FC876416

Overview
NameFC876416
Unique NameFC876416
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length632
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10356 contig Ccv1_Contig10356:1..633. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: ASO_TOBAC (L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 4.862e-81
Identity = 136/171 (79.53%), Postives = 153/171 (89.47%), Query Frame = 3
Query:   96 ILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEAEVGLSS 608
            IL+  S   +   +KTRH+KW+VEY+ WSPD +ES+VMGINGQFPGPTIRA+AGDT+AV LTNKL+TEGVVIHWHGIRQ+GTPWADGTA+ISQC INPGET+LYRFKVDKAGTYFYHGH GMQRSAGLYGSLIV+V +GEKEPFHYDGEFNLLLSDWWH+  HE EV LSS
Sbjct:   15 ILLELSSSRSVMAAKTRHFKWDVEYIHWSPDGEESVVMGINGQFPGPTIRAKAGDTVAVHLTNKLHTEGVVIHWHGIRQIGTPWADGTAAISQCAINPGETFLYRFKVDKAGTYFYHGHYGMQRSAGLYGSLIVEVGEGEKEPFHYDGEFNLLLSDWWHKGSHEQEVDLSS 185          
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: ASO_CUCMA (L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2)

HSP 1 Score: 292.352 bits (747), Expect = 1.324e-78
Identity = 131/162 (80.86%), Postives = 143/162 (88.27%), Query Frame = 3
Query:  123 TSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEAEVGLSS 608
            +S GS+ RHYKWEVEYMFW+PDC E+IVMGINGQFPGPTIRA AGDT+ VEL NKL+TEGVVIHWHGI Q GTPWADGTASISQC INPGET+ Y F VD  GT+FYHGHLGMQRSAGLYGSLIVD   G+KEPFHYDGE NLLLSDWWH+S+H+ EVGLSS
Sbjct:   27 SSEGSQIRHYKWEVEYMFWAPDCNENIVMGINGQFPGPTIRANAGDTVVVELINKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSS 188          
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: ASO_CUCSA (L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 2.497e-77
Identity = 130/157 (82.80%), Postives = 140/157 (89.17%), Query Frame = 3
Query:  138 KTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEAEVGLSS 608
            K +HYKW+VEYMFWSPDC E+IVMGING+FPGPTIRA AGD + VELTNKL+TEGVVIHWHGI Q GTPWADGTASISQC INPGET+ YRF VDKAGTYFYHGHLGMQRSAGLYGSLIVD  +G  EPFHYD E NLLLSDWWH+SVH+ EVGLSS
Sbjct:   37 KIKHYKWDVEYMFWSPDCVENIVMGINGEFPGPTIRANAGDIVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFTYRFVVDKAGTYFYHGHLGMQRSAGLYGSLIVDPPEGRSEPFHYDEEINLLLSDWWHQSVHKQEVGLSS 193          
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: ASO_CUCPM (L-ascorbate oxidase OS=Cucurbita pepo var. melopepo PE=1 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 3.261e-77
Identity = 128/158 (81.01%), Postives = 141/158 (89.24%), Query Frame = 3
Query:  135 SKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEAEVGLSS 608
            S+ RHYKWEVEYMFW+P+C E+IVMGINGQFPGPTIRA AGD++ VELTNKL+TEGVVIHWHGI Q GTPWADGTASISQC INPGET+ Y F VD  GT+FYHGHLGMQRSAGLYGSLIVD   G+KEPFHYDGE NLLLSDWWH+S+H+ EVGLSS
Sbjct:    1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSS 158          
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: LAC1_ARATH (Laccase-1 OS=Arabidopsis thaliana GN=LAC1 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 9.621e-29
Identity = 63/176 (35.80%), Postives = 101/176 (57.39%), Query Frame = 3
