FC919313

Overview
NameFC919313
Unique NameFC919313
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1457
Libraries
Library NameType
PCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14091 contig Ccv1_Contig14091:1..1457. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC919313 vs. ExPASy Swiss-Prot
Match: CRTI_SOYBN (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Glycine max GN=PDS1 PE=2 SV=1)

HSP 1 Score: 716.842 bits (1849), Expect = 0.000e+0
Identity = 347/423 (82.03%), Postives = 386/423 (91.25%), Query Frame = 1
Query:  190 FSVSESAFNLRYGFRDSEPMGQSLK-IRVKTGTRKGFCPSKVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKVAAWKDGDGNWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSML 1455
            F+ S++  +  +G  DS  MG +L+   ++   R  F P +VVCVDYPRP+++NT NF+EAAYLSS+FR SPRP KPL +VIAGAGLAGLSTAKYLADAGHKP+LLEARDVLGGKVAAWKD DG+WYETGLHIFFGAYP +QNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLP+PLNGI AILRNNEMLTWPEKVKFAIGLLPA++GGQ YVEAQDGL+VQEWM+KQGVP+RV  EVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIV++IQSLGGEV LNSR+QKIELNDDGTVK+FLL NG V++GDAYVFATPVDILKL LP+NWK + YF+RL+KLVGVPVIN+HIWFDRKLKNTYDHLLFSRS LLSVYADMS+TCKEYY+PNQSML
Sbjct:   24 FASSDATISFSFGGSDS--MGLTLRPAPIRAPKRNHFSPLRVVCVDYPRPELENTVNFVEAAYLSSTFRASPRPLKPLNIVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDKDGDWYETGLHIFFGAYPYVQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPSPLNGIWAILRNNEMLTWPEKVKFAIGLLPAMLGGQPYVEAQDGLSVQEWMKKQGVPERVADEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDYIQSLGGEVHLNSRIQKIELNDDGTVKSFLLNNGKVMEGDAYVFATPVDILKLLLPDNWKGIPYFQRLDKLVGVPVINVHIWFDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYSPNQSML 444          
BLAST of FC919313 vs. ExPASy Swiss-Prot
Match: CRTI_SOLLC (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Solanum lycopersicum GN=PDS PE=2 SV=1)

HSP 1 Score: 714.916 bits (1844), Expect = 0.000e+0
Identity = 342/413 (82.81%), Postives = 382/413 (92.49%), Query Frame = 1
Query:  229 FRDSEPMGQSLKIRVKTGTR----KGFCPSKVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKVAAWKDGDGNWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSML 1455
            F  SE MG  LKIR    T     K   P KVVC+DYPRP++DNT N+LEAA+LSS+FR SPRP+KPL++VIAGAGL GLSTAKYLADAGHKP+LLEARDVLGGKVAAWKD DG+WYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMP+KPGEFSRFDF E LPAPLNGILAIL+NNEMLTWPEKVKFAIGLLPA++GGQ+YVEAQDG++V++WMRKQGVPDRVT EVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIVEHI+S GG+VRLNSR++KIELN+DG+VK+F+L++G+ I+GDA+VFA PVDI KL LPE+WKE+ YF++LEKLVGVPVIN+HIWFDRKLKNTYDHLLFSRSSLLSVYADMS+TCKEYYNPNQSML
Sbjct:   45 FAGSESMGHKLKIRTPHATTRRLVKDLGPLKVVCIDYPRPELDNTVNYLEAAFLSSTFRASPRPTKPLEIVIAGAGLGGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDDDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPSKPGEFSRFDFSEALPAPLNGILAILKNNEMLTWPEKVKFAIGLLPAMLGGQSYVEAQDGISVKDWMRKQGVPDRVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVEHIESKGGQVRLNSRIKKIELNEDGSVKSFILSDGSAIEGDAFVFAAPVDIFKLLLPEDWKEIPYFQKLEKLVGVPVINVHIWFDRKLKNTYDHLLFSRSSLLSVYADMSVTCKEYYNPNQSML 457          
BLAST of FC919313 vs. ExPASy Swiss-Prot
Match: CRTI_ARATH (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=PDS PE=2 SV=1)

