FC919316
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC919316 vs. ExPASy Swiss-Prot
Match: LCYB_SOLLC (Lycopene beta cyclase, chloroplastic OS=Solanum lycopersicum GN=LCY1 PE=2 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 2.238e-67 Identity = 120/139 (86.33%), Postives = 127/139 (91.37%), Query Frame = 3 Query: 3 RQVSXAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLNRPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIXAAVVLDATGFSMCLVQYDKPYNSSYQ 419 +QVS AGLSVCSIDP+PKLIWPNNYGVWVDEFEAMDLLDCLD TWSGA V+IDDNT KDL+RPYGRVNRK LKSKM+QKCI NGVKFHQAKVIKVIHEESKS+LICNDG+TI A VVLDATGFS LVQYDKPYN YQ Sbjct: 100 QQVSEAGLSVCSIDPNPKLIWPNNYGVWVDEFEAMDLLDCLDATWSGAAVYIDDNTAKDLHRPYGRVNRKQLKSKMMQKCIMNGVKFHQAKVIKVIHEESKSMLICNDGITIQATVVLDATGFSRSLVQYDKPYNPGYQ 238
BLAST of FC919316 vs. ExPASy Swiss-Prot
Match: LCYB_CAPAN (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Capsicum annuum GN=LCY1 PE=2 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 2.923e-67 Identity = 120/139 (86.33%), Postives = 126/139 (90.65%), Query Frame = 3 Query: 3 RQVSXAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLNRPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIXAAVVLDATGFSMCLVQYDKPYNSSYQ 419 +QVS AGLSVCSIDP+PKLIWPNNYGVWVDEFEAMDLLDCLD TWSGA V+IDD T KDLNRPYGRVNRK LKSKM+QKCI NGVKFHQAKVIKVIHEESKS+LICNDG+TI A VVLDATGFS LVQYDKPYN YQ Sbjct: 98 QQVSEAGLSVCSIDPNPKLIWPNNYGVWVDEFEAMDLLDCLDATWSGAAVYIDDKTTKDLNRPYGRVNRKQLKSKMMQKCILNGVKFHQAKVIKVIHEESKSMLICNDGITIQATVVLDATGFSRSLVQYDKPYNPGYQ 236
BLAST of FC919316 vs. ExPASy Swiss-Prot
Match: LCYB_TOBAC (Lycopene beta cyclase, chloroplastic OS=Nicotiana tabacum GN=LCY1 PE=2 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 3.231e-66 Identity = 119/139 (85.61%), Postives = 125/139 (89.93%), Query Frame = 3 Query: 3 RQVSXAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLNRPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIXAAVVLDATGFSMCLVQYDKPYNSSYQ 419 +QVS AGLSV SIDPSPKLIWPNNYGVWVDEFEAMDLLDCLD TWSG VV+IDDNT KDL+RPYGRVNRK LKSKM+QKCI NGVKFH AKVIKVIHEE+KS+LICNDGVTI A VVLDATGFS CLVQYDKPY YQ Sbjct: 100 QQVSEAGLSVVSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDATWSGTVVYIDDNTTKDLDRPYGRVNRKQLKSKMMQKCILNGVKFHHAKVIKVIHEEAKSMLICNDGVTIQATVVLDATGFSRCLVQYDKPYKPGYQ 238
BLAST of FC919316 vs. ExPASy Swiss-Prot
Match: LCYB_ARATH (Lycopene beta cyclase, chloroplastic OS=Arabidopsis thaliana GN=LCY1 PE=2 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 2.735e-65 Identity = 114/139 (82.01%), Postives = 126/139 (90.65%), Query Frame = 3 Query: 3 RQVSXAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLNRPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIXAAVVLDATGFSMCLVQYDKPYNSSYQ 419 +QVS AGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVV++D+ KKDL+RPYGRVNRK LKSKMLQKCITNGVKFHQ+KV V+HEE+ S ++C+DGV I A+VVLDATGFS CLVQYDKPYN YQ Sbjct: 99 QQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYVDEGVKKDLSRPYGRVNRKQLKSKMLQKCITNGVKFHQSKVTNVVHEEANSTVVCSDGVKIQASVVLDATGFSRCLVQYDKPYNPGYQ 237
BLAST of FC919316 vs. ExPASy Swiss-Prot
Match: LCYB_NARPS (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=LCY1 PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 1.113e-58 Identity = 102/133 (76.69%), Postives = 117/133 (87.97%), Query Frame = 3 Query: 21 GLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLNRPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIXAAVVLDATGFSMCLVQYDKPYNSSYQ 419 GLSV SIDP+PKLIWPNNYGVWVDEFE MDLLDCLD TWSGA+V++DD + K+L+RPY RVNRK LKSKM++KC++NGV+FHQA V+K +HEE KS LIC+DGVTI A VVLDATGFS CLVQYDKPYN YQ Sbjct: 109 GLSVVSIDPNPKLIWPNNYGVWVDEFEDMDLLDCLDATWSGAIVYVDDRSTKNLSRPYARVNRKNLKSKMMKKCVSNGVRFHQATVVKAMHEEEKSYLICSDGVTIDARVVLDATGFSRCLVQYDKPYNPGYQ 241
