FC876384

Overview
NameFC876384
Unique NameFC876384
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9418 contig Ccv1_Contig9418:1..703. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876384 vs. ExPASy Swiss-Prot
Match: JMT_BRARP (Jasmonate O-methyltransferase OS=Brassica rapa subsp. pekinensis GN=JMT PE=1 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.265e-54
Identity = 116/237 (48.95%), Postives = 147/237 (62.03%), Query Frame = 3
Query:   54 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPT-KVAIADLGCSSGPNTLLVASELIQVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ------LGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVP-------DGLE-----SNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAERRMVLHF 707
            MEV+++LHMN G G TSYA NS+VQ  +IS+ + + +EA+ KL    S      IADLGCSSGPN+LL  S +++ +  +C  L   +PE  + LNDLP NDFN IF SL  F   ++K+      LG   G+ G CF + VPGSFYGRLFPR S+H  HSS SL WLSQVP       DG+       N+G I+++ TSP      Y  QFQ DFS+FL+ RSEELV   RMVL F
Sbjct:    1 MEVMRILHMNKGNGETSYAKNSIVQSNIISLGRRVMDEALKKLMIRNSEILSFGIADLGCSSGPNSLLSISNIVETIQNLCHDLDRPVPELSLSLNDLPSNDFNYIFASLPEFYDRVKKRDNNYESLGFEHGSGGPCFVSAVPGSFYGRLFPRRSLHFVHSSSSLHWLSQVPCGEVNKKDGVVITADLDNRGKIYLSKTSPKSAHKVYALQFQTDFSVFLRSRSEELVPGGRMVLSF 237          
BLAST of FC876384 vs. ExPASy Swiss-Prot
Match: JMT_ARATH (Jasmonate O-methyltransferase OS=Arabidopsis thaliana GN=JMT PE=1 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 5.878e-52
Identity = 115/234 (49.15%), Postives = 143/234 (61.11%), Query Frame = 3
Query:   54 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSP-TKVAIADLGCSSGPNTLLVASELIQVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKIL---RKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVP------------DGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAERRMVLHF 707
            MEV++VLHMN G G TSYA NS  Q  +IS+ + + +EA+ KL  S S  + + IADLGCSSGPN+LL  S ++  ++ +C  L   +PE +V LNDLP NDFN I  SL  F   +   ++ LG   G    CF + VPGSFYGRLFPR S+H  HSS SL WLSQVP              LE N G I+++ TSP     AY  QFQ DF +FL+ RSEELV   RMVL F
Sbjct:    1 MEVMRVLHMNKGNGETSYAKNSTAQSNIISLGRRVMDEALKKLMMSNSEISSIGIADLGCSSGPNSLLSISNIVDTIHNLCPDLDRPVPELRVSLNDLPSNDFNYICASLPEFYDRVNNNKEGLGFGRGGGESCFVSAVPGSFYGRLFPRRSLHFVHSSSSLHWLSQVPCREAEKEDRTITADLE-NMGKIYISKTSPKSAHKAYALQFQTDFLVFLRSRSEELVPGGRMVLSF 233          
BLAST of FC876384 vs. ExPASy Swiss-Prot
Match: BAMT_ANTMA (Benzoate carboxyl methyltransferase OS=Antirrhinum majus GN=BAMT PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 9.090e-45
Identity = 103/219 (47.03%), Postives = 140/219 (63.93%), Query Frame = 3
Query:   66 QVLHMN-GGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTS--PTKVAIADLGCSSGPNTLLVASELIQVVNKI-CDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLE-SNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAERRMVLHF 707
            ++L MN  G G TSYA+NS +Q+ ++S +  + +E +  +       P    + D+GCSSGPN LLV S +I  +  +  +K  ++LPEF+VFLNDLP NDFN +F+ L              S   G CF  G+PGSFYGRL P+ S+H  +SSYS+ WLSQVP+GLE +N+ NI+MA+ SPP V  AY +Q++RDFS FLK R EE+V   RMVL F