Query:   78 VVVTCWILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPF---HYDGEFNLLLSDWWHRSVHEAE 593
            ++++ ++L+  ++   S  S TR + + VE+   +  C    ++ +NGQ+PGPT+    GD + +++TN++      IHWHG+RQ  T WADG A I+QCPI   ++Y YRFKV D+ GT  +H H   QR A +YG+ I  +   +  PF   H   E  ++L +WW+  V   E
Sbjct:    7 LIISTFLLLFTTLLPYSSASTTRRFHFNVEWKKVTRLCHTKQLLTVNGQYPGPTVAVHEGDIVEIKVTNRI-AHNTTIHWHGLRQYRTGWADGPAYITQCPIRSKQSYTYRFKVEDQRGTLLWHAHHSWQR-ASVYGAFI--IYPRQPYPFSGSHIQSEIPIILGEWWNDDVDNVE 178          
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: LAC25_ORYSJ (Laccase-25 OS=Oryza sativa subsp. japonica GN=LAC25 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.656e-28
Identity = 61/134 (45.52%), Postives = 85/134 (63.43%), Query Frame = 3
Query:  201 IVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVD-KAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKE-PF-HYDGEFNLLLSDWWHRSVHEAE 593
            I+  +NGQ PGPTI AR GDT+ V L N      + +HWHG+ Q GTPWADG A ++QCP+ PG  Y YRF VD + GT ++H H+   R A +YG+L++    G K  PF   D E  ++L +WW+ +V++ E
Sbjct:   45 IITAVNGQLPGPTIYAREGDTVVVHLVNTS-PYSMTLHWHGVLQRGTPWADGPAMVTQCPVQPGGNYTYRFNVDGQEGTLWWHAHVSFHR-ATVYGALVIRPRGGAKAYPFPKPDKEHVVILGEWWNATVYDME 176          
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: LAC23_ORYSJ (Laccase-23 OS=Oryza sativa subsp. japonica GN=LAC23 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.236e-28
Identity = 62/168 (36.90%), Postives = 98/168 (58.33%), Query Frame = 3
Query:   87 TCWIL---MLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNL---LLSDWW 569
            +CW+L   +LCS+      +K +++++ +        CK   +M +NGQFPGPT+  + GD++ + L N+     V +HWHG+RQ+ T W+DG   ++QCP+ PG++Y YRF V  + GT ++H H    R A +YG+L++   DG   PFH      L   LL +WW
Sbjct:    7 SCWLLSLALLCSLA----AAKEQYHEFVIRETTVKRLCKSQSIMTVNGQFPGPTLEIKEGDSLIINLINR-GRYNVTLHWHGVRQMRTGWSDGPEYVTQCPVRPGQSYRYRFTVAAQEGTLWWHAHSSWLR-ATVYGALLIRPRDGTSYPFHVQPTRELAPILLGEWW 168          
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: LAC7_ORYSJ (Laccase-7 OS=Oryza sativa subsp. japonica GN=LAC7 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.144e-28
Identity = 69/176 (39.20%), Postives = 98/176 (55.68%), Query Frame = 3
Query:   93 WILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHY-DGEFNLLLSDWWHRSVHEAEV-GLSSG 611
            W L    +  +   + T +Y + VE M  S  C  + ++ +NG  PGP I    GD +AVE+ N      + IHWHGI QL TPWADG + ++QCPI P  +Y YRF V  + GT ++H H    R A +YG+LI+   +G   PF   D E  ++L +WW R+V + E   +SSG
Sbjct:   14 WFLFALLLARSVADAATANYTFTVESMRVSRLCNSTDIIAVNGLLPGPMIEVNEGDAVAVEVINGS-PYNLTIHWHGILQLLTPWADGPSMVTQCPIQPNSSYTYRFNVTGQEGTLWWHAHSSFLR-ATVYGALIIRPRNGSAYPFPAPDQEVPIVLGEWWSRNVVDIESDAVSSG 187          
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: LAC3_ORYSJ (Laccase-3 OS=Oryza sativa subsp. japonica GN=LAC3 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.389e-27
Identity = 63/159 (39.62%), Postives = 91/159 (57.23%), Query Frame = 3
Query:   99 LMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVD-KAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDG-EFNLLLSDWW 569