HSP 1 Score: 712.605 bits (1838), Expect = 0.000e+0
Identity = 340/404 (84.16%), Postives = 381/404 (94.31%), Query Frame = 1
Query:  244 PMGQSLKIRVKTGTRKGFCPSKVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKVAAWKDGDGNWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSML 1455
            P  Q+LK R +  +  G  P +VVCVD PRP+++NT NFLEAA LS+SFR++PRP+KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGK+AAWKD DG+WYETGLHIFFGAYPN+QNLFGELGINDRLQWKEHSMIFAMP+KPGEFSRFDFP+VLPAPLNGI AILRNNEMLTWPEK+KFAIGLLPA++GGQAYVEAQDGL+V+EWM KQGVP+RVT EVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+P+V+HI+SLGGEV+LNSR++KIELNDDGTVK+FLLTNG+ ++GDAYVFA PVDILKL LP+ WKE+ YFK+L+KLVGVPVIN+HIWFDRKLKNTYDHLLFSRS+LLSVYADMSLTCKEYY+PN+SML
Sbjct:   37 PTSQALKTRTRRRSTAG--PLQVVCVDIPRPELENTVNFLEAASLSASFRSAPRPAKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNVQNLFGELGINDRLQWKEHSMIFAMPSKPGEFSRFDFPDVLPAPLNGIWAILRNNEMLTWPEKIKFAIGLLPAMVGGQAYVEAQDGLSVKEWMEKQGVPERVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPVVDHIRSLGGEVQLNSRIKKIELNDDGTVKSFLLTNGSTVEGDAYVFAAPVDILKLLLPDPWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDHLLFSRSNLLSVYADMSLTCKEYYDPNRSML 438          
BLAST of FC919313 vs. ExPASy Swiss-Prot
Match: CRTI_CAPAN (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Capsicum annuum GN=PDS PE=2 SV=1)

HSP 1 Score: 705.671 bits (1820), Expect = 0.000e+0
Identity = 343/435 (78.85%), Postives = 388/435 (89.20%), Query Frame = 1
Query:  163 G*KKKMSLCFSVSESAFNLRYGFRDSEPMGQSLKIR----VKTGTRKGFCPSKVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKVAAWKDGDGNWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSML 1455
            G  ++ SLCF  S+S             M   LKIR    +     K F P KVVC+DYPRP++DNT N+LEAA+LSSSFR+SPRP+KPL++VIAGAGL GLSTAKYLADAGHKP+LLEARDVLGGKVAAWKD DG+WYETGLHIFFGAYPN+QNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPE LPAPLNGILAIL+NNEMLTWPEKVKFAIGLLPA++GGQ+YVEAQDG++V++WMRKQGVPDRVT EVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIVEHI+S GG+VRLNSR++KIELN+DG+VK F+L +G+ I+GDA+VFATPVDI KL LPE+WKE+ YF++LEKLVGVPVIN+HIWFDRKLKNT D+LLFSRS LLSVYADMS+TCKEYY+PN+SML
Sbjct:   35 GCSQRNSLCFGGSDS-------------MSHRLKIRNPHSITRRLAKDFRPLKVVCIDYPRPELDNTVNYLEAAFLSSSFRSSPRPTKPLEIVIAGAGLGGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDDDGDWYETGLHIFFGAYPNMQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEALPAPLNGILAILKNNEMLTWPEKVKFAIGLLPAMLGGQSYVEAQDGISVKDWMRKQGVPDRVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVEHIESKGGQVRLNSRIKKIELNEDGSVKCFILNDGSTIEGDAFVFATPVDIFKLLLPEDWKEIPYFQKLEKLVGVPVINVHIWFDRKLKNTSDNLLFSRSPLLSVYADMSVTCKEYYDPNKSML 456          
BLAST of FC919313 vs. ExPASy Swiss-Prot
Match: CRTI_ORYSJ (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa subsp. japonica GN=PDS PE=2 SV=2)