Sbjct:    6 KLLCMNIAGDGETSYANNSGLQKVMMSKSLHVLDETLKDIIGDHVGFPKCFKMMDMGCSSGPNALLVMSGIINTIEDLYTEKNINELPEFEVFLNDLPDNDFNNLFKLL--------------SHENGNCFVYGLPGSFYGRLLPKKSLHFAYSSYSIHWLSQVPEGLEDNNRQNIYMATESPPEVYKAYAKQYERDFSTFLKLRGEEIVPGGRMVLTF 210          
BLAST of FC876384 vs. ExPASy Swiss-Prot
Match: MT797_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g37970 OS=Arabidopsis thaliana GN=At5g37970 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.034e-28
Identity = 86/228 (37.72%), Postives = 116/228 (50.88%), Query Frame = 3
Query:   66 QVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTK------LFCSTSPTKVAIADLGCSSGPNTLLVASELIQVVNKICDK-----LGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKG-----NIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAERRMVL 701
            Q   MNGG G  SY  NS  Q+  I   K  T EA+ +      L  ++    + I D GCS GPNT  V   +I  V +   K     +G+ L EFQV  ND P NDFNT+FR+   F +              + F  GVPGSF+GR+ P+NS+H+ H+SY+L WLS VP  +   K      +    +     V  AY  QF++DF  FL+ R+EELV+   M+L
Sbjct:    6 QSFPMNGGDGPHSYIHNSSYQKVAIDGVKERTSEAILEKLDLEFLNRNSEENILRIVDFGCSIGPNTFDVVQNIIDTVKQKRLKENKTYIGAPL-EFQVCFNDQPNNDFNTLFRTQPFFSR-------------KEYFSVGVPGSFHGRVLPKNSLHIGHTSYTLHWLSNVPQHVCDKKSPALNKSYIQCNNLVDEVTKAYKIQFRKDFGGFLEARAEELVSGGLMIL 219          
BLAST of FC876384 vs. ExPASy Swiss-Prot
Match: MT799_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g37990 OS=Arabidopsis thaliana GN=At5g37990 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.722e-27
Identity = 89/228 (39.04%), Postives = 116/228 (50.88%), Query Frame = 3
Query:   66 QVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTK------LFCSTSPTKVAIADLGCSSGPNTLLVASELIQVVNKICDK-----LGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKG-----NIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAERRMVL 701
            Q   MNGG G  SY  NS  Q+  I  AK  T EA+ K      L  ++    + IAD GCS GPNT  V   +I  V +   K     +G+ L EFQV  ND P NDFNT+FR+    Q I  KQ   +          GVPGSF+GR+ P+NS+H+ H +Y+L WLS VP  +   K      +    +     V  AY  QF++D   FL  R+EELV+   M+L
Sbjct:    6 QSFPMNGGDGPHSYIHNSSYQKVAIDGAKEKTSEAILKNLDLELLNRNSDENILRIADFGCSIGPNTFEVVQNIIDTVKQKNLKENNAYIGAPL-EFQVCFNDQPNNDFNTLFRT----QPISSKQAYLS---------VGVPGSFHGRVLPKNSLHIGHITYALHWLSTVPQHVCDKKSPALNKSYIQCNNLVEEVTEAYRVQFKKDMGDFLGARAEELVSGGLMIL 219          
BLAST of FC876384 vs. ExPASy Swiss-Prot
Match: MT810_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g38100 OS=Arabidopsis thaliana GN=At5g38100 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.837e-27
Identity = 83/220 (37.73%), Postives = 109/220 (49.55%), Query Frame = 3
Query:   78 MNGGVGGTSYASNSLVQEKVISIAKPITEEAMTK---LFCSTSPTKVAIADLGCSSGPNTLLVASELIQVVN--KICDKLGSQLP--EFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKG-----NIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAERRMVL 701
            M+ G    SY  NS  Q+  IS A   T   + +   L  S+      IAD GCS GPNT  VA  +I  V   ++ +   + L   EFQVF ND P NDFNT+FR+                    + F  GVPGSFYGR+ PRNS+H+ H+SY+  WLS+VPD +   K      N    +     V  AY  QF +D  +FL  R+EELV    M++
