FC876425
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876425 vs. ExPASy Swiss-Prot
Match: HDDC2_HUMAN (HD domain-containing protein 2 OS=Homo sapiens GN=HDDC2 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.842e-33 Identity = 69/132 (52.27%), Postives = 95/132 (71.97%), Query Frame = 1 Query: 265 VIDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLLGEGARAKEIDELWMEYEENSTAEAKIVKDFDKAE 660 ++ FL L +LK R GWV RNV PES++DHMYRM +M +++ D +++D+C+++A+VHD+AE IVGDI P+D IPKEEK +RE EA+ + +LL E R KE+ ELW EYE S+AEAK VK D+ E Sbjct: 17 LLQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKD-DRLNKDRCVRLALVHDMAECIVGDIAPADNIPKEEKHRREEEAMKQITQLLPEDLR-KELYELWEEYETQSSAEAKFVKQLDQCE 146
BLAST of FC876425 vs. ExPASy Swiss-Prot
Match: HDDC2_BOVIN (HD domain-containing protein 2 OS=Bos taurus GN=HDDC2 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.194e-32 Identity = 67/132 (50.76%), Postives = 94/132 (71.21%), Query Frame = 1 Query: 265 VIDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLLGEGARAKEIDELWMEYEENSTAEAKIVKDFDKAE 660 ++ FL L +LK R GWV RNV PES++DHMYRM +M L+ D +++D+C+++A+VHD+AE IVGDI P+D +P+EEK +RE EA+ + +LL E + KE+ ELW EYE S+AEAK VK D+ E Sbjct: 18 LLQFLRLVGQLKRVPRTGWVYRNVQKPESVSDHMYRMAVMALVTKD-EHLNKDRCVRLALVHDMAECIVGDIAPADNVPREEKHRREEEAMKQLTQLLPEDLQ-KELYELWEEYETQSSAEAKFVKQLDQCE 147
BLAST of FC876425 vs. ExPASy Swiss-Prot
Match: HDDC2_MOUSE (HD domain-containing protein 2 OS=Mus musculus GN=Hddc2 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.560e-32 Identity = 69/132 (52.27%), Postives = 93/132 (70.45%), Query Frame = 1 Query: 265 VIDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLLGEGARAKEIDELWMEYEENSTAEAKIVKDFDKAE 660 ++ FL L +LK R GWV RNV PES++DHMYRM +M ++ D +++D+CI++A+VHD+AE IVGDI P+D IPKEEK +RE EA+ + +LL E R KE+ ELW EYE S+ EAK VK D+ E Sbjct: 12 LLRFLRLVGQLKRVPRTGWVYRNVEKPESVSDHMYRMAVMAMVTRD-DRLNKDRCIRLALVHDMAECIVGDIAPADNIPKEEKHRREEEAMKQITQLLPEDLR-KELYELWEEYETQSSEEAKFVKQLDQCE 141
BLAST of FC876425 vs. ExPASy Swiss-Prot
Match: HDDC2_DANRE (HD domain-containing protein 2 OS=Danio rerio GN=hddc2 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.926e-32 Identity = 64/132 (48.48%), Postives = 94/132 (71.21%), Query Frame = 1 Query: 265 VIDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLLGEGARAKEIDELWMEYEENSTAEAKIVKDFDKAE 660 ++ F+ L +LK R GWV RN+ PES++DHMYRM +M L + DI +++++C+K+A+VHD+AE IVGDI P+D + K EK +RE++A+ ++ LL +G R KEI LW EYE S+ EAK+VK+ D E Sbjct: 4 MLQFMKLVGQLKRVPRTGWVYRNIKQPESVSDHMYRMSMMALTIQDI-SVNKERCMKLALVHDLAECIVGDIAPADNVSKAEKHRREKDAMVHITGLLDDGLR-KEIYNLWEEYETQSSPEAKLVKELDNLE 133
BLAST of FC876425 vs. ExPASy Swiss-Prot
Match: YC0H_SCHPO (HD domain-containing protein C4G3.17 OS=Schizosaccharomyces pombe GN=SPCC4G3.17 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.011e-31 Identity = 69/135 (51.11%), Postives = 93/135 (68.89%), Query Frame = 1 Query: 265 VIDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREA---ITYMCKLLGEGARAKEIDELWMEYEENSTAEAKIVKDFDKAE 660 ++ FL RLKTT R GW+ + PESIADHMYRMG++ ++ D P I++++C+K+A+VHD+AE+IVGDITP + + KEEK + E EA IT L +A+EI EL++EYE ST EAK VKD DK E Sbjct: 9 IVPFLDCLSRLKTTPRTGWLYHGIEKPESIADHMYRMGILTMLCND-PSINKERCLKIAVVHDMAESIVGDITPHENVSKEEKHRMESEAMVSITQQLIPLNLSLQAEEIKELFLEYESASTPEAKFVKDIDKFE 142
