FC876400

Overview
NameFC876400
Unique NameFC876400
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length648
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12834 contig Ccv1_Contig12834:432..1079. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876400 vs. ExPASy Swiss-Prot
Match: PEAM1_ARATH (Phosphoethanolamine N-methyltransferase 1 OS=Arabidopsis thaliana GN=NMT1 PE=2 SV=1)

HSP 1 Score: 377.096 bits (967), Expect = 4.295e-104
Identity = 177/214 (82.71%), Postives = 197/214 (92.06%), Query Frame = 3
Query:    6 GAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQIQDASGNSFELSLVGYKCIGAYVKNKKNQNQICWIWQKVRSQNDRGFQQFLDNVQYKLNGILRYERVFGVGFVSTGXN*DTKEF 647
            GAGIGRFTGELA+KAG +IALDFID+VIKKNE +NGH++NVKFMCADVTSPDL  ++ S+D++FSNWLLMYLSDKEVE LAERMV W+KVGGYIFFRESCFHQSGDSKRK NPTHYREPRFYSKVF+ECQ +DA+GNSFELS++G KCIGAYVKNKKNQNQICWIWQKV S+NDRGFQ+FLDNVQYK +GILRYERVFG GFVSTG    TKEF
Sbjct:   61 GAGIGRFTGELAQKAGELIALDFIDNVIKKNESINGHYKNVKFMCADVTSPDLKITDGSLDLIFSNWLLMYLSDKEVELLAERMVGWIKVGGYIFFRESCFHQSGDSKRKSNPTHYREPRFYSKVFQECQTRDAAGNSFELSMIGCKCIGAYVKNKKNQNQICWIWQKVSSENDRGFQRFLDNVQYKSSGILRYERVFGQGFVSTGGLETTKEF 274          
BLAST of FC876400 vs. ExPASy Swiss-Prot
Match: PEAM2_ARATH (Putative phosphoethanolamine N-methyltransferase 2 OS=Arabidopsis thaliana GN=NMT2 PE=2 SV=1)

HSP 1 Score: 364.385 bits (934), Expect = 2.881e-100
Identity = 170/214 (79.44%), Postives = 192/214 (89.72%), Query Frame = 3
Query:    6 GAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQIQDASGNSFELSLVGYKCIGAYVKNKKNQNQICWIWQKVRSQNDRGFQQFLDNVQYKLNGILRYERVFGVGFVSTGXN*DTKEF 647
            GAGIGRFTGELA+KAG VIALDFI+S I+KNE VNGH++N+KFMCADVTSPDL   + S+D++FSNWLLMYLSDKEVE +AERM+ W+K GGYIFFRESCFHQSGDSKRK NPTHYREPRFY+KVF+ECQ +DASGNSFELS+VG KCIGAYVKNKKNQNQICWIWQKV  +ND+ FQ+FLDNVQYK +GILRYERVFG G+VSTG    TKEF
Sbjct:   45 GAGIGRFTGELAQKAGEVIALDFIESAIQKNESVNGHYKNIKFMCADVTSPDLKIKDGSIDLIFSNWLLMYLSDKEVELMAERMIGWVKPGGYIFFRESCFHQSGDSKRKSNPTHYREPRFYTKVFQECQTRDASGNSFELSMVGCKCIGAYVKNKKNQNQICWIWQKVSVENDKDFQRFLDNVQYKSSGILRYERVFGEGYVSTGGFETTKEF 258          
BLAST of FC876400 vs. ExPASy Swiss-Prot
Match: PEAM3_ARATH (Putative phosphoethanolamine N-methyltransferase 3 OS=Arabidopsis thaliana GN=NMT3 PE=2 SV=2)