            L+ CSV     G++  H+++ V+       CK   V+ +NGQ PGPT+  R GDT+ + + N      V IHWHGIRQ  T WADG   ++QCPI PG +Y YRF ++ + GT ++H H    R A +YG+LI+   + +  PF     E  L+L +WW
Sbjct:   12 LLSCSVLALLAGAEVHHHEFIVQETPVKRLCKTHNVITVNGQLPGPTLEVREGDTVVINVVNHAQYN-VTIHWHGIRQFRTGWADGPEFVTQCPIKPGGSYKYRFTIEGQEGTLWWHAHSSWLR-ATVYGALIIRPRENKTYPFEKPAREVPLILGEWW 168          
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: LAC16_ARATH (Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 3.095e-27
Identity = 73/181 (40.33%), Postives = 105/181 (58.01%), Query Frame = 3
Query:   51 MGLGLRHVAVVVTCWILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYD-GEFNLLLSDWWHRSVHE 587
            M +  R    V+T ++ +L S   T+  S  RHYK+ V     +  C    ++ +NGQFPGPTI AR GDTI +++ N +    V IHWHGIRQL T WADG A I+QCPI PG+ YL+ F +  + GT ++H H+   R A ++G++++    G   PF     E  ++LS+WW   V E
Sbjct:    1 MEIPRRFCICVLTFFVFVLLS--PTTVHSIIRHYKFNV-MTNTTKLCSSKPIVTVNGQFPGPTIVAREGDTILIKVVNHV-KYNVSIHWHGIRQLRTGWADGPAYITQCPIQPGQNYLHNFTLTGQRGTLWWHAHILWLR-ATVHGAIVILPKLGVPYPFPKPYKEKTIVLSEWWKSDVEE 176          
The following BLAST results are available for this feature:
BLAST of FC876416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
ASO_TOBAC4.862e-8179.53L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE... [more]
ASO_CUCMA1.324e-7880.86L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=... [more]
ASO_CUCSA2.497e-7782.80L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1[more]
ASO_CUCPM3.261e-7781.01L-ascorbate oxidase OS=Cucurbita pepo var. melopep... [more]
LAC1_ARATH9.621e-2935.80Laccase-1 OS=Arabidopsis thaliana GN=LAC1 PE=2 SV=... [more]
LAC25_ORYSJ3.656e-2845.52Laccase-25 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC23_ORYSJ6.236e-2836.90Laccase-23 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC7_ORYSJ8.144e-2839.20Laccase-7 OS=Oryza sativa subsp. japonica GN=LAC7 ... [more]
LAC3_ORYSJ1.389e-2739.62Laccase-3 OS=Oryza sativa subsp. japonica GN=LAC3 ... [more]
LAC16_ARATH3.095e-2740.33Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionC32004E07EF DevOvary1 Citrus clementina cDNA clone C32004E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876416 ID=FC876416; Name=FC876416; organism=Citrus clementina; type=EST; length=632bp
GGATCTTTCACCTTCTTTCTTACTCTTCATTAATAGTTGGATAGAAAAAA
ATGGGGTTAGGTTTGAGACATGTTGCTGTTGTTGTCACTTGTTGGATACT
AATGTTGTGTTCAGTTTTTGAGACCTCGTACGGTTCAAAAACCAGACACT
ATAAGTGGGAAGTAGAGTACATGTTTTGGTCCCCGGATTGCAAAGAAAGC
ATAGTGATGGGGATCAACGGTCAGTTTCCGGGGCCGACGATCCGAGCCAG
GGCCGGCGACACGATCGCCGTCGAGCTCACTAACAAGCTCTATACTGAAG
GAGTTGTGATTCATTGGCACGGAATCAGACAGCTCGGCACTCCATGGGCT
GATGGCACTGCTTCCATCTCCCAGTGTCCTATTAACCCCGGAGAAACCTA
TCTTTACAGATTCAAAGTTGACAAGGCAGGAACGTACTTTTACCATGGAC
ACTTAGGGATGCAAAGATCAGCAGGTCTGTACGGATCTCTGATTGTGGAC
GTGGCAGACGGAGAGAAAGAGCCATTCCATTATGATGGGGAGTTCAACTT
GTTGTTAAGTGATTGGTGGCACAGAAGTGTCCATGAAGCAGAGGTCGGCC
TCTCCTCAGGCCATTACGTTGGATTGGTGAGC
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