQPKEGLAL +GTAVGSGLAS
Sbjct:   22 DPLNWGAAAEAMKGSHLDEVKRMVAEYRKPVVRLGGETLTIAQVAAVAGHDHGVAVELSESAREGVKASSEWVMNSMNNGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESSHTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNVTPCLDLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGEVLNAKEAFELASINSEFFELQPKEGLALVNGTAVGSGLAS 267          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PAL5_SOLLC (Phenylalanine ammonia-lyase OS=Solanum lycopersicum GN=PAL5 PE=3 SV=1)

HSP 1 Score: 397.127 bits (1019), Expect = 4.943e-110
Identity = 203/249 (81.53%), Postives = 223/249 (89.56%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIA-----TSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALCHGTAVGSGLAS 728
            D LNW + AE+L+GSHL+EVK+MV E+RKP+V LGGETLTVAQVA+IA     ++   VELSESAR GVKASSDWVM+SM KGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAG+FGNGTESSHTLPHSATRAAMLVR+NTLLQGYSGIRFEILEAITKL+N NITPCLPLRGTITASGDLVPLSYIAGLL GRPNSKA GPNGE ++A+E  + AG   GFFELQPKEGLAL +GTAVGSG+AS
Sbjct:   27 DPLNWEMAAESLRGSHLDEVKKMVDEFRKPIVKLGGETLTVAQVASIANVDNKSNGVKVELSESARAGVKASSDWVMDSMGKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGVFGNGTESSHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLINSNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGEKLNAEERFRVAGVTSGFFELQPKEGLALVNGTAVGSGMAS 275          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PAL1_DAUCA (Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=PAL1 PE=3 SV=1)

HSP 1 Score: 397.127 bits (1019), Expect = 4.943e-110
Identity = 204/244 (83.61%), Postives = 217/244 (88.93%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALCHGTAVGSGLAS 728
            D LNWG+ AE L GSHL+EVKRMVAE+RKP+V LGGETLTV+QVAAIA  S  VEL+ESAR GVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK GGALQKELIRFLNAGIFG+G +SS+ LPHSATRAAMLVR+NTLLQGYSGIRFEILEAITK LN NITPCLPLRGTITASGDLVPLSYIAGLL GRPNSKA GP GE + A EA K AG   GFFELQPKEGLAL +GTAVGSG+AS
Sbjct:   19 DPLNWGMAAEALTGSHLDEVKRMVAEFRKPMVQLGGETLTVSQVAAIAAGSVKVELAESARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGSGNDSSNILPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFLNQNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPTGENLTAAEAFKLAGVDGGFFELQPKEGLALVNGTAVGSGMAS 262          
The following BLAST results are available for this feature:
BLAST of FC876377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 250
Match NameE-valueIdentityDescription
PALY_POPTR2.144e-11384.62Phenylalanine ammonia-lyase OS=Populus trichocarpa... [more]
PALY_TRISU2.007e-11184.49Phenylalanine ammonia-lyase OS=Trifolium subterran... [more]
PALY_HELAN2.007e-11183.06Phenylalanine ammonia-lyase OS=Helianthus annuus G... [more]
PAL3_TOBAC5.839e-11182.66Phenylalanine ammonia-lyase OS=Nicotiana tabacum P... [more]
PAL2_TOBAC5.839e-11182.66Phenylalanine ammonia-lyase OS=Nicotiana tabacum G... [more]
PAL2_LITER7.626e-11182.93Phenylalanine ammonia-lyase 2 OS=Lithospermum eryt... [more]
PAL1_TOBAC1.301e-11081.53Phenylalanine ammonia-lyase OS=Nicotiana tabacum G... [more]
PAL1_SOYBN2.898e-11082.93Phenylalanine ammonia-lyase 1 OS=Glycine max GN=PA... [more]
PAL5_SOLLC4.943e-11081.53Phenylalanine ammonia-lyase OS=Solanum lycopersicu... [more]
PAL1_DAUCA4.943e-11083.61Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=... [more]

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Properties
Property NameValue
Genbank descriptionC32004A10EF DevOvary1 Citrus clementina cDNA clone C32004A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876377 ID=FC876377; Name=FC876377; organism=Citrus clementina; type=EST; length=728bp
GGGATGCGTTGAACTGGGGAGTGATGGCGGAGACGTTGAAGGGGAGCCAT
TTGGAGGAAGTGAAGCGTATGGTGGCGGAGTACAGGAAGCCGGTGGTCAA
CCTCGGTGGTGAGACGTTGACCGTAGCACAGGTGGCTGCCATTGCCACGT
CCTCTACGAATGTGGAGCTGTCGGAATCTGCCAGGGAAGGCGTCAAGGCC
AGCAGTGATTGGGTGATGGAGAGCATGAATAAGGGTACCGACAGTTACGG
CGTTACCACTGGCTTTGGTGCCACTTCTCATCGGAGAACCAAGAACGGCG
GTGCTCTTCAGAAGGAGCTCATTAGATTTTTGAACGCTGGAATCTTTGGA
AACGGAACAGAGTCATCTCACACGCTACCTCACTCAGCAACAAGGGCAGC
CATGCTTGTGAGGGTTAACACTCTTCTCCAGGGCTACTCCGGCATCCGAT
TTGAAATCCTGGAAGCGATCACAAAGCTGCTCAATCACAACATCACTCCA
TGCCTCCCTCTTCGCGGCACAATCACTGCTTCAGGGGATCTGGTTCCTCT
TTCCTACATTGCCGGACTGCTCGCCGGCCGGCCCAATTCTAAGGCCACCG
GGCCTAATGGAGAGATCATTGATGCCCAGGAAGCCTCTAAACAAGCGGGT
TTCGGGTTCTTTGAGTTGCAGCCTAAGGAGGGTCTTGCTCTTTGTCATGG
CACTGCTGTTGGTTCTGGCCTGGCTTCT
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