BLAST of FC919316 vs. ExPASy Swiss-Prot
Match: CCS_CAPAN (Capsanthin/capsorubin synthase, chromoplast OS=Capsicum annuum GN=CCS PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.615e-41 Identity = 75/138 (54.35%), Postives = 101/138 (73.19%), Query Frame = 3 Query: 6 QVSXAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLNRPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIXAAVVLDATGFSMCLVQYDKPYNSSYQ 419 QVS G+ VC +DPSP +WPNNYGVWVDEFE + L DCLD W + VHI D+ K L+RPYGRV+RK LK K+L C+ N VKF++AKV+KV HEE +S ++C+DG I ++++DA+G++ ++YDKP N YQ Sbjct: 99 QVSKYGIKVCCVDPSPLSMWPNNYGVWVDEFEKLGLEDCLDHKWPVSCVHISDHKTKYLDRPYGRVSRKKLKLKLLNSCVENRVKFYKAKVLKVKHEEFESSIVCDDGRKISGSLIVDASGYASDFIEYDKPRNHGYQ 236
BLAST of FC919316 vs. ExPASy Swiss-Prot
Match: CCS_CITSI (Capsanthin/capsorubin synthase, chromoplast OS=Citrus sinensis GN=CCS PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 2.755e-41 Identity = 74/136 (54.41%), Postives = 101/136 (74.26%), Query Frame = 3 Query: 12 SXAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLNRPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIXAAVVLDATGFSMCLVQYDKPYNSSYQ 419 S + VC +DPSP WPNNYGVWVDEFE + L+DCLD TW V I+D+ K L+RPYGRV+R +LK+K+L+ C++NGVKFH+AKV V H+E +S ++C+DG I A++++DA+GF+ V+YDKP N YQ Sbjct: 106 SRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRPYGRVSRNILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSFVEYDKPRNHGYQ 241
BLAST of FC919316 vs. ExPASy Swiss-Prot
Match: NXS_SOLTU (Neoxanthin synthase, chloroplastic OS=Solanum tuberosum GN=NXS PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 2.332e-40 Identity = 75/137 (54.74%), Postives = 98/137 (71.53%), Query Frame = 3 Query: 9 VSXAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLNRPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIXAAVVLDATGFSMCLVQYDKPYNSSYQ 419 VS G+ VC +DPSP +WPNNYGVWVDEFE + L DCLD W VHI+D+ K L RPYGRV+RK LK ++L C+ N VKF++AKV KV HEE +S ++C+DG I ++V+DA+GF+ ++YDKP N YQ Sbjct: 100 VSKYGIKVCCVDPSPLSMWPNNYGVWVDEFENLGLEDCLDHKWPMTCVHINDHKTKYLGRPYGRVSRKKLKLRLLNSCVENRVKFYKAKVWKVEHEEFESSIVCDDGKKIRGSLVVDASGFASDFIEYDKPRNHGYQ 236
BLAST of FC919316 vs. ExPASy Swiss-Prot
Match: LCYE_ARATH (Lycopene epsilon cyclase, chloroplastic OS=Arabidopsis thaliana GN=LUT2 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.522e-15 Identity = 41/117 (35.04%), Postives = 68/117 (58.12%), Query Frame = 3 Query: 51 PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLNRPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIH-EESKSLLICNDGVTIXAAVVLDATG-FSMCLVQYD 395 P L + NNYGVW DEF + L C++ W +V++DD+ + R YGRV+R+LL ++L++C+ +GV + +KV + + L+ C+D I + A+G S L+QY+ Sbjct: 139 PDLPFTNNYGVWEDEFNDLGLQKCIEHVWRETIVYLDDDKPITIGRAYGRVSRRLLHEELLRRCVESGVSYLSSKVDSITEASDGLRLVACDDNNVIPCRLATVASGAASGKLLQYE 255
BLAST of FC919316 vs. ExPASy Swiss-Prot
Match: LCYE_SOLLC (Lycopene epsilon cyclase, chloroplastic OS=Solanum lycopersicum GN=CRTL-E-1 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.288e-14 Identity = 38/107 (35.51%), Postives = 62/107 (57.94%), Query Frame = 3 Query: 51 PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVHIDDNTKKDLNRPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIH-EESKSLLICNDGVTIXAAVVLDATG 368 P L + NNYGVW DEF+ + L C++ W +V++DD+ + R YGRV+R L ++L++C+ GV + +KV +++ +SL+ C V I V A+G Sbjct: 136 PDLPFTNNYGVWEDEFKDLGLQACIEHVWRDTIVYLDDDEPILIGRAYGRVSRHFLHEELLKRCVEAGVLYLNSKVDRIVEATNGQSLVECEGDVVIPCRFVTVASG 242 The following BLAST results are available for this feature:
BLAST of FC919316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC919316 ID=FC919316; Name=FC919316; organism=Citrus clementina; type=EST; length=443bpback to top |