HSP 1 Score: 693.73 bits (1789), Expect = 0.000e+0
Identity = 331/383 (86.42%), Postives = 361/383 (94.26%), Query Frame = 1
Query:  307 KVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKVAAWKDGDGNWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSML 1455
            +VVC D+PRP ++NT NFLEA  LSS FR S +P+KPL+VVIAGAGLAGLSTAKYLADAGHKP+LLEARDVLGGK+AAWKD DG+WYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPE LPAPLNGI AILRNNEMLTWPEKVKFA+GLLPA++GGQAYVEAQDG TV EWM+KQGVPDRV  EVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIV+H++SLGGEVRLNSR+QKIELN DGTVK+F LT+G  I GDAYVFATPVDILKL +P+ WKE++YFK+LEKLVGVPVIN+HIWFDRKLKNTYDHLLFSRSSLLSVYADMS+TCKEYY+PN+SML
Sbjct:   68 QVVCQDFPRPPLENTINFLEAGQLSSFFRNSEQPTKPLQVVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPETLPAPLNGIWAILRNNEMLTWPEKVKFALGLLPAMVGGQAYVEAQDGFTVSEWMKKQGVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHVRSLGGEVRLNSRIQKIELNPDGTVKHFALTDGTQITGDAYVFATPVDILKLLVPQEWKEISYFKKLEKLVGVPVINVHIWFDRKLKNTYDHLLFSRSSLLSVYADMSVTCKEYYDPNRSML 450          
BLAST of FC919313 vs. ExPASy Swiss-Prot
Match: CRTI_ORYSI (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa subsp. indica GN=PDS1 PE=2 SV=2)

HSP 1 Score: 693.73 bits (1789), Expect = 0.000e+0
Identity = 331/383 (86.42%), Postives = 361/383 (94.26%), Query Frame = 1
Query:  307 KVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKVAAWKDGDGNWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSML 1455
            +VVC D+PRP ++NT NFLEA  LSS FR S +P+KPL+VVIAGAGLAGLSTAKYLADAGHKP+LLEARDVLGGK+AAWKD DG+WYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPE LPAPLNGI AILRNNEMLTWPEKVKFA+GLLPA++GGQAYVEAQDG TV EWM+KQGVPDRV  EVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIV+H++SLGGEVRLNSR+QKIELN DGTVK+F LT+G  I GDAYVFATPVDILKL +P+ WKE++YFK+LEKLVGVPVIN+HIWFDRKLKNTYDHLLFSRSSLLSVYADMS+TCKEYY+PN+SML
Sbjct:   68 QVVCQDFPRPPLENTINFLEAGQLSSFFRNSEQPTKPLQVVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPETLPAPLNGIWAILRNNEMLTWPEKVKFALGLLPAMVGGQAYVEAQDGFTVSEWMKKQGVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHVRSLGGEVRLNSRIQKIELNPDGTVKHFALTDGTQITGDAYVFATPVDILKLLVPQEWKEISYFKKLEKLVGVPVINVHIWFDRKLKNTYDHLLFSRSSLLSVYADMSVTCKEYYDPNRSML 450          
BLAST of FC919313 vs. ExPASy Swiss-Prot
Match: CRTI_NARPS (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=PDS1 PE=1 SV=1)

