FC876390
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876390 vs. ExPASy Swiss-Prot
Match: DCDA2_ARATH (Diaminopimelate decarboxylase 2, chloroplastic OS=Arabidopsis thaliana GN=LYSA2 PE=2 SV=1) HSP 1 Score: 405.216 bits (1040), Expect = 1.566e-112 Identity = 198/222 (89.19%), Postives = 209/222 (94.14%), Query Frame = 3 Query: 3 KKADGFLYCEDVRVQDVMETVEKRPFYLYSKPQITRNVEAYKQALEGLNSIIGYAIKANNNYKILEHLRKLGCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDKIR 668 K +DGFLYCE +VQD+METVEKRPFYLYSKPQITRN+EAYK+ALEG+ S+IGYAIKANNN KILEHLR LGCGAVLVSGNELRLAL AGFDPTKCIFNGNGK LEDLVLAAQEGVFVNVDSEFDL NIV ASRI+GK+VNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLD VKAHP ELKLVGAHCHLGSTITKVDIFRDAAVLM+ YID+IR Sbjct: 74 KSSDGFLYCEGTKVQDIMETVEKRPFYLYSKPQITRNLEAYKEALEGVRSVIGYAIKANNNLKILEHLRSLGCGAVLVSGNELRLALLAGFDPTKCIFNGNGKSLEDLVLAAQEGVFVNVDSEFDLNNIVEASRISGKQVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDEVKAHPKELKLVGAHCHLGSTITKVDIFRDAAVLMIEYIDEIR 295
BLAST of FC876390 vs. ExPASy Swiss-Prot
Match: DCDA1_ARATH (Diaminopimelate decarboxylase 1, chloroplastic OS=Arabidopsis thaliana GN=LYSA1 PE=1 SV=1) HSP 1 Score: 404.445 bits (1038), Expect = 2.672e-112 Identity = 196/222 (88.29%), Postives = 211/222 (95.05%), Query Frame = 3 Query: 3 KKADGFLYCEDVRVQDVMETVEKRPFYLYSKPQITRNVEAYKQALEGLNSIIGYAIKANNNYKILEHLRKLGCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDKIR 668 K +DGFLYCE +V+D+ME+VE+RPFYLYSKPQITRN+EAYK+ALEG++S+IGYAIKANNN KILEHLR LGCGAVLVSGNELRLALRAGFDPTKCIFNGNGK LEDLVLAAQEGVFVNVDSEFDL NIV ASRI+GK+VNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLD VKAHP ELKLVGAHCHLGSTITKVDIFRDAAVLM+ YID+IR Sbjct: 69 KSSDGFLYCEGTKVEDIMESVERRPFYLYSKPQITRNLEAYKEALEGVSSVIGYAIKANNNLKILEHLRSLGCGAVLVSGNELRLALRAGFDPTKCIFNGNGKSLEDLVLAAQEGVFVNVDSEFDLNNIVEASRISGKQVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDQVKAHPKELKLVGAHCHLGSTITKVDIFRDAAVLMIEYIDEIR 290
BLAST of FC876390 vs. ExPASy Swiss-Prot
Match: DCDA_ORYSJ (Probable diaminopimelate decarboxylase, chloroplastic OS=Oryza sativa subsp. japonica GN=LYSA PE=2 SV=1) HSP 1 Score: 367.851 bits (943), Expect = 2.772e-101 Identity = 175/221 (79.19%), Postives = 198/221 (89.59%), Query Frame = 3 Query: 9 ADGFLYCEDVRVQDVMETVEKRPFYLYSKPQITRNVEAYKQALEGLNSIIGYAIKANNNYKILEHLRKLGCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDKIRA 671 ADG LYCE VRV+D M E+ PFYLYSKPQ+ RN AY+ ALEGL SI+GYA+KANNN ++L+ LR+LGCGAVLVSGNELRLALRAGFDPT+CIFNGNGK LEDLVLAA+ GVFVN+DSEFDLENIV A+R+AGKKV VLLRINPDVDPQVHPYVATGNK SKFGIRNEKLQWFLD++K++ N++ LVG HCHLGSTITKVDIFRDAA LMVNY+D+IRA Sbjct: 76 ADGHLYCEGVRVEDAMGAAERTPFYLYSKPQVVRNFTAYRDALEGLRSIVGYAVKANNNLRVLQLLRELGCGAVLVSGNELRLALRAGFDPTRCIFNGNGKTLEDLVLAAESGVFVNIDSEFDLENIVTAARVAGKKVPVLLRINPDVDPQVHPYVATGNKTSKFGIRNEKLQWFLDSIKSYSNDITLVGVHCHLGSTITKVDIFRDAAGLMVNYVDEIRA 296
BLAST of FC876390 vs. ExPASy Swiss-Prot