HSP 1 Score: 358.607 bits (919), Expect = 1.581e-98
Identity = 164/215 (76.28%), Postives = 193/215 (89.77%), Query Frame = 3
Query:    3 FGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQIQDASGNSFELSLVGYKCIGAYVKNKKNQNQICWIWQKVRSQNDRGFQQFLDNVQYKLNGILRYERVFGVGFVSTGXN*DTKEF 647
            FGAGIGRFT ELA+KAG VIA+DFI+SVIKKNE +NGH++NVKF+CADVTSP++ F  +S+D++FSNWLLMYLSD+EVE LA++M++W KVGGYIFFRESCFHQSGD+KRK+NPTHYREP+FY+K+FKEC + D  GNS+ELSLV  KCIGAYV+NKKNQNQICW+WQKV S NDRGFQ+FLDNVQYK +GILRYERVFG GFVSTG    TKEF
Sbjct:   59 FGAGIGRFTTELAQKAGQVIAVDFIESVIKKNENINGHYKNVKFLCADVTSPNMNFPNESMDLIFSNWLLMYLSDQEVEDLAKKMLQWTKVGGYIFFRESCFHQSGDNKRKYNPTHYREPKFYTKLFKECHMNDEDGNSYELSLVSCKCIGAYVRNKKNQNQICWLWQKVSSDNDRGFQRFLDNVQYKSSGILRYERVFGEGFVSTGGLETTKEF 273          
BLAST of FC876400 vs. ExPASy Swiss-Prot
Match: PEAMT_SPIOL (Phosphoethanolamine N-methyltransferase OS=Spinacia oleracea GN=PEAMT PE=1 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 1.338e-97
Identity = 166/214 (77.57%), Postives = 190/214 (88.79%), Query Frame = 3
Query:    6 GAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQIQDASGNSFELSLVGYKCIGAYVKNKKNQNQICWIWQKVRSQNDRGFQQFLDNVQYKLNGILRYERVFGVGFVSTGXN*DTKEF 647
            GAGIGRFTGELA+KA  VIALDFI+SVIKKNE +NGH++NVKFMCADVTSP L  S +SVD++FSNWLLMYLSD+EVE+L ERM+KWLK GGYIFFRESCFHQSGD KRK NPTHYREPRFY+K+FKEC +QD SGNS+ELSL+G KCIGAYVK+KKNQNQI W+WQKV S++D+GFQ+FLD+ QYK N ILRYERVFG G+VSTG    TKEF
Sbjct:   64 GAGIGRFTGELAEKASQVIALDFIESVIKKNESINGHYKNVKFMCADVTSPSLNISPNSVDIIFSNWLLMYLSDEEVERLVERMLKWLKPGGYIFFRESCFHQSGDHKRKSNPTHYREPRFYTKIFKECHMQDDSGNSYELSLIGCKCIGAYVKSKKNQNQISWLWQKVDSEDDKGFQRFLDSSQYKFNSILRYERVFGPGYVSTGGLETTKEF 277          
The following BLAST results are available for this feature:
BLAST of FC876400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
PEAM1_ARATH4.295e-10482.71Phosphoethanolamine N-methyltransferase 1 OS=Arabi... [more]
PEAM2_ARATH2.881e-10079.44Putative phosphoethanolamine N-methyltransferase 2... [more]
PEAM3_ARATH1.581e-9876.28Putative phosphoethanolamine N-methyltransferase 3... [more]
PEAMT_SPIOL1.338e-9777.57Phosphoethanolamine N-methyltransferase OS=Spinaci... [more]
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Properties
Property NameValue
Genbank descriptionC32004C11EF DevOvary1 Citrus clementina cDNA clone C32004C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876400 ID=FC876400; Name=FC876400; organism=Citrus clementina; type=EST; length=648bp
AATTTGGAGCTGGAATCGGTAGATTTACCGGTGAATTAGCTAAGAAGGCT
GGTCATGTTATAGCCCTGGACTTTATTGACAGTGTCATCAAGAAGAATGA
AGAAGTGAATGGGCATTTTGAGAATGTCAAATTCATGTGTGCAGATGTTA
CATCCCCAGACCTTACTTTCTCTGAGGATTCAGTGGACATGATGTTCTCA
AATTGGCTGCTGATGTATCTTTCAGACAAAGAGGTGGAAAAATTGGCAGA
AAGGATGGTTAAATGGTTAAAGGTCGGTGGGTACATCTTCTTCAGGGAGT
CATGTTTTCATCAATCTGGAGACAGCAAGCGAAAACACAACCCGACCCAC
TACCGTGAACCCAGATTTTATTCAAAGGTCTTTAAAGAATGCCAGATACA
AGATGCTTCAGGAAATTCCTTTGAGCTATCACTGGTTGGTTACAAGTGCA
TAGGAGCATATGTGAAAAACAAAAAGAACCAAAATCAGATTTGCTGGATC
TGGCAAAAGGTCCGTTCTCAAAATGATAGGGGGTTCCAACAGTTCCTGGA
TAATGTTCAGTATAAACTTAATGGCATTTTACGTTACGAGCGTGTCTTTG
GAGTAGGTTTTGTGAGCACAGGANGAAATTGAGACACAAAAGAATTTG
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