HSP 1 Score: 687.182 bits (1772), Expect = 0.000e+0
Identity = 333/414 (80.43%), Postives = 373/414 (90.10%), Query Frame = 1
Query:  226 GFRDSEPMGQSLKIRVK--TGTRKG--FCPSKVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKVAAWKDGDGNWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSML 1455
            GFR SE +G  L++ V   +G R+       +VVC D PRP+++   NFLEAA LS+SFR+SPRP K L+VV+ GAGLAGLSTAKYLADAGHKP+LLE+RDVLGGK+AAWKD DG+WYETGLHIFFGAYPN+QNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGI AILRNNEMLTWPEKV+FAIGLLPA++GGQAYVEAQDGLTV EWMR+QGVPDRV  EVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIV+HIQSLGG  +LNSR+QKIELN DGTVK+F+L NGN+I GDAYV A PVDILKL LP+ W+E+ YF++L+KLVGVPVIN+HIWFDRKLKNTYDHLLF+RS LLSVYADMS+TCKEYY+PN+SML
Sbjct:   30 GFRSSECLGIQLQVPVPFYSGIRQSPRATSLQVVCKDCPRPELEGAVNFLEAAQLSASFRSSPRPEKGLEVVVVGAGLAGLSTAKYLADAGHKPILLESRDVLGGKIAAWKDKDGDWYETGLHIFFGAYPNVQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGIWAILRNNEMLTWPEKVRFAIGLLPAMVGGQAYVEAQDGLTVTEWMRRQGVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIQSLGGRAQLNSRLQKIELNPDGTVKHFVLGNGNIITGDAYVVAAPVDILKLLLPQEWREIPYFQKLDKLVGVPVINVHIWFDRKLKNTYDHLLFTRSPLLSVYADMSVTCKEYYDPNRSML 443          
BLAST of FC919313 vs. ExPASy Swiss-Prot
Match: CRTI_MAIZE (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Zea mays GN=PDS1 PE=2 SV=1)

HSP 1 Score: 673.7 bits (1737), Expect = 0.000e+0
Identity = 323/383 (84.33%), Postives = 353/383 (92.17%), Query Frame = 1
Query:  307 KVVCVDYPRPDIDNTSNFLEAAYLSSSFRTSPRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKVAAWKDGDGNWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSML 1455
            +VVC D+PRP +++T N+LEA  LSS FR S RPSKPL+VV+AGAGLAGLSTAKYLADAGHKP+LLEARDVLGGKVAAWKD DG+WYETGLHIFFGAYPNIQNLFGEL I DRLQWKEHSMIFAMPNKPGEFSRFDFPE LPAP+NGI AILRNNEMLTWPEKVKFAIGLLPA++GGQ YVEAQDGLTV EWM+KQGVPDRV  EVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIV+HI+S GGEVRLNSR++KIELN DGTVK+F L++G  I GDAYV ATPVDI KL +P+ W E+ YFK+LEKLVGVPVIN+HIWFDRKL NTYDHLLFSRSSLLSVYADMS+TCKEYY+PN+SML
Sbjct:   60 QVVCKDFPRPPLESTINYLEAGQLSSFFRNSERPSKPLQVVVAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNIQNLFGELRIEDRLQWKEHSMIFAMPNKPGEFSRFDFPETLPAPINGIWAILRNNEMLTWPEKVKFAIGLLPAMVGGQPYVEAQDGLTVSEWMKKQGVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIRSRGGEVRLNSRIKKIELNPDGTVKHFALSDGTQITGDAYVCATPVDIFKLLVPQEWSEITYFKKLEKLVGVPVINVHIWFDRKLNNTYDHLLFSRSSLLSVYADMSVTCKEYYDPNRSML 442          
BLAST of FC919313 vs. ExPASy Swiss-Prot
Match: CRTI_SYNE7 (Phytoene dehydrogenase OS=Synechococcus elongatus (strain PCC 7942) GN=pds PE=3 SV=1)