Sbjct:   10 MSSGHDQHSYIHNSSYQKAAISSAVEKTRRCIFEKLDLQLSSDFGTFRIADFGCSIGPNTFHVAQSIIDTVKSKRLEESTENSLVPLEFQVFFNDQPTNDFNTLFRT-------------QPLSPEREYFSVGVPGSFYGRVLPRNSIHIGHTSYTTHWLSKVPDNVCDKKSMAWNKNYIQCNNLLEEVTKAYKVQFIKDMEIFLDARAEELVPGGLMIV 216          
BLAST of FC876384 vs. ExPASy Swiss-Prot
Match: MT878_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g38780 OS=Arabidopsis thaliana GN=At5g38780 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.234e-25
Identity = 82/222 (36.94%), Postives = 111/222 (50.00%), Query Frame = 3
Query:   78 MNGGVGGTSYASNSLVQEKVIS----IAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIQVVN----KICDKLGSQLP-EFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPD------GLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAERRMV 698
            M+GG    SY  NS  Q+  I      A+    E +  L  + + +   IAD GCS GPNT      +I +V     K   +     P EFQV+ NDLP NDFNT+FR+     K              + F  GVPGSFYGR+ PRNS+H+ ++S++  WLS+VP+       L  NK N    +     V  AY  QF++D  +FLK R+EELV    M+
Sbjct:   10 MSGGDDQHSYIHNSSYQKAGIDGVQEKARQYILENLDLLNMNPNLSTFTIADFGCSIGPNTFHAVQNIIDIVKLKHLKESQEDSRVAPLEFQVYFNDLPNNDFNTLFRTQPPSSK-------------QEYFSVGVPGSFYGRVLPRNSIHIGNTSFTTHWLSKVPEEVCDKNSLAWNK-NYIHCNNLIEEVTEAYKVQFEKDMGVFLKARAEELVPGGLMI 217          
The following BLAST results are available for this feature:
BLAST of FC876384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
JMT_BRARP1.265e-5448.95Jasmonate O-methyltransferase OS=Brassica rapa sub... [more]
JMT_ARATH5.878e-5249.15Jasmonate O-methyltransferase OS=Arabidopsis thali... [more]
BAMT_ANTMA9.090e-4547.03Benzoate carboxyl methyltransferase OS=Antirrhinum... [more]
MT797_ARATH2.034e-2837.72Probable S-adenosylmethionine-dependent methyltran... [more]
MT799_ARATH1.722e-2739.04Probable S-adenosylmethionine-dependent methyltran... [more]
MT810_ARATH3.837e-2737.73Probable S-adenosylmethionine-dependent methyltran... [more]
MT878_ARATH1.234e-2536.94Probable S-adenosylmethionine-dependent methyltran... [more]
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Properties
Property NameValue
Genbank descriptionC32004B06EF DevOvary1 Citrus clementina cDNA clone C32004B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876384 ID=FC876384; Name=FC876384; organism=Citrus clementina; type=EST; length=709bp
GAATAAAATAAGATCAAACGAGTGAGCGAGAAACAGAGAATACTGTGCGA
GAGATGGAGGTGGTCCAAGTGCTTCACATGAATGGAGGAGTAGGAGGCAC
AAGTTATGCCAGTAATTCACTGGTTCAGGAAAAAGTCATATCCATTGCAA
AGCCAATCACAGAGGAAGCCATGACCAAACTCTTCTGCAGCACGTCCCCA
ACAAAGGTAGCAATTGCCGACTTGGGCTGTTCTTCAGGACCAAACACTTT
GCTTGTGGCATCTGAACTTATCCAAGTAGTGAACAAGATCTGCGATAAGT
TGGGCAGTCAATTACCAGAATTTCAAGTGTTCCTGAACGATCTTCCAGGG
AATGACTTTAACACCATTTTCAGGTCTTTAGCAAGCTTCCAAAAGATACT
GAGAAAGCAATTAGGGTCGGCCTCTGGGGCAGCTGGGCAGTGCTTCTTCA
CTGGGGTCCCTGGTTCTTTCTATGGCAGGCTTTTCCCTCGCAATAGTGTG
CATCTTTTCCACTCTTCTTATAGTCTCCAATGGCTATCTCAAGTTCCAGA
TGGACTGGAGAGCAATAAAGGGAACATTTTCATGGCCAGTACAAGTCCGC
CATGCGTGCTTACGGCATATTACGAGCAATTTCAAAGAGATTTTTCATTG
TTTCTCAAGTGTCGTTCAGAGGAATTGGTGGCAGAAAGGCGCATGGTTTT
ACATTTCTA
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