Match: DCDA_PSEAE (Diaminopimelate decarboxylase OS=Pseudomonas aeruginosa GN=lysA PE=3 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 6.509e-34 Identity = 82/219 (37.44%), Postives = 127/219 (57.99%), Query Frame = 3 Query: 12 DGFLYCEDVRVQDVMETVEKRPFYLYSKPQITRNVEAYKQALEGLNSIIGYAIKANNNYKILEHLRKLGCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGVF-VNVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDKI 665 D L+ E V + + E P Y+YS+ I AY AL G+ ++ +A+KAN+N +L L +LG G +VS EL L AG DP K +F+G GK +D+ A + GV NV+S +LE + + G K V LR+NPDVD Q HPY++TG K +KFGI ++ + + A A + L+++G CH+GS +T+++ F DA ++ +D++ Sbjct: 8 DAELFAEGVALSRIAERFGT-PTYVYSRAHIEAQYRAYADALAGMPHLVCFAVKANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGDPAKVVFSGVGKTRDDMRRALEVGVHCFNVESGEELERLQRVAAELGVKAPVSLRVNPDVDAQTHPYISTGLKENKFGIAIDEAE-AVYARAAELDHLEVIGVDCHIGSQLTQLEPFLDALERLLGLVDRL 224
BLAST of FC876390 vs. ExPASy Swiss-Prot
Match: DCDA_AQUAE (Diaminopimelate decarboxylase OS=Aquifex aeolicus GN=lysA PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.399e-33 Identity = 80/219 (36.53%), Postives = 130/219 (59.36%), Query Frame = 3 Query: 12 DGFLYCEDVRVQDVMETVEKRPFYLYSKPQITRNVEAYKQALEGLNSIIGYAIKANNNYKILEHLRKLGCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGVFV-NVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDKI 665 DG L+ E V ++++ +T P Y+YS I EAY++A +++I YA+KAN N +++ L +LG GA +VSG EL LA +AG P + ++ G GK ++L A + + NV+S +L+ + + GKK + +R+NPDVDP+ HPY+ATG + SKFG+ + Q + N L++VG HCH+GS I + +R+A +V+ + + Sbjct: 15 DGELFIEGVSLKELAQTFGT-PLYVYSSNFIKERFEAYRKAFP--DALICYAVKANFNPHLVKLLGELGAGADIVSGGELYLAKKAGIPPERIVYAGVGKTEKELTDAVDSEILMFNVESRQELDVLNEIAGKLGKKARIAIRVNPDVDPKTHPYIATGMQKSKFGVDIREAQKEYEYASKLEN-LEIVGIHCHIGSQILDISPYREAVEKVVSLYESL 229
BLAST of FC876390 vs. ExPASy Swiss-Prot
Match: DCDA_NEIMB (Diaminopimelate decarboxylase OS=Neisseria meningitidis serogroup B GN=lysA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.039e-31 Identity = 84/224 (37.50%), Postives = 123/224 (54.91%), Query Frame = 3 Query: 21 LYCEDVRVQDVMETVEKRPFYLYSKPQITRNVEAYKQALEGLNSIIGYAIKANNNYKILEHLRKLGCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGV-FVNVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAH------PNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDKIRA 671 L+CE V + E P Y+YS+ +T E Y+ A LN ++ YA+KAN N I++H LG G +VSG EL L AG D K IF+G GK ++ A GV N++S +++ I + GK V LRINPDVD + HPY++TG K +KFGI + DA++A+ PN LK++G CH+GS +T + +A ++ +D + A Sbjct: 3 LFCEQVPYPRLAEAFGT-PLYVYSQSALTEAFEHYQTAFAALNPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAPVSLRINPDVDAKTHPYISTGLKANKFGIA------YADALEAYHYAAQQPN-LKIIGIDCHIGSQLTDLSPLVEACERILILVDALAA 218
BLAST of FC876390 vs. ExPASy Swiss-Prot
Match: DCDA_NEIMA (Diaminopimelate decarboxylase OS=Neisseria meningitidis serogroup A GN=lysA PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.949e-31 Identity = 82/224 (36.61%), Postives = 124/224 (55.36%), Query Frame = 3 Query: 21 LYCEDVRVQDVMETVEKRPFYLYSKPQITRNVEAYKQALEGLNSIIGYAIKANNNYKILEHLRKLGCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGV-FVNVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAH------PNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDKIRA 671 L+CE V + E P Y+YS+ +T E Y+ A L+ ++ YA+KAN N I++H LG G +VSG EL L AG D K IF+G GK ++ A GV N++S +++ I + GK +V LR+NPDVD + HPY++TG K +KFGI + DA++A+ PN LK++G CH+GS +T + +A ++ +D + A Sbjct: 3 LFCEQVPYPRLAEAFGT-PLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTASVSLRVNPDVDAKTHPYISTGLKANKFGIA------YADALEAYRHAAQQPN-LKIIGIDCHIGSQLTDLSPLVEACERILILVDALAA 218