BLAST of FC876425 vs. ExPASy Swiss-Prot
Match: HDDC2_DICDI (HD domain-containing protein 2 homolog OS=Dictyostelium discoideum GN=hddc2 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.906e-30 Identity = 71/138 (51.45%), Postives = 88/138 (63.77%), Query Frame = 1 Query: 268 IDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMG-------LIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLLGEGARAKEIDELWMEYEENSTAEAKIVKDFDKAE 660 ++F +C +LKT KR GWV V PES++DHMYRM +MG LI D ID+ K IKMA+VHD+ E++VGD TP D I KEEK Q E+ AI + L G KEI +LW EYE+ T EA +VKDFDK E Sbjct: 5 LEFFKICGKLKTLKRTGWVNHGVELPESVSDHMYRMAMMGMCLDKKELIGEDGKEIDKMKIIKMALVHDLGESLVGDFTPHDKITKEEKYQLEKNAIIEITNTL-SGEVGKEIFDLWQEYEDCKTNEALLVKDFDKFE 141
BLAST of FC876425 vs. ExPASy Swiss-Prot
Match: HDDC2_XENLA (HD domain-containing protein 2 OS=Xenopus laevis GN=hddc2 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.236e-29 Identity = 60/132 (45.45%), Postives = 92/132 (69.70%), Query Frame = 1 Query: 265 VIDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLLGEGARAKEIDELWMEYEENSTAEAKIVKDFDKAE 660 ++ F+ L +LK R GW+ R V PES++DHMYRM +M ++ D +++D+CI++A+VHD+AE IVGDI P+D I KEEK ++E+ A+ ++ +LL + + E+ +LW EYE TAEAK VK+ D+ E Sbjct: 14 LLQFMKLVGQLKRVPRTGWIYRQVEKPESVSDHMYRMAVMAMLTEDRK-LNKDRCIRLALVHDMAECIVGDIAPADNIAKEEKHRKEKAAMEHLTQLLPDNLKT-EVYDLWEEYEHQFTAEAKFVKELDQCE 143
BLAST of FC876425 vs. ExPASy Swiss-Prot
Match: YGK1_YEAST (HD domain-containing protein YGL101W OS=Saccharomyces cerevisiae GN=YGL101W PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.044e-28 Identity = 62/133 (46.62%), Postives = 92/133 (69.17%), Query Frame = 1 Query: 274 FLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLL----GEGARAKEIDELWMEYEENSTAEAKIVKDFDKAE 660 FL++ LKT +R GWV ++ ESI+DHMYRMGL +++ D +DR+KCI++A+VHD AE++VGDITP+D + KEEK +RE E + Y+C+ + E A ++EI + W+ YE+ + E + VKD DK E Sbjct: 32 FLNIIQLLKTQRRTGWVDHGIDPCESISDHMYRMGLTTMLITD-KNVDRNKCIRIALVHDFAESLVGDITPNDPMTKEEKHRREFETVKYLCESIIRPCSESA-SREILDDWLAYEKQTCLEGRYVKDIDKYE 162
BLAST of FC876425 vs. ExPASy Swiss-Prot
Match: YB92_YEAST (HD domain-containing protein YBR242W OS=Saccharomyces cerevisiae GN=YBR242W PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.670e-26 Identity = 60/135 (44.44%), Postives = 91/135 (67.41%), Query Frame = 1 Query: 265 VIDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLL---GEGARAKEIDELWMEYEENSTAEAKIVKDFDKAE 660 ++ FL++ +LK +R G++ + ESI+DHMYR+ ++ +++ D ++RDKC+++A+VHDIAE++VGDITP D I KEEK +RE E I Y+C L AKEI + W+ YE ++ EA+ VKD DK E Sbjct: 48 ILAFLNVVQQLKIQRRTGYLDLGIKECESISDHMYRLSIITMLIKD-SRVNRDKCVRIALVHDIAESLVGDITPVDPIGKEEKHRREWETIKYLCNALIKPYNEIAAKEIMDDWLAYENVTSLEARYVKDIDKYE 181 The following BLAST results are available for this feature:
BLAST of FC876425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876425 ID=FC876425; Name=FC876425; organism=Citrus clementina; type=EST; length=662bpback to top |