HSP 1 Score: 473.396 bits (1217), Expect = 1.498e-132
Identity = 233/351 (66.38%), Postives = 279/351 (79.49%), Query Frame = 1
Query:  418 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKVAAWKDGDGNWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-----NGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSML 1455
            ++V IAGAGLAGLS AKYLADAGH P++ E RDVLGGKVAAWKD DG+WYETGLHIFFGAYPN+  LF EL I DRLQWK HSMIF  P KPG +SRFDFP++ PAP+NG+ AIL NN+MLTW EK+KF +GLLPA+I GQ+YVE  D  +  EW+RKQ +P+RV  EVFIAM+KALNFI+PDE+S   +L ALNRFLQEK GS MAFLDG PPERLC PIVEH+Q+ GG+V LN+ +++  LNDD +V+ F +         +I+ DAYV A PVD LKL LP+ WK M YF++L+ L GVPVINIH+WFDRKL +  DHLLFSRS LLSVYADMS TC+EY +P++SML
Sbjct:    1 MRVAIAGAGLAGLSCAKYLADAGHTPIVYERRDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNMLQLFKELNIEDRLQWKSHSMIFNQPTKPGTYSRFDFPDI-PAPINGVAAILSNNDMLTWEEKIKFGLGLLPAMIRGQSYVEEMDQYSWTEWLRKQNIPERVNDEVFIAMAKALNFIDPDEISATVVLTALNRFLQEKKGSMMAFLDGAPPERLCQPIVEHVQARGGDVLLNAPLKEFVLNDDSSVQAFRIAGIKGQEEQLIEADAYVSALPVDPLKLLLPDAWKAMPYFQQLDGLQGVPVINIHLWFDRKLTD-IDHLLFSRSPLLSVYADMSNTCREYEDPDRSML 349          
BLAST of FC919313 vs. ExPASy Swiss-Prot
Match: CRTI_SYNY3 (Phytoene dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=pds PE=3 SV=2)

HSP 1 Score: 470.7 bits (1210), Expect = 9.710e-132
Identity = 230/351 (65.53%), Postives = 279/351 (79.49%), Query Frame = 1
Query:  418 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKVAAWKDGDGNWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN-----GNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSML 1455
            ++VVIAGAGLAGL+ AKYLADAG  P++LE RDVLGGK+AAWKD DG+WYETGLHIFFGAYPN+  LF EL I DRLQWKEHSMIF  P KPG +SRFDFP++ PAP+NG++AILRNN+MLTWPEK++F +GLLPAI+ GQ+YVE  D  T  EWM KQ +P R+  EVFIAMSKALNFI+PDE+S   +L ALNRFLQEK+GSKMAFLDG PPERLC P+V++I   GGEV +N  +++I LN+DG+VK +L+         VI  D YV A PVD LK  +P  W+E   FK+++ L GVPVIN+H+WFDRKL +  DHLLFSRS LLSVYADMS TC+EY +P++SML
Sbjct:    1 MRVVIAGAGLAGLACAKYLADAGFTPVVLERRDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNMLQLFKELDIEDRLQWKEHSMIFNQPEKPGTYSRFDFPDI-PAPINGLVAILRNNDMLTWPEKIRFGLGLLPAIVQGQSYVEEMDKYTWSEWMAKQNIPPRIEKEVFIAMSKALNFIDPDEISATILLTALNRFLQEKNGSKMAFLDGAPPERLCQPLVDYITERGGEVHINKPLKEILLNEDGSVKGYLIRGLDGAPDEVITADLYVSAMPVDPLKTMVPAPWREYPEFKQIQGLEGVPVINLHLWFDRKLTD-IDHLLFSRSPLLSVYADMSNTCREYSDPDKSML 349          
The following BLAST results are available for this feature:
BLAST of FC919313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
CRTI_SOYBN0.000e+082.03Phytoene dehydrogenase, chloroplastic/chromoplasti... [more]
CRTI_SOLLC0.000e+082.81Phytoene dehydrogenase, chloroplastic/chromoplasti... [more]
CRTI_ARATH0.000e+084.16Phytoene dehydrogenase, chloroplastic/chromoplasti... [more]
CRTI_CAPAN0.000e+078.85Phytoene dehydrogenase, chloroplastic/chromoplasti... [more]
CRTI_ORYSJ0.000e+086.42Phytoene dehydrogenase, chloroplastic/chromoplasti... [more]
CRTI_ORYSI0.000e+086.42Phytoene dehydrogenase, chloroplastic/chromoplasti... [more]
CRTI_NARPS0.000e+080.43Phytoene dehydrogenase, chloroplastic/chromoplasti... [more]
CRTI_MAIZE0.000e+084.33Phytoene dehydrogenase, chloroplastic/chromoplasti... [more]
CRTI_SYNE71.498e-13266.38Phytoene dehydrogenase OS=Synechococcus elongatus ... [more]
CRTI_SYNY39.710e-13265.53Phytoene dehydrogenase OS=Synechocystis sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionC06055B03T7 PCR Citrus clementina cDNA clone C06055B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC919313 ID=FC919313; Name=FC919313; organism=Citrus clementina; type=EST; length=1457bp
TTTTTTTTTTTTTTTTCTTTCTTTTTTGCTCTCTGCTGAGTTCAGATGAC
TAACTAGTAATCTAAAATCATTTTTATTGCTTTCAAACGCGAAATTAATT
CAACTTAATTTTGTTGGTTTCACTGTTGTCATTGTTTGGTCTTCAGTTTG
ATAAATTAAAAAGGTTAAAAAAAAAAGATGAGCCTTTGCTTCAGCGTTTC
TGAAAGTGCTTTCAACTTGCGATATGGTTTCCGAGATAGTGAACCGATGG
GTCAGAGCCTGAAAATTCGAGTTAAAACGGGGACAAGGAAGGGTTTCTGT
CCTTCGAAGGTGGTTTGTGTGGACTACCCAAGACCAGATATTGATAATAC
ATCTAATTTCTTGGAAGCTGCTTACTTGTCTTCGTCATTTCGTACTTCTC
CTCGTCCTTCTAAGCCGTTGAAAGTTGTAATTGCTGGTGCAGGTTTGGCT
GGTTTATCAACTGCAAAATATTTGGCAGATGCAGGCCACAAGCCTTTGTT
ACTGGAAGCAAGAGATGTTCTAGGTGGAAAGGTAGCTGCCTGGAAAGATG
GGGACGGGAACTGGTATGAGACAGGCCTTCATATTTTCTTCGGGGCTTAC
CCAAATATACAGAACCTGTTTGGAGAACTTGGTATTAATGATCGGTTGCA
GTGGAAGGAGCACTCTATGATTTTTGCAATGCCAAACAAGCCCGGAGAAT
TCAGCCGATTTGATTTTCCTGAAGTTCTTCCGGCTCCGCTAAATGGGATA
TTGGCCATTTTAAGGAATAATGAAATGCTGACTTGGCCGGAGAAAGTGAA
GTTTGCAATTGGACTGCTTCCAGCAATAATTGGCGGACAGGCATATGTTG
AAGCTCAAGATGGTTTAACTGTTCAGGAGTGGATGAGAAAGCAGGGTGTA
CCTGATCGAGTGACGACAGAGGTGTTTATTGCCATGTCAAAGGCACTAAA
CTTCATAAACCCTGATGAACTGTCAATGCAATGTATATTGATTGCCTTAA
ACCGATTTCTTCAGGAGAAGCATGGTTCGAAGATGGCATTCTTAGATGGC
AACCCCCCAGAGAGACTTTGCTTGCCTATTGTTGAACACATTCAGTCACT
GGGTGGTGAAGTCCGGCTTAATTCCCGAGTTCAGAAAATTGAGCTCAATG
ATGATGGAACTGTGAAGAATTTTTTACTAACTAATGGCAATGTGATTGAC
GGAGATGCTTATGTATTTGCCACACCTGTTGATATCCTCAAGCTTCAGTT
ACCTGAAAACTGGAAAGAGATGGCATACTTCAAGAGATTAGAGAAATTGG
TGGGAGTTCCAGTCATCAACATCCACATATGGTTTGACAGGAAATTGAAA
AACACTTATGATCACCTACTCTTTAGCAGAAGTTCCCTTCTAAGTGTGTA
TGCCGACATGTCTTTAACTTGTAAGGAGTATTACAACCCCAATCAATCCA
TGCTGCA
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