BLAST of FC876390 vs. ExPASy Swiss-Prot
Match: DCDA_ARCFU (Diaminopimelate decarboxylase OS=Archaeoglobus fulgidus GN=lysA PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.949e-31 Identity = 81/210 (38.57%), Postives = 119/210 (56.67%), Query Frame = 3 Query: 9 ADGFLYCEDVRVQDVMETVEKRPFYLYSKPQITRNVEAYKQALEGLNSIIGYAIKANNNYKILEHLRKLGCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKL-----VGAHCHLGSTITKVDIF 623 +DG L E V+V +++ P Y+ S+ + RN+EAYK+A N + YA+KANNN ++ + G GA + S EL LA AGF +FNGN K +++ + GV +VDS +L I ++ GK+V + R+NPDVDP+ HP +ATG + SKFGI +E ++ +A+ LKL VG HCH+GS I + F Sbjct: 5 SDGILTVEGVKVTEIVRETGT-PVYVTSRALLERNLEAYKKAFS--NEGLLYAVKANNNLALMRIIASHGFGADVFSDGELYLASLAGFRKDMVLFNGNSKSRKEIEMGVTAGVKFSVDSLDELRTISKIAKEVGKEVEIAFRVNPDVDPKTHPKIATGLRESKFGIPHEMVR------EAYEMALKLDGVVPVGIHCHIGSQILDLSPF 205
BLAST of FC876390 vs. ExPASy Swiss-Prot
Match: DCDA_VIBCH (Diaminopimelate decarboxylase OS=Vibrio cholerae GN=lysA PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.447e-30 Identity = 79/221 (35.75%), Postives = 125/221 (56.56%), Query Frame = 3 Query: 12 DGFLYCEDVRVQDVMETVEKRPFYLYSKPQITRNVEAYKQALEGLNSIIGYAIKANNNYKILEHLRKLGCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGV-FVNVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDKIRA 671 DG L+ E V + D+ P Y+YS+ + R+ A+ +++ +I YA+KAN+N +L L +LG G +VS EL L AG DP+K +F+G GK ++ A Q + NV+SE +L+ + + G K + LRINPDVD + HPY++TG +++KFGI ++ + PN L + G CH+GS +T + F DA ++ ID ++A Sbjct: 9 DGQLWAEQVPLADLANQYGT-PLYVYSRATLERHWHAFDKSVGDYPHLICYAVKANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAQVYRLAHSLPN-LDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKA 227
BLAST of FC876390 vs. ExPASy Swiss-Prot
Match: DCDA_HELPJ (Diaminopimelate decarboxylase OS=Helicobacter pylori J99 GN=lysA PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.447e-30 Identity = 76/191 (39.79%), Postives = 115/191 (60.21%), Query Frame = 3 Query: 69 KRPFYLYSKPQITRNVEAYKQALEGLNSIIGYAIKANNNYKILEHLRKLGCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGV-FVNVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGI-RNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAA 635 K PFYLY +I + YK+A +G S+I YA+KAN+N IL L LG GA VS E++ AL+AG P K +F+G GK ++ A + + F+NV+S +L+ I ++ G K + +RINP++D + HPY++TG K +KFG+ E L+ FL A K+ L+ V H H+GS + +D +A+ Sbjct: 12 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLANLGSGADCVSIGEIQRALKAGIKPYKIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVEEKEALEMFLWAKKS--AFLEPVSVHFHIGSQLLDLDPITEAS 200 The following BLAST results are available for this feature:
BLAST of FC876390 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876390 ID=FC876390; Name=FC876390; organism=Citrus clementina; type=EST; length=671